RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	GRX1	P25373	110 aa	Known RBP	4.79	□□□□□ -1.64
PMI40	YER003C	MCM5	P29496	775 aa	Known RBP	4.79	□□□□□ -1.64
PMI40	YER003C	KNS1	P32350	737 aa	Predicted RBP	4.79	□□□□□ -1.64
PMI40	YER003C	FPR3	P38911	411 aa	Known RBP	4.79	□□□□□ -1.64
PMI40	YER003C	TAT2	P38967	592 aa		4.79	□□□□□ -1.64
PMI40	YER003C	BUD6	P41697	788 aa		4.79	□□□□□ -1.64
PMI40	YER003C	NUT1	P53114	1132 aa		4.79	□□□□□ -1.64
PMI40	YER003C	YNR014W	P53719	212 aa		4.79	□□□□□ -1.64
PMI40	YER003C	ULP1	Q02724	621 aa		4.79	□□□□□ -1.64
PMI40	YER003C	CDC53	Q12018	815 aa	Known RBP	4.79	□□□□□ -1.64
PMI40	YER003C	GPM1	P00950	247 aa	Known RBP	4.78	□□□□□ -1.64
PMI40	YER003C	FUS1	P11710	512 aa		4.78	□□□□□ -1.64
PMI40	YER003C	PDC5	P16467	563 aa	Known RBP	4.78	□□□□□ -1.64
PMI40	YER003C	PYC2	P32327	1180 aa	Known RBP	4.78	□□□□□ -1.64
PMI40	YER003C	DUT1	P33317	147 aa		4.78	□□□□□ -1.64
PMI40	YER003C	FAA4	P47912	694 aa	Known RBP	4.78	□□□□□ -1.64
PMI40	YER003C	ALG12	P53730	551 aa		4.78	□□□□□ -1.64
PMI40	YER003C	BDF2	Q07442	638 aa		4.78	□□□□□ -1.64
PMI40	YER003C	RTT10	Q08924	1013 aa		4.78	□□□□□ -1.64
PMI40	YER003C	COB	P00163	385 aa		4.77	□□□□□ -1.65
PMI40	YER003C	YCK2	P23292	546 aa	Known RBP	4.77	□□□□□ -1.65
PMI40	YER003C	PIC2	P40035	300 aa		4.77	□□□□□ -1.65
PMI40	YER003C	SAP155	P43612	1002 aa		4.77	□□□□□ -1.65
PMI40	YER003C	OPI10	Q08202	246 aa		4.77	□□□□□ -1.65
PMI40	YER003C	TMA46	Q12000	345 aa	Known RBP	4.77	□□□□□ -1.65
PMI40	YER003C	GCR1	P07261	785 aa		4.76	□□□□□ -1.65
PMI40	YER003C	UGA4	P32837	571 aa		4.76	□□□□□ -1.65
PMI40	YER003C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
PMI40	YER003C	INP51	P40559	946 aa	Known RBP	4.76	□□□□□ -1.65
PMI40	YER003C	YJL181W	P46987	611 aa		4.76	□□□□□ -1.65
PMI40	YER003C	MON1	P53129	644 aa		4.76	□□□□□ -1.65
PMI40	YER003C	PMT7	Q06644	662 aa		4.76	□□□□□ -1.65
PMI40	YER003C	TAF13	P11747	167 aa		4.75	□□□□□ -1.65
PMI40	YER003C	DUR3	P33413	735 aa		4.75	□□□□□ -1.65
PMI40	YER003C	SLN1	P39928	1220 aa	Predicted RBP	4.75	□□□□□ -1.65
PMI40	YER003C	SPF1	P39986	1215 aa	Known RBP	4.75	□□□□□ -1.65
PMI40	YER003C	LEM3	P42838	414 aa		4.75	□□□□□ -1.65
PMI40	YER003C	HUL5	P53119	910 aa		4.75	□□□□□ -1.65
PMI40	YER003C	GUP1	P53154	560 aa		4.75	□□□□□ -1.65
PMI40	YER003C	BIO5	P53744	561 aa	Known RBP	4.75	□□□□□ -1.65
PMI40	YER003C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
PMI40	YER003C	NAN1	Q02931	896 aa	Known RBP	4.75	□□□□□ -1.65
PMI40	YER003C	TDA5	Q06417	326 aa	Known RBP	4.75	□□□□□ -1.65
PMI40	YER003C	MCA1	Q08601	432 aa		4.75	□□□□□ -1.65
PMI40	YER003C	SOG2	Q08817	791 aa		4.75	□□□□□ -1.65
PMI40	YER003C	SLP1	Q12232	587 aa		4.75	□□□□□ -1.65
PMI40	YER003C	MCX1	P38323	520 aa	Predicted RBP	4.74	□□□□□ -1.65
PMI40	YER003C	RAD4	P14736	754 aa		4.73	□□□□□ -1.65
PMI40	YER003C	PRI2	P20457	528 aa		4.73	□□□□□ -1.65
PMI40	YER003C	PRP5	P21372	849 aa	Predicted RBP	4.73	□□□□□ -1.65
PMI40	YER003C	RAD27	P26793	382 aa		4.73	□□□□□ -1.65
PMI40	YER003C	SQT1	P35184	431 aa		4.73	□□□□□ -1.65
PMI40	YER003C	ALG14	P38242	237 aa		4.73	□□□□□ -1.65
PMI40	YER003C	RIM11	P38615	370 aa		4.73	□□□□□ -1.65
PMI40	YER003C	KRI1	P42846	591 aa	Known RBP	4.73	□□□□□ -1.65
PMI40	YER003C	RSM26	P47141	266 aa		4.73	□□□□□ -1.65
PMI40	YER003C	NOG1	Q02892	647 aa	Known RBP	4.73	□□□□□ -1.65
PMI40	YER003C	GIS4	Q04233	774 aa		4.73	□□□□□ -1.65
PMI40	YER003C	PPM2	Q08282	695 aa		4.73	□□□□□ -1.65
PMI40	YER003C	YDR215C	Q12240	137 aa		4.73	□□□□□ -1.65
PMI40	YER003C	GLO4	Q12320	285 aa		4.73	□□□□□ -1.65
PMI40	YER003C	MRP10	O75012	95 aa		4.72	□□□□□ -1.65
PMI40	YER003C	SEC23	P15303	768 aa	Known RBP	4.72	□□□□□ -1.65
PMI40	YER003C	BOI2	P39969	1040 aa		4.72	□□□□□ -1.65
PMI40	YER003C	CHZ1	P40019	153 aa	Predicted RBP	4.72	□□□□□ -1.65
PMI40	YER003C	GNP1	P48813	663 aa		4.72	□□□□□ -1.65
PMI40	YER003C	EEB1	Q02891	456 aa		4.72	□□□□□ -1.65
PMI40	YER003C	POB3	Q04636	552 aa	Known RBP	4.72	□□□□□ -1.65
PMI40	YER003C	MRL1	Q06815	381 aa		4.72	□□□□□ -1.65
PMI40	YER003C	FAL1	Q12099	399 aa	Known RBP	4.72	□□□□□ -1.65
PMI40	YER003C	NHA1	Q99271	985 aa		4.72	□□□□□ -1.65
PMI40	YER003C	MET6	P05694	767 aa	Known RBP	4.71	□□□□□ -1.66
PMI40	YER003C	HVG1	P0CE11	249 aa		4.71	□□□□□ -1.66
PMI40	YER003C	NPR1	P22211	790 aa		4.71	□□□□□ -1.66
PMI40	YER003C	NAR1	P23503	491 aa	Known RBP	4.71	□□□□□ -1.66
PMI40	YER003C	YKL069W	P36088	180 aa		4.71	□□□□□ -1.66
PMI40	YER003C	TFA2	P36145	328 aa		4.71	□□□□□ -1.66
PMI40	YER003C	PGM2	P37012	569 aa	Known RBP	4.71	□□□□□ -1.66
PMI40	YER003C	AMN1	P38285	549 aa	Predicted RBP	4.71	□□□□□ -1.66
PMI40	YER003C	PEX28	P38848	579 aa		4.71	□□□□□ -1.66
PMI40	YER003C	SHU2	P38957	223 aa		4.71	□□□□□ -1.66
PMI40	YER003C	NUP82	P40368	713 aa		4.71	□□□□□ -1.66
PMI40	YER003C	FET4	P40988	552 aa		4.71	□□□□□ -1.66
PMI40	YER003C	XKS1	P42826	600 aa		4.71	□□□□□ -1.66
PMI40	YER003C	TIM54	P47045	478 aa		4.71	□□□□□ -1.66
PMI40	YER003C	YJR124C	P47159	448 aa		4.71	□□□□□ -1.66
PMI40	YER003C	ENT3	P47160	408 aa		4.71	□□□□□ -1.66
PMI40	YER003C	YGL140C	P53120	1219 aa		4.71	□□□□□ -1.66
PMI40	YER003C	TYW3	P53177	273 aa		4.71	□□□□□ -1.66
PMI40	YER003C	CMR1	Q12510	522 aa	Known RBP	4.71	□□□□□ -1.66
PMI40	YER003C	BAS1	P22035	811 aa		4.7	□□□□□ -1.66
PMI40	YER003C	AGP1	P25376	633 aa		4.7	□□□□□ -1.66
PMI40	YER003C	YHR020W	P38708	688 aa	Known RBP	4.7	□□□□□ -1.66
PMI40	YER003C	GIP2	P40036	548 aa		4.7	□□□□□ -1.66
PMI40	YER003C	SOK2	P53438	785 aa	Predicted RBP	4.7	□□□□□ -1.66
PMI40	YER003C	UTP14	Q04500	899 aa	Known RBP	4.7	□□□□□ -1.66
PMI40	YER003C	SPO75	Q07798	868 aa		4.7	□□□□□ -1.66
PMI40	YER003C	NEO1	P40527	1151 aa		4.69	□□□□□ -1.66
PMI40	YER003C	LSB6	P42951	607 aa		4.69	□□□□□ -1.66
PMI40	YER003C	YNR065C	P53751	1116 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms