RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W THI80P35202 319 aa3.69□□□□□ -1.82
MCD1YDL003W LEO1P38439 464 aa3.69□□□□□ -1.82
MCD1YDL003W UTP22P53254 1237 aaPredicted RBP3.69□□□□□ -1.82
MCD1YDL003W ORC3P54790 616 aa3.69□□□□□ -1.82
MCD1YDL003W AVO1Q08236 1176 aa3.69□□□□□ -1.82
MCD1YDL003W PRP6P19735 899 aaPredicted RBP3.68□□□□□ -1.82
MCD1YDL003W EAR1Q03212 550 aa3.68□□□□□ -1.82
MCD1YDL003W NOB1Q08444 459 aaKnown RBP3.68□□□□□ -1.82
MCD1YDL003W PTC7P38797 343 aa3.67□□□□□ -1.82
MCD1YDL003W ALT1P52893 592 aa3.67□□□□□ -1.82
MCD1YDL003W ELA1P53861 379 aaPredicted RBP3.67□□□□□ -1.82
MCD1YDL003W YVC1Q12324 675 aa3.67□□□□□ -1.82
MCD1YDL003W AIM3P38266 947 aaKnown RBP3.67□□□□□ -1.82
MCD1YDL003W PEX7P39108 375 aa3.67□□□□□ -1.82
MCD1YDL003W GTS1P40956 396 aa3.67□□□□□ -1.82
MCD1YDL003W MRPL22P53881 309 aa3.67□□□□□ -1.82
MCD1YDL003W CTR9P89105 1077 aa3.67□□□□□ -1.82
MCD1YDL003W NNK1P36003 928 aa3.66□□□□□ -1.82
MCD1YDL003W FLR1P38124 548 aa3.66□□□□□ -1.82
MCD1YDL003W FOL2P51601 243 aaKnown RBP3.66□□□□□ -1.82
MCD1YDL003W HDA2Q06629 674 aa3.66□□□□□ -1.82
MCD1YDL003W SMY2P32909 740 aaKnown RBP3.65□□□□□ -1.82
MCD1YDL003W RIM11P38615 370 aa3.65□□□□□ -1.82
MCD1YDL003W CMR1Q12510 522 aaKnown RBP3.65□□□□□ -1.82
MCD1YDL003W RIM8P53179 542 aa3.64□□□□□ -1.83
MCD1YDL003W YGR045CP53229 120 aa3.64□□□□□ -1.83
MCD1YDL003W LPX1Q12405 387 aaKnown RBP3.64□□□□□ -1.83
MCD1YDL003W BOL3P39724 118 aa3.64□□□□□ -1.83
MCD1YDL003W UFD2P54860 961 aa3.64□□□□□ -1.83
MCD1YDL003W RSC4Q02206 625 aa3.64□□□□□ -1.83
MCD1YDL003W TOD6P34219 525 aa3.63□□□□□ -1.83
MCD1YDL003W YKL077WP36081 392 aa3.63□□□□□ -1.83
MCD1YDL003W GLO3P38682 493 aaKnown RBP3.63□□□□□ -1.83
MCD1YDL003W GIS1Q03833 894 aa3.63□□□□□ -1.83
MCD1YDL003W PRP5P21372 849 aaPredicted RBP3.62□□□□□ -1.83
MCD1YDL003W ETP1P38748 585 aaKnown RBP3.62□□□□□ -1.83
MCD1YDL003W COBP00163 385 aa3.61□□□□□ -1.83
MCD1YDL003W TPP1Q03796 238 aa3.61□□□□□ -1.83
MCD1YDL003W GSF2Q04697 403 aaKnown RBP3.61□□□□□ -1.83
MCD1YDL003W PMT7Q06644 662 aa3.61□□□□□ -1.83
MCD1YDL003W DUR3P33413 735 aa3.61□□□□□ -1.83
MCD1YDL003W ARL1P38116 183 aaKnown RBP3.61□□□□□ -1.83
MCD1YDL003W YNL011CP53980 444 aa3.61□□□□□ -1.83
MCD1YDL003W PUS7Q08647 676 aaKnown RBP3.61□□□□□ -1.83
MCD1YDL003W SOD2P00447 233 aa3.6□□□□□ -1.83
MCD1YDL003W MCM5P29496 775 aaKnown RBP3.6□□□□□ -1.83
MCD1YDL003W KAR5Q04746 504 aa3.6□□□□□ -1.83
MCD1YDL003W YOR352WQ08816 343 aa3.6□□□□□ -1.83
MCD1YDL003W QDR1P40475 563 aa3.59□□□□□ -1.83
MCD1YDL003W SNO2P53823 222 aa3.59□□□□□ -1.83
MCD1YDL003W BSC2Q05611 235 aa3.59□□□□□ -1.83
MCD1YDL003W YPL277CQ08989 487 aa3.59□□□□□ -1.83
MCD1YDL003W YDL177CQ12257 170 aa3.59□□□□□ -1.83
MCD1YDL003W YLR358CO13565 187 aa3.58□□□□□ -1.84
MCD1YDL003W RPS13P05756 151 aaKnown RBP3.58□□□□□ -1.84
MCD1YDL003W ATG14P38270 344 aa3.58□□□□□ -1.84
MCD1YDL003W SHU2P38957 223 aa3.58□□□□□ -1.84
MCD1YDL003W ABZ1P37254 787 aaPredicted RBP3.58□□□□□ -1.84
MCD1YDL003W YHL012WP38709 493 aa3.58□□□□□ -1.84
MCD1YDL003W RVS167P39743 482 aaKnown RBP3.58□□□□□ -1.84
MCD1YDL003W NUT1P53114 1132 aa3.58□□□□□ -1.84
MCD1YDL003W YAF9P53930 226 aa3.58□□□□□ -1.84
MCD1YDL003W FLP1P03870 423 aa3.57□□□□□ -1.84
MCD1YDL003W NMD3P38861 518 aaKnown RBP3.57□□□□□ -1.84
MCD1YDL003W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
MCD1YDL003W TUB2P02557 457 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W RET1P22276 1149 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W AIM26P32858 118 aa3.56□□□□□ -1.84
MCD1YDL003W MDL2P33311 773 aa3.56□□□□□ -1.84
MCD1YDL003W SHM2P37291 469 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W HSE1P38753 452 aa3.56□□□□□ -1.84
MCD1YDL003W YAR028WP39548 234 aa3.56□□□□□ -1.84
MCD1YDL003W SLS1P42900 643 aa3.56□□□□□ -1.84
MCD1YDL003W YLR257WQ06146 321 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W PNS1Q12412 539 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-LR4P0C2I8 440 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W TY1A-DR6P0CX70 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-ER1P0CX71 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-LR2P0CX72 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-PLP0CX73 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-JR1P0CX74 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-LR3P0CX75 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-ML2P0CX76 440 aa3.56□□□□□ -1.84
MCD1YDL003W SAP155P43612 1002 aa3.56□□□□□ -1.84
MCD1YDL003W MTR4P47047 1073 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W INP54Q08227 384 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W LAP2Q10740 671 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-GR1Q12085 440 aa3.56□□□□□ -1.84
MCD1YDL003W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W TY1A-OLQ92392 440 aaKnown RBP3.56□□□□□ -1.84
MCD1YDL003W MON1P53129 644 aa3.55□□□□□ -1.84
MCD1YDL003W RPL34AP87262 121 aaPredicted RBP3.55□□□□□ -1.84
MCD1YDL003W ACF4P47129 309 aa3.54□□□□□ -1.84
MCD1YDL003W CDC55Q00362 526 aa3.54□□□□□ -1.84
MCD1YDL003W CLU1Q03690 1277 aaKnown RBP3.54□□□□□ -1.84
MCD1YDL003W TRS120Q04183 1289 aa3.54□□□□□ -1.84
MCD1YDL003W HRK1Q08732 759 aaKnown RBP3.54□□□□□ -1.84
MCD1YDL003W MPT5P39016 859 aaKnown RBP RIP-Chip data3.53□□□□□ -1.85not detected
MCD1YDL003W SAM35P14693 329 aa3.52□□□□□ -1.85
MCD1YDL003W EXO5P38289 585 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms