RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.41■■□□□ 1.02
PHGDH-216ENST00000641375 TRIM35Q9UPQ4 493 aa21.41■■□□□ 1.02
PHGDH-216ENST00000641375 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
PHGDH-216ENST00000641375 IL16Q14005 1332 aa21.4■■□□□ 1.02
PHGDH-216ENST00000641375 RGPD1P0DJD0 1748 aa21.39■■□□□ 1.01
PHGDH-216ENST00000641375 ATF3P18847 181 aa21.39■■□□□ 1.01
PHGDH-216ENST00000641375 HSP90AB2PQ58FF8 381 aa21.39■■□□□ 1.01
PHGDH-216ENST00000641375 ORAI2Q96SN7 254 aa21.39■■□□□ 1.01
PHGDH-216ENST00000641375 AMPHP49418 695 aa21.38■■□□□ 1.01
PHGDH-216ENST00000641375 NFE2L2Q16236 605 aa21.38■■□□□ 1.01
PHGDH-216ENST00000641375 NUTM2GQ5VZR2 741 aa21.37■■□□□ 1.01
PHGDH-216ENST00000641375 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
PHGDH-216ENST00000641375 FOXO3O43524 673 aa21.36■■□□□ 1.01
PHGDH-216ENST00000641375 PLIN1O60240 522 aa21.35■■□□□ 1.01
PHGDH-216ENST00000641375 MST1RQ04912 1400 aa21.35■■□□□ 1.01
PHGDH-216ENST00000641375 CADPS2Q86UW7 1296 aa21.34■■□□□ 1.01
PHGDH-216ENST00000641375 ARHGEF10O15013 1369 aa21.34■■□□□ 1.01
PHGDH-216ENST00000641375 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
PHGDH-216ENST00000641375 B4GALNT3Q6L9W6 998 aa21.34■■□□□ 1.01
PHGDH-216ENST00000641375 KCNH5Q8NCM2 988 aa21.34■■□□□ 1.01
PHGDH-216ENST00000641375 RTL1A6NKG5 1358 aa21.34■■□□□ 1.01
PHGDH-216ENST00000641375 CALD1Q05682 793 aaKnown RBP21.33■■□□□ 1.01
PHGDH-216ENST00000641375 LMOD3Q0VAK6 560 aa21.33■■□□□ 1.01
PHGDH-216ENST00000641375 LTN1O94822 1766 aa21.33■■□□□ 1.01
PHGDH-216ENST00000641375 DLG5Q8TDM6 1919 aa21.33■■□□□ 1.01
PHGDH-216ENST00000641375 TRPM3Q9HCF6 1732 aaPredicted RBP21.33■■□□□ 1.01
PHGDH-216ENST00000641375 MSH6P52701 1360 aa21.33■■□□□ 1.01
PHGDH-216ENST00000641375 CT47B1P0C2W7 299 aaPredicted RBP21.33■■□□□ 1
PHGDH-216ENST00000641375 CCDC136Q96JN2 1154 aa21.32■■□□□ 1
PHGDH-216ENST00000641375 EXOC6Q8TAG9 804 aa21.31■■□□□ 1
PHGDH-216ENST00000641375 FANCIQ9NVI1 1328 aa21.31■■□□□ 1
PHGDH-216ENST00000641375 NFAT5O94916 1531 aa21.31■■□□□ 1
PHGDH-216ENST00000641375 HOXC9P31274 260 aa21.31■■□□□ 1
PHGDH-216ENST00000641375 XIRP1Q702N8 1843 aaKnown RBP21.3■■□□□ 1
PHGDH-216ENST00000641375 KRT28Q7Z3Y7 464 aa21.3■■□□□ 1
PHGDH-216ENST00000641375 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
PHGDH-216ENST00000641375 KDRP35968 1356 aa21.29■■□□□ 1
PHGDH-216ENST00000641375 PHRF1Q9P1Y6 1649 aaKnown RBP21.29■■□□□ 1
PHGDH-216ENST00000641375 BCAR3O75815 825 aa21.29■■□□□ 1
PHGDH-216ENST00000641375 IGSF1Q8N6C5 1336 aa21.28■■□□□ 1
PHGDH-216ENST00000641375 SLIT3O75094 1523 aa21.28■■□□□ 1
PHGDH-216ENST00000641375 RARSP54136 660 aaKnown RBP21.27■■□□□ 1
PHGDH-216ENST00000641375 XPCQ01831 940 aaPredicted RBP21.27■■□□□ 1
PHGDH-216ENST00000641375 TSR2Q969E8 191 aaKnown RBP21.26■□□□□ 0.99
PHGDH-216ENST00000641375 TSHZ2Q9NRE2 1034 aa21.26■□□□□ 0.99
PHGDH-216ENST00000641375 IP6K1Q92551 441 aa21.25■□□□□ 0.99
PHGDH-216ENST00000641375 CRBNQ96SW2 442 aa21.25■□□□□ 0.99
PHGDH-216ENST00000641375 EYA1Q99502 592 aa21.25■□□□□ 0.99
PHGDH-216ENST00000641375 ALS2Q96Q42 1657 aa21.25■□□□□ 0.99
PHGDH-216ENST00000641375 C20orf194Q5TEA3 1177 aa21.24■□□□□ 0.99
PHGDH-216ENST00000641375 GNAI1P63096 354 aa21.24■□□□□ 0.99
PHGDH-216ENST00000641375 USP19O94966 1318 aa21.24■□□□□ 0.99
PHGDH-216ENST00000641375 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
PHGDH-216ENST00000641375 GCP02774 474 aa21.23■□□□□ 0.99
PHGDH-216ENST00000641375 EXOSC9Q06265 439 aaKnown RBP21.23■□□□□ 0.99
PHGDH-216ENST00000641375 LMOD2Q6P5Q4 547 aa21.23■□□□□ 0.99
PHGDH-216ENST00000641375 IFT57Q9NWB7 429 aa21.23■□□□□ 0.99
PHGDH-216ENST00000641375 PDE3AQ14432 1141 aa21.23■□□□□ 0.99
PHGDH-216ENST00000641375 CANXP27824 592 aaKnown RBP21.22■□□□□ 0.99
PHGDH-216ENST00000641375 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
PHGDH-216ENST00000641375 CFAP44Q96MT7 982 aa21.2■□□□□ 0.98
PHGDH-216ENST00000641375 ZNF853P0CG23 659 aa21.19■□□□□ 0.98
PHGDH-216ENST00000641375 ARHGEF25Q86VW2 580 aa21.19■□□□□ 0.98
PHGDH-216ENST00000641375 ZNF428Q96B54 188 aa21.19■□□□□ 0.98
PHGDH-216ENST00000641375 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
PHGDH-216ENST00000641375 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
PHGDH-216ENST00000641375 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
PHGDH-216ENST00000641375 FAM83GA6ND36 823 aa21.17■□□□□ 0.98
PHGDH-216ENST00000641375 FRAT1Q92837 279 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-216ENST00000641375 LTV1Q96GA3 475 aaPredicted RBP21.17■□□□□ 0.98
PHGDH-216ENST00000641375 PXDNQ92626 1479 aa21.16■□□□□ 0.98
PHGDH-216ENST00000641375 TNS3Q68CZ2 1445 aa21.15■□□□□ 0.98
PHGDH-216ENST00000641375 MTHFSDQ2M296 383 aaKnown RBP21.15■□□□□ 0.98
PHGDH-216ENST00000641375 MBIPQ9NS73 344 aa21.14■□□□□ 0.98
PHGDH-216ENST00000641375 ZBTB7CA1YPR0 619 aa21.14■□□□□ 0.97
PHGDH-216ENST00000641375 ALDH1L2Q3SY69 923 aa21.14■□□□□ 0.97
PHGDH-216ENST00000641375 RTF1Q92541 710 aaKnown RBP21.14■□□□□ 0.97
PHGDH-216ENST00000641375 BCL2L13Q9BXK5 485 aa21.14■□□□□ 0.97
PHGDH-216ENST00000641375 SMC4Q9NTJ3 1288 aa21.14■□□□□ 0.97
PHGDH-216ENST00000641375 MED1Q15648 1581 aaPredicted RBP21.14■□□□□ 0.97
PHGDH-216ENST00000641375 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
PHGDH-216ENST00000641375 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
PHGDH-216ENST00000641375 HTATSF1O43719 755 aaKnown RBP21.13■□□□□ 0.97
PHGDH-216ENST00000641375 MS4A1P11836 297 aa21.13■□□□□ 0.97
PHGDH-216ENST00000641375 DDX17Q92841 729 aaKnown RBP21.13■□□□□ 0.97
PHGDH-216ENST00000641375 SLAIN2Q9P270 581 aa21.12■□□□□ 0.97
PHGDH-216ENST00000641375 ZKSCAN2Q63HK3 967 aa21.12■□□□□ 0.97
PHGDH-216ENST00000641375 SSH1Q8WYL5 1049 aa21.12■□□□□ 0.97
PHGDH-216ENST00000641375 SPATA31A3Q5VYP0 1347 aa21.11■□□□□ 0.97
PHGDH-216ENST00000641375 AAMPQ13685 434 aa21.1■□□□□ 0.97
PHGDH-216ENST00000641375 MCM10Q7L590 875 aa21.1■□□□□ 0.97
PHGDH-216ENST00000641375 KIF16BQ96L93 1317 aa21.1■□□□□ 0.97
PHGDH-216ENST00000641375 RGPD2P0DJD1 1756 aa21.1■□□□□ 0.97
PHGDH-216ENST00000641375 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
PHGDH-216ENST00000641375 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
PHGDH-216ENST00000641375 PLEKHG5O94827 1062 aa21.09■□□□□ 0.97
PHGDH-216ENST00000641375 CHL1O00533 1208 aa21.09■□□□□ 0.97
PHGDH-216ENST00000641375 BRPF1P55201 1214 aaPredicted RBP21.09■□□□□ 0.97
PHGDH-216ENST00000641375 PANK1Q8TE04 598 aa21.09■□□□□ 0.97
PHGDH-216ENST00000641375 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms