RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	KEL1	P38853	1164 aa	Known RBP	4.69	□□□□□ -1.66
CWH43	YCR017C	FMP30	Q02883	468 aa		4.69	□□□□□ -1.66
CWH43	YCR017C	WHI3	P34761	661 aa	Known RBP	4.68	□□□□□ -1.66
CWH43	YCR017C	GPB2	P39717	880 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	GUD1	Q07729	489 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	MYO1	P08964	1928 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	KTR1	P27810	393 aa	Known RBP	4.68	□□□□□ -1.66
CWH43	YCR017C	MET1	P36150	593 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	YFL040W	P43562	540 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	HXT10	P43581	546 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	YDL129W	Q07555	291 aa		4.68	□□□□□ -1.66
CWH43	YCR017C	FKS1	P38631	1876 aa	Known RBP	4.68	□□□□□ -1.66
CWH43	YCR017C	PRE8	P23639	250 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	PKC1	P24583	1151 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	ACA1	P39970	489 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	FAR11	P53917	953 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	PUF6	Q04373	656 aa	Known RBP	4.67	□□□□□ -1.66
CWH43	YCR017C	RPN7	Q06103	429 aa	Known RBP	4.67	□□□□□ -1.66
CWH43	YCR017C	ALG2	P43636	503 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	YGR273C	P53329	174 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	AI4	P03878	556 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	GAP1	P19145	602 aa	Predicted RBP	4.67	□□□□□ -1.66
CWH43	YCR017C	SRM1	P21827	482 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	ASF1	P32447	279 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	GRX7	P38068	203 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	KTR3	P38130	404 aa	Predicted RBP	4.67	□□□□□ -1.66
CWH43	YCR017C	PBY1	P38254	753 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	SOL3	P38858	249 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	PKH3	Q03306	898 aa	Predicted RBP	4.67	□□□□□ -1.66
CWH43	YCR017C	YPR148C	Q06523	435 aa		4.67	□□□□□ -1.66
CWH43	YCR017C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
CWH43	YCR017C	SEC8	P32855	1065 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	YBL028C	P38202	106 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	CRG1	P38892	291 aa	RIP-Chip data	4.66	□□□□□ -1.66	not detected
CWH43	YCR017C	SPO22	P40511	975 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	GSM1	P42950	618 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	BDP1	P46678	594 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	ALO1	P54783	526 aa	Known RBP	4.66	□□□□□ -1.66
CWH43	YCR017C	EAR1	Q03212	550 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	KEL3	Q08979	651 aa	Predicted RBP	4.66	□□□□□ -1.66
CWH43	YCR017C	CFT2	Q12102	859 aa	Predicted RBP	4.66	□□□□□ -1.66
CWH43	YCR017C	LAM4	P38800	1345 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	TY1B-A	O13527	1196 aa	Known RBP	4.66	□□□□□ -1.66
CWH43	YCR017C	SDH2	P21801	266 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	ASH1	P34233	588 aa		4.66	□□□□□ -1.66
CWH43	YCR017C	CDC19	P00549	500 aa	Known RBP	4.65	□□□□□ -1.66
CWH43	YCR017C	ALD6	P54115	500 aa	Known RBP	4.65	□□□□□ -1.66
CWH43	YCR017C	YML020W	Q03722	664 aa		4.65	□□□□□ -1.66
CWH43	YCR017C	YDL124W	Q07551	312 aa	Known RBP	4.65	□□□□□ -1.66
CWH43	YCR017C	RGT1	P32862	1170 aa		4.65	□□□□□ -1.67
CWH43	YCR017C	MCD4	P36051	919 aa		4.65	□□□□□ -1.67
CWH43	YCR017C	OPY1	P38271	328 aa		4.65	□□□□□ -1.67
CWH43	YCR017C	SAP30	P38429	201 aa		4.65	□□□□□ -1.67
CWH43	YCR017C	YGR125W	P53273	1036 aa		4.65	□□□□□ -1.67
CWH43	YCR017C	RPS15	Q01855	142 aa	Known RBP	4.65	□□□□□ -1.67
CWH43	YCR017C	SPN1	Q06505	410 aa	Predicted RBP	4.65	□□□□□ -1.67
CWH43	YCR017C	MET7	Q08645	548 aa		4.64	□□□□□ -1.67
CWH43	YCR017C	TOM71	P38825	639 aa	Known RBP	4.64	□□□□□ -1.67
CWH43	YCR017C	RRP8	P38961	392 aa	Known RBP	4.64	□□□□□ -1.67
CWH43	YCR017C	YIR042C	P40586	236 aa		4.64	□□□□□ -1.67
CWH43	YCR017C	ECM30	Q06673	1274 aa		4.64	□□□□□ -1.67
CWH43	YCR017C	MYO3	P36006	1272 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	STM1	P39015	273 aa	Known RBP	4.63	□□□□□ -1.67
CWH43	YCR017C	PML39	Q03760	334 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	RIF1	P29539	1916 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	SLN1	P39928	1220 aa	Predicted RBP	4.63	□□□□□ -1.67
CWH43	YCR017C	ECM29	P38737	1868 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	TUB2	P02557	457 aa	Known RBP	4.63	□□□□□ -1.67
CWH43	YCR017C	EUG1	P32474	517 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	ILV3	P39522	585 aa	Known RBP	4.63	□□□□□ -1.67
CWH43	YCR017C	VPS70	P47161	811 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	MRPS35	P53292	345 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	PEX29	Q03370	554 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	NKP2	Q06162	153 aa		4.63	□□□□□ -1.67
CWH43	YCR017C	HEM1	P09950	548 aa	Predicted RBP	4.62	□□□□□ -1.67
CWH43	YCR017C	YHL050C	P38721	697 aa		4.62	□□□□□ -1.67
CWH43	YCR017C	UBX5	Q06682	500 aa		4.62	□□□□□ -1.67
CWH43	YCR017C	TPM2	P40414	161 aa		4.62	□□□□□ -1.67
CWH43	YCR017C	RPT3	P33298	428 aa	Known RBP	4.61	□□□□□ -1.67
CWH43	YCR017C	SIS2	P36024	562 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	YML037C	Q03703	340 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	MYO5	Q04439	1219 aa	Known RBP	4.61	□□□□□ -1.67
CWH43	YCR017C	MRD1	Q06106	887 aa	Known RBP	4.61	□□□□□ -1.67
CWH43	YCR017C	RIM20	Q12033	661 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	MOT1	P32333	1867 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	SNA3	P14359	133 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	YDJ1	P25491	409 aa	Known RBP	4.61	□□□□□ -1.67
CWH43	YCR017C	VPS45	P38932	577 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	NSG2	P53898	299 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	SGD1	Q06132	899 aa		4.61	□□□□□ -1.67
CWH43	YCR017C	ISA1	Q07821	250 aa	Predicted RBP	4.61	□□□□□ -1.67
CWH43	YCR017C	VMA2	P16140	517 aa	Known RBP	4.6	□□□□□ -1.67
CWH43	YCR017C	COQ1	P18900	473 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	AFT1	P22149	690 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	SRO9	P25567	434 aa	Known RBP	4.6	□□□□□ -1.67
CWH43	YCR017C	TGL1	P34163	548 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	MAC1	P35192	417 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	LSB1	P53281	241 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	UFD2	P54860	961 aa		4.6	□□□□□ -1.67
CWH43	YCR017C	SPH1	Q06160	661 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms