RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W DCS2Q12123 353 aa8.83□□□□□ -1
NDE2YDL085W CHO2P05374 869 aaKnown RBP8.82□□□□□ -1
NDE2YDL085W RNR3P21672 869 aaKnown RBP8.82□□□□□ -1
NDE2YDL085W MAK31P23059 88 aa8.82□□□□□ -1
NDE2YDL085W BMH1P29311 267 aaKnown RBP8.82□□□□□ -1
NDE2YDL085W GLN1P32288 370 aaKnown RBP8.82□□□□□ -1
NDE2YDL085W RXT2P38255 430 aa8.82□□□□□ -1
NDE2YDL085W ERO1Q03103 563 aa8.82□□□□□ -1
NDE2YDL085W HCR1Q05775 265 aaKnown RBP8.82□□□□□ -1
NDE2YDL085W CSC1Q06538 782 aa8.82□□□□□ -1
NDE2YDL085W YPL260WQ08977 551 aa8.82□□□□□ -1
NDE2YDL085W CLF1Q12309 687 aaPredicted RBP8.82□□□□□ -1
NDE2YDL085W MRC1P25588 1096 aa8.81□□□□□ -1
NDE2YDL085W UGA2P38067 497 aa8.81□□□□□ -1
NDE2YDL085W NAF1P53919 492 aaKnown RBP8.81□□□□□ -1
NDE2YDL085W COG4Q06096 861 aa8.81□□□□□ -1
NDE2YDL085W YCG1Q06680 1035 aa8.81□□□□□ -1
NDE2YDL085W WRS1Q12109 432 aaKnown RBP8.81□□□□□ -1
NDE2YDL085W TIP41Q12199 356 aa8.81□□□□□ -1
NDE2YDL085W RAD61Q99359 647 aa8.81□□□□□ -1
NDE2YDL085W PES4P39684 611 aa8.8□□□□□ -1
NDE2YDL085W TIF4632P39936 914 aaKnown RBP8.8□□□□□ -1
NDE2YDL085W TOS4Q06266 489 aa8.8□□□□□ -1
NDE2YDL085W CDC6P09119 513 aa8.8□□□□□ -1
NDE2YDL085W RPT3P33298 428 aaKnown RBP8.8□□□□□ -1
NDE2YDL085W APL6P46682 809 aa8.8□□□□□ -1
NDE2YDL085W SMC3P47037 1230 aa8.8□□□□□ -1
NDE2YDL085W GFD1Q04839 188 aaKnown RBP8.8□□□□□ -1
NDE2YDL085W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.8□□□□□ -1not detected
NDE2YDL085W RIT1P23796 513 aa8.79□□□□□ -1
NDE2YDL085W MCM4P30665 933 aaKnown RBP8.79□□□□□ -1
NDE2YDL085W SAC6P32599 642 aaKnown RBP8.79□□□□□ -1
NDE2YDL085W SAP190P36123 1033 aa8.79□□□□□ -1
NDE2YDL085W ADE17P38009 592 aaKnown RBP8.79□□□□□ -1
NDE2YDL085W PCI8P40512 444 aa8.79□□□□□ -1
NDE2YDL085W VPS75P53853 264 aa8.79□□□□□ -1
NDE2YDL085W GRX6Q12438 231 aa8.79□□□□□ -1
NDE2YDL085W SNF3P10870 884 aa8.78□□□□□ -1
NDE2YDL085W URA1P28272 314 aaPredicted RBP8.78□□□□□ -1
NDE2YDL085W TOM71P38825 639 aaKnown RBP8.78□□□□□ -1
NDE2YDL085W OSW7P43611 510 aa8.78□□□□□ -1
NDE2YDL085W YGR130CP53278 816 aa8.78□□□□□ -1
NDE2YDL085W RPT6Q01939 405 aaKnown RBP8.78□□□□□ -1
NDE2YDL085W MYO5Q04439 1219 aaKnown RBP8.78□□□□□ -1
NDE2YDL085W YDR341CQ05506 607 aaKnown RBP8.78□□□□□ -1
NDE2YDL085W MMR1Q06324 491 aa8.78□□□□□ -1
NDE2YDL085W YOR296WQ08748 1289 aa8.78□□□□□ -1
NDE2YDL085W YHL050CP38721 697 aa8.77□□□□□ -1.01
NDE2YDL085W VPS8P39702 1274 aa8.77□□□□□ -1.01
NDE2YDL085W VID27P40157 782 aa8.77□□□□□ -1.01
NDE2YDL085W PRP31P49704 494 aaPredicted RBP8.77□□□□□ -1.01
NDE2YDL085W PRP42Q03776 544 aaKnown RBP8.77□□□□□ -1.01
NDE2YDL085W ACK1Q07622 623 aaPredicted RBP8.77□□□□□ -1.01
NDE2YDL085W TFC8Q12308 588 aa8.77□□□□□ -1.01
NDE2YDL085W YOR111WQ99210 232 aa8.77□□□□□ -1.01
NDE2YDL085W CAF20P12962 161 aaKnown RBP8.76□□□□□ -1.01
NDE2YDL085W ALG1P16661 449 aa8.76□□□□□ -1.01
NDE2YDL085W PET123P17558 318 aa8.76□□□□□ -1.01
NDE2YDL085W CDC15P27636 974 aa8.76□□□□□ -1.01
NDE2YDL085W PSY4P38193 441 aa8.76□□□□□ -1.01
NDE2YDL085W RAD26P40352 1085 aa8.76□□□□□ -1.01
NDE2YDL085W PTK2P47116 818 aaKnown RBP8.76□□□□□ -1.01
NDE2YDL085W HDA1P53973 706 aa8.76□□□□□ -1.01
NDE2YDL085W EIS1Q05050 843 aaKnown RBP8.76□□□□□ -1.01
NDE2YDL085W PMD1P32634 1753 aa8.76□□□□□ -1.01
NDE2YDL085W HKR1P41809 1802 aa8.76□□□□□ -1.01
NDE2YDL085W MET6P05694 767 aaKnown RBP8.76□□□□□ -1.01
NDE2YDL085W SEC20P28791 383 aa8.76□□□□□ -1.01
NDE2YDL085W RPL8BP29453 256 aaKnown RBP8.76□□□□□ -1.01
NDE2YDL085W YKL222CP35995 705 aa8.76□□□□□ -1.01
NDE2YDL085W YBL086CP38177 466 aa8.76□□□□□ -1.01
NDE2YDL085W YGL138CP53122 345 aa8.76□□□□□ -1.01
NDE2YDL085W PUS6P53294 404 aa8.76□□□□□ -1.01
NDE2YDL085W CIT1P00890 479 aa8.75□□□□□ -1.01
NDE2YDL085W ARG82P07250 355 aa8.75□□□□□ -1.01
NDE2YDL085W VPS1P21576 704 aaKnown RBP8.75□□□□□ -1.01
NDE2YDL085W CSM2P40465 213 aa8.75□□□□□ -1.01
NDE2YDL085W APL4Q12028 832 aa8.75□□□□□ -1.01
NDE2YDL085W NOP14Q99207 810 aaKnown RBP8.75□□□□□ -1.01
NDE2YDL085W HIS4P00815 799 aaKnown RBP8.74□□□□□ -1.01
NDE2YDL085W PHO13P19881 312 aa8.74□□□□□ -1.01
NDE2YDL085W STE11P23561 717 aa8.74□□□□□ -1.01
NDE2YDL085W SMY1P32364 656 aaKnown RBP8.74□□□□□ -1.01
NDE2YDL085W CAJ1P39101 391 aa8.74□□□□□ -1.01
NDE2YDL085W MGA2P40578 1113 aa8.74□□□□□ -1.01
NDE2YDL085W DAK2P43550 591 aa8.74□□□□□ -1.01
NDE2YDL085W FYV8P46949 817 aaKnown RBP8.74□□□□□ -1.01
NDE2YDL085W TMA16Q08687 178 aa8.74□□□□□ -1.01
NDE2YDL085W KEL3Q08979 651 aaPredicted RBP8.74□□□□□ -1.01
NDE2YDL085W GIN4Q12263 1142 aa8.74□□□□□ -1.01
NDE2YDL085W THR4P16120 514 aaKnown RBP8.73□□□□□ -1.01
NDE2YDL085W RET1P22276 1149 aaKnown RBP8.73□□□□□ -1.01
NDE2YDL085W HIR1P32479 840 aa8.73□□□□□ -1.01
NDE2YDL085W SAS3P34218 831 aa8.73□□□□□ -1.01
NDE2YDL085W ERT1P38140 529 aa8.73□□□□□ -1.01
NDE2YDL085W BCD1P38772 366 aa8.73□□□□□ -1.01
NDE2YDL085W CCT3P39077 534 aaKnown RBP8.73□□□□□ -1.01
NDE2YDL085W STR2P47164 639 aa8.73□□□□□ -1.01
NDE2YDL085W APT1P49435 187 aaKnown RBP8.73□□□□□ -1.01
NDE2YDL085W UTP13Q05946 817 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 88 ms