RNA–Protein interactions for RNA: YCR068W

ATG15, Transcript of Lipase required for intravacuolar lysis of autophagic and Cvt bodies, yeast

Gene ATG15, Length 1,563 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG15	YCR068W	COG8	Q04632	607 aa		11.29	□□□□□ -0.6
ATG15	YCR068W	DIT2	P21595	489 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	YBL028C	P38202	106 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	CST26	P38226	397 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	YGL081W	P53156	320 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	YOR111W	Q99210	232 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	KEX1	P09620	729 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	SWI4	P25302	1093 aa	Known RBP	11.28	□□□□□ -0.6
ATG15	YCR068W	RFC5	P38251	354 aa		11.28	□□□□□ -0.6
ATG15	YCR068W	PGI1	P12709	554 aa	Known RBP	11.27	□□□□□ -0.61
ATG15	YCR068W	RPL8B	P29453	256 aa	Known RBP	11.27	□□□□□ -0.61
ATG15	YCR068W	KEL1	P38853	1164 aa	Known RBP	11.27	□□□□□ -0.61
ATG15	YCR068W	RPN10	P38886	268 aa	Known RBP	11.27	□□□□□ -0.61
ATG15	YCR068W	PEX19	Q07418	342 aa		11.27	□□□□□ -0.61
ATG15	YCR068W	TUS1	Q06412	1307 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	HCA4	P20448	770 aa	Known RBP	11.26	□□□□□ -0.61
ATG15	YCR068W	CHS3	P29465	1165 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	ASF1	P32447	279 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	MAL33	P38157	468 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	CIR1	P42940	261 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	FOL1	P53848	824 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	GDE1	Q02979	1223 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	AIM44	Q99299	758 aa		11.26	□□□□□ -0.61
ATG15	YCR068W	RXT2	P38255	430 aa		11.25	□□□□□ -0.61
ATG15	YCR068W	FAR11	P53917	953 aa		11.25	□□□□□ -0.61
ATG15	YCR068W	VPS30	Q02948	557 aa		11.25	□□□□□ -0.61
ATG15	YCR068W	GAL2	P13181	574 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	RDS1	P25611	832 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	ELM1	P32801	640 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	PUS5	Q06244	254 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	CSR2	Q12734	1121 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	TUB2	P02557	457 aa	Known RBP	11.24	□□□□□ -0.61
ATG15	YCR068W	HSP82	P02829	709 aa	Known RBP	11.24	□□□□□ -0.61
ATG15	YCR068W	MBR1	P23493	339 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	TPS3	P38426	1054 aa	Known RBP	11.24	□□□□□ -0.61
ATG15	YCR068W	TOM71	P38825	639 aa	Known RBP	11.24	□□□□□ -0.61
ATG15	YCR068W	PEA2	P40091	420 aa		11.24	□□□□□ -0.61
ATG15	YCR068W	NUC1	P08466	329 aa		11.23	□□□□□ -0.61
ATG15	YCR068W	SRP54	P20424	541 aa	Known RBP	11.23	□□□□□ -0.61
ATG15	YCR068W	ACE2	P21192	770 aa		11.23	□□□□□ -0.61
ATG15	YCR068W	ARL1	P38116	183 aa	Known RBP	11.23	□□□□□ -0.61
ATG15	YCR068W	PCI8	P40512	444 aa		11.23	□□□□□ -0.61
ATG15	YCR068W	YDR341C	Q05506	607 aa	Known RBP	11.23	□□□□□ -0.61
ATG15	YCR068W	RSM25	P40496	264 aa		11.22	□□□□□ -0.61
ATG15	YCR068W	PIL1	P53252	339 aa	Known RBP	11.22	□□□□□ -0.61
ATG15	YCR068W	MDM1	Q01846	1127 aa		11.22	□□□□□ -0.61
ATG15	YCR068W	DSE3	Q08729	430 aa		11.22	□□□□□ -0.61
ATG15	YCR068W	LAP2	Q10740	671 aa		11.22	□□□□□ -0.61
ATG15	YCR068W	CEX1	Q12453	761 aa		11.22	□□□□□ -0.61
ATG15	YCR068W	CDC6	P09119	513 aa		11.21	□□□□□ -0.61
ATG15	YCR068W	SPB4	P25808	606 aa	Predicted RBP	11.21	□□□□□ -0.61
ATG15	YCR068W	TIF4631	P39935	952 aa	Known RBP	11.21	□□□□□ -0.61
ATG15	YCR068W	CCT5	P40413	562 aa	Known RBP	11.21	□□□□□ -0.61
ATG15	YCR068W	CIT1	P00890	479 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	MET6	P05694	767 aa	Known RBP	11.2	□□□□□ -0.62
ATG15	YCR068W	SEC20	P28791	383 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	NAF1	P53919	492 aa	Known RBP	11.2	□□□□□ -0.62
ATG15	YCR068W	ETT1	Q08421	412 aa	Known RBP	11.2	□□□□□ -0.62
ATG15	YCR068W	DCS2	Q12123	353 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	GET3	Q12154	354 aa	Known RBP	11.2	□□□□□ -0.62
ATG15	YCR068W	CLC1	P17891	233 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	VPS45	P38932	577 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	UBP9	P39967	754 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	YGL138C	P53122	345 aa		11.2	□□□□□ -0.62
ATG15	YCR068W	CWC15	Q03772	175 aa	Known RBP	11.2	□□□□□ -0.62
ATG15	YCR068W	FRS2	P15625	503 aa	Known RBP	11.19	□□□□□ -0.62
ATG15	YCR068W	RFT1	P38206	574 aa	Predicted RBP	11.19	□□□□□ -0.62
ATG15	YCR068W	RVS167	P39743	482 aa	Known RBP	11.19	□□□□□ -0.62
ATG15	YCR068W	KRE33	P53914	1056 aa	Known RBP	11.19	□□□□□ -0.62
ATG15	YCR068W	ERG12	P07277	443 aa		11.18	□□□□□ -0.62
ATG15	YCR068W	SAM2	P19358	384 aa	Known RBP	11.18	□□□□□ -0.62
ATG15	YCR068W	VPS1	P21576	704 aa	Known RBP	11.18	□□□□□ -0.62
ATG15	YCR068W	CCT3	P39077	534 aa	Known RBP	11.18	□□□□□ -0.62
ATG15	YCR068W	ACA1	P39970	489 aa		11.18	□□□□□ -0.62
ATG15	YCR068W	VHR2	P40041	505 aa		11.18	□□□□□ -0.62
ATG15	YCR068W	APC11	Q12157	165 aa		11.18	□□□□□ -0.62
ATG15	YCR068W	DDP1	Q99321	188 aa	Known RBP	11.18	□□□□□ -0.62
ATG15	YCR068W	MAK11	P20484	414 aa	Known RBP	11.17	□□□□□ -0.62
ATG15	YCR068W	RPN12	P32496	274 aa		11.17	□□□□□ -0.62
ATG15	YCR068W	PEX21	P50091	288 aa		11.17	□□□□□ -0.62
ATG15	YCR068W	SOL4	P53315	255 aa		11.17	□□□□□ -0.62
ATG15	YCR068W	SUB2	Q07478	446 aa	Known RBP	11.17	□□□□□ -0.62
ATG15	YCR068W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.17	□□□□□ -0.62	not detected
ATG15	YCR068W	HXK1	P04806	485 aa	Known RBP	11.16	□□□□□ -0.62
ATG15	YCR068W	TPM2	P40414	161 aa		11.16	□□□□□ -0.62
ATG15	YCR068W	LSB1	P53281	241 aa		11.16	□□□□□ -0.62
ATG15	YCR068W	MYO1	P08964	1928 aa		11.16	□□□□□ -0.62
ATG15	YCR068W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.16	□□□□□ -0.62	not detected
ATG15	YCR068W	SPT21	P35209	758 aa		11.16	□□□□□ -0.62
ATG15	YCR068W	RRT6	P53117	311 aa	Predicted RBP	11.16	□□□□□ -0.62
ATG15	YCR068W	VIP1	Q06685	1146 aa	Known RBP	11.16	□□□□□ -0.62
ATG15	YCR068W	TYW1	Q08960	810 aa	Known RBP	11.16	□□□□□ -0.62
ATG15	YCR068W	GIN4	Q12263	1142 aa		11.16	□□□□□ -0.62
ATG15	YCR068W	NBL1	Q3E7Y6	73 aa		11.16	□□□□□ -0.62
ATG15	YCR068W	RGP1	P16664	663 aa		11.15	□□□□□ -0.62
ATG15	YCR068W	TIP41	Q12199	356 aa		11.15	□□□□□ -0.62
ATG15	YCR068W	MCM3	P24279	971 aa	Known RBP	11.14	□□□□□ -0.63
ATG15	YCR068W	RET3	P53600	189 aa		11.14	□□□□□ -0.63
ATG15	YCR068W	GIS4	Q04233	774 aa		11.14	□□□□□ -0.63
ATG15	YCR068W	CSC1	Q06538	782 aa		11.14	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 196.9 ms