RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 CDV3Q9UKY7 258 aaKnown RBP10.73□□□□□ -0.69
CASC19-261ENST00000641853 ZNF330Q9Y3S2 320 aaPredicted RBP10.73□□□□□ -0.69
CASC19-261ENST00000641853 LCE2BO14633 110 aa10.72□□□□□ -0.69
CASC19-261ENST00000641853 GIGYF1O75420 1035 aaPredicted RBP10.72□□□□□ -0.69
CASC19-261ENST00000641853 DGAT1O75907 488 aa10.72□□□□□ -0.69
CASC19-261ENST00000641853 EIF4G2P78344 907 aaKnown RBP eCLIP10.72□□□□□ -0.69
CASC19-261ENST00000641853 INTS6LQ5JSJ4 861 aaKnown RBP10.72□□□□□ -0.69
CASC19-261ENST00000641853 ESPNB1AK53 854 aa10.71□□□□□ -0.69
CASC19-261ENST00000641853 NR5A1Q13285 461 aa10.71□□□□□ -0.69
CASC19-261ENST00000641853 NBPF20Q3BBV1 942 aa10.71□□□□□ -0.69
CASC19-261ENST00000641853 PKDCCQ504Y2 493 aa10.71□□□□□ -0.69
CASC19-261ENST00000641853 AVPP01185 164 aa10.7□□□□□ -0.7
CASC19-261ENST00000641853 WWC1Q8IX03 1113 aa10.7□□□□□ -0.7
CASC19-261ENST00000641853 KLF16Q9BXK1 252 aaPredicted RBP10.7□□□□□ -0.7
CASC19-261ENST00000641853 ALG2Q9H553 416 aa10.7□□□□□ -0.7
CASC19-261ENST00000641853 CEP126Q9P2H0 1117 aa10.7□□□□□ -0.7
CASC19-261ENST00000641853 TRAK2O60296 914 aa10.69□□□□□ -0.7
CASC19-261ENST00000641853 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
CASC19-261ENST00000641853 RAB15P59190 212 aa10.69□□□□□ -0.7
CASC19-261ENST00000641853 MCCD1P59942 119 aaPredicted RBP10.68□□□□□ -0.7
CASC19-261ENST00000641853 MYT1Q01538 1121 aa10.68□□□□□ -0.7
CASC19-261ENST00000641853 Q6ZNB5 142 aa10.67□□□□□ -0.7
CASC19-261ENST00000641853 CCDC116Q8IYX3 515 aa10.67□□□□□ -0.7
CASC19-261ENST00000641853 SOX11P35716 441 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 ERVH48-1M5A8F1 160 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 TIMP2P16035 220 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 PPP1R26Q5T8A7 1209 aaPredicted RBP10.66□□□□□ -0.7
CASC19-261ENST00000641853 ITPKCQ96DU7 683 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 ZFAND3Q9H8U3 227 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 TIMELESSQ9UNS1 1208 aa10.66□□□□□ -0.7
CASC19-261ENST00000641853 ST8SIA5O15466 376 aa10.65□□□□□ -0.7
CASC19-261ENST00000641853 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
CASC19-261ENST00000641853 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
CASC19-261ENST00000641853 HDGFL1Q5TGJ6 251 aa10.65□□□□□ -0.7
CASC19-261ENST00000641853 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
CASC19-261ENST00000641853 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
CASC19-261ENST00000641853 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
CASC19-261ENST00000641853 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
CASC19-261ENST00000641853 PIK3CDO00329 1044 aa10.63□□□□□ -0.71
CASC19-261ENST00000641853 GLMNQ92990 594 aa10.63□□□□□ -0.71
CASC19-261ENST00000641853 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
CASC19-261ENST00000641853 ZIC2O95409 532 aaPredicted RBP10.62□□□□□ -0.71
CASC19-261ENST00000641853 SMCPP49901 116 aaPredicted RBP10.62□□□□□ -0.71
CASC19-261ENST00000641853 CRIPAKQ8N1N5 446 aa10.62□□□□□ -0.71
CASC19-261ENST00000641853 CCDC85AQ96PX6 553 aaPredicted RBP10.62□□□□□ -0.71
CASC19-261ENST00000641853 EMILIN1Q9Y6C2 1016 aa10.62□□□□□ -0.71
CASC19-261ENST00000641853 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
CASC19-261ENST00000641853 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
CASC19-261ENST00000641853 ZNF784Q8NCA9 323 aaPredicted RBP10.61□□□□□ -0.71
CASC19-261ENST00000641853 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
CASC19-261ENST00000641853 DACH1Q9UI36 760 aa10.61□□□□□ -0.71
CASC19-261ENST00000641853 CAPN5O15484 640 aaPredicted RBP10.6□□□□□ -0.71
CASC19-261ENST00000641853 LILRA1O75019 489 aa10.6□□□□□ -0.71
CASC19-261ENST00000641853 TRAF7Q6Q0C0 670 aa10.6□□□□□ -0.71
CASC19-261ENST00000641853 CDCA7Q9BWT1 371 aaPredicted RBP10.6□□□□□ -0.71
CASC19-261ENST00000641853 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
CASC19-261ENST00000641853 AXIN1O15169 862 aa10.59□□□□□ -0.71
CASC19-261ENST00000641853 SLFNL1Q499Z3 407 aa10.59□□□□□ -0.71
CASC19-261ENST00000641853 RNF20Q5VTR2 975 aa10.59□□□□□ -0.71
CASC19-261ENST00000641853 RNF135Q8IUD6 432 aa10.59□□□□□ -0.71
CASC19-261ENST00000641853 CBLBQ13191 982 aa10.58□□□□□ -0.72
CASC19-261ENST00000641853 PCDHB11Q9Y5F2 797 aa10.58□□□□□ -0.72
CASC19-261ENST00000641853 SCTRP47872 440 aa10.58□□□□□ -0.72
CASC19-261ENST00000641853 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
CASC19-261ENST00000641853 PGPEP1Q9NXJ5 209 aa10.58□□□□□ -0.72
CASC19-261ENST00000641853 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
CASC19-261ENST00000641853 CALR3Q96L12 384 aaKnown RBP10.57□□□□□ -0.72
CASC19-261ENST00000641853 BMP1P13497 986 aa10.56□□□□□ -0.72
CASC19-261ENST00000641853 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 TBC1D9Q6ZT07 1266 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 Q6ZVU0 165 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 CCDC125Q86Z20 511 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 MEIOBQ8N635 442 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 PLPP7Q8NBV4 271 aa10.55□□□□□ -0.72
CASC19-261ENST00000641853 DOLKQ9UPQ8 538 aa10.54□□□□□ -0.72
CASC19-261ENST00000641853 SKIP12755 728 aa10.53□□□□□ -0.72
CASC19-261ENST00000641853 KDF1Q8NAX2 398 aaPredicted RBP10.53□□□□□ -0.72
CASC19-261ENST00000641853 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
CASC19-261ENST00000641853 C1orf115Q9H7X2 142 aa10.52□□□□□ -0.73
CASC19-261ENST00000641853 ATP13A2Q9NQ11 1180 aa10.52□□□□□ -0.73
CASC19-261ENST00000641853 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
CASC19-261ENST00000641853 NFATC2IPQ8NCF5 419 aa10.51□□□□□ -0.73
CASC19-261ENST00000641853 OXLD1Q5BKU9 147 aa10.51□□□□□ -0.73
CASC19-261ENST00000641853 ERICH6Q7L0X2 663 aa10.51□□□□□ -0.73
CASC19-261ENST00000641853 DEPDC4Q8N2C3 294 aa10.51□□□□□ -0.73
CASC19-261ENST00000641853 OSBPL3Q9H4L5 887 aa10.51□□□□□ -0.73
CASC19-261ENST00000641853 MAP7D1Q3KQU3 841 aa10.5□□□□□ -0.73
CASC19-261ENST00000641853 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
CASC19-261ENST00000641853 TFIP11Q9UBB9 837 aaKnown RBP10.5□□□□□ -0.73
CASC19-261ENST00000641853 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
CASC19-261ENST00000641853 ATP9BO43861 1147 aa10.49□□□□□ -0.73
CASC19-261ENST00000641853 ADH1AP07327 375 aa10.49□□□□□ -0.73
CASC19-261ENST00000641853 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
CASC19-261ENST00000641853 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
CASC19-261ENST00000641853 POTECB2RU33 542 aa10.48□□□□□ -0.73
CASC19-261ENST00000641853 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms