RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SYNMO15061 1565 aa16.84■□□□□ 0.29
SCARB2-227ENST00000640957 NEK4P51957 841 aa16.83■□□□□ 0.29
SCARB2-227ENST00000640957 SPC24Q8NBT2 197 aa16.83■□□□□ 0.29
SCARB2-227ENST00000640957 PDLIM2Q96JY6 352 aa16.83■□□□□ 0.29
SCARB2-227ENST00000640957 NUCB2P80303 420 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 LRSAM1Q6UWE0 723 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 SMAP1Q8IYB5 467 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-227ENST00000640957 NGEFQ8N5V2 710 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 PRAM1Q96QH2 718 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 ESF1Q9H501 851 aaKnown RBP16.83■□□□□ 0.28
SCARB2-227ENST00000640957 CCDC39Q9UFE4 941 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
SCARB2-227ENST00000640957 BBXQ8WY36 941 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-227ENST00000640957 CCDC94Q9BW85 323 aaPredicted RBP16.83■□□□□ 0.28
SCARB2-227ENST00000640957 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-227ENST00000640957 MAST1Q9Y2H9 1570 aa16.82■□□□□ 0.28
SCARB2-227ENST00000640957 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-227ENST00000640957 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
SCARB2-227ENST00000640957 U2AF2P26368 475 aaKnown RBP eCLIP16.81■□□□□ 0.28
SCARB2-227ENST00000640957 PPIP5K1Q6PFW1 1433 aa16.81■□□□□ 0.28
SCARB2-227ENST00000640957 UPF3BQ9BZI7 483 aaKnown RBP16.81■□□□□ 0.28
SCARB2-227ENST00000640957 CD109Q6YHK3 1445 aa16.81■□□□□ 0.28
SCARB2-227ENST00000640957 PTMSP20962 102 aa16.81■□□□□ 0.28
SCARB2-227ENST00000640957 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
SCARB2-227ENST00000640957 CSPP1Q1MSJ5 1256 aa16.81■□□□□ 0.28
SCARB2-227ENST00000640957 MYO5CQ9NQX4 1742 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 FAM69CQ0P6D2 419 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 WAPLQ7Z5K2 1190 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 PLEKHM2Q8IWE5 1019 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
SCARB2-227ENST00000640957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-227ENST00000640957 RABEP1Q15276 862 aa16.79■□□□□ 0.28
SCARB2-227ENST00000640957 KRT24Q2M2I5 525 aa16.79■□□□□ 0.28
SCARB2-227ENST00000640957 HCLS1P14317 486 aaPredicted RBP16.79■□□□□ 0.28
SCARB2-227ENST00000640957 SDSP20132 328 aa16.78■□□□□ 0.28
SCARB2-227ENST00000640957 DMTNQ08495 405 aa16.78■□□□□ 0.28
SCARB2-227ENST00000640957 CCDC27Q2M243 656 aa16.78■□□□□ 0.28
SCARB2-227ENST00000640957 TSPY26PQ9H489 355 aa16.78■□□□□ 0.28
SCARB2-227ENST00000640957 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
SCARB2-227ENST00000640957 NOLC1Q14978 699 aaKnown RBP eCLIP16.78■□□□□ 0.28
SCARB2-227ENST00000640957 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
SCARB2-227ENST00000640957 FGD1P98174 961 aa16.77■□□□□ 0.28
SCARB2-227ENST00000640957 CABP1Q9NZU7 370 aa16.77■□□□□ 0.28
SCARB2-227ENST00000640957 ST18O60284 1047 aa16.77■□□□□ 0.27
SCARB2-227ENST00000640957 PRKAR2BP31323 418 aa16.77■□□□□ 0.27
SCARB2-227ENST00000640957 NAA30Q147X3 362 aaPredicted RBP16.77■□□□□ 0.27
SCARB2-227ENST00000640957 C14orf93Q9H972 538 aaKnown RBP16.77■□□□□ 0.27
SCARB2-227ENST00000640957 PHACTR3Q96KR7 559 aa16.76■□□□□ 0.27
SCARB2-227ENST00000640957 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
SCARB2-227ENST00000640957 NPC1L1Q9UHC9 1359 aa16.76■□□□□ 0.27
SCARB2-227ENST00000640957 EIF2AK4Q9P2K8 1649 aaKnown RBP16.76■□□□□ 0.27
SCARB2-227ENST00000640957 ADCY5O95622 1261 aa16.76■□□□□ 0.27
SCARB2-227ENST00000640957 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
SCARB2-227ENST00000640957 CYP2E1P05181 493 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-227ENST00000640957 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-227ENST00000640957 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 TERF1P54274 439 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 TERF2IPQ9NYB0 399 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 ABCC1P33527 1531 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 PLCD3Q8N3E9 789 aa16.74■□□□□ 0.27
SCARB2-227ENST00000640957 HS1BP3Q53T59 392 aa16.73■□□□□ 0.27
SCARB2-227ENST00000640957 NCKAP5LQ9HCH0 1330 aa16.73■□□□□ 0.27
SCARB2-227ENST00000640957 PALD1Q9ULE6 856 aa16.73■□□□□ 0.27
SCARB2-227ENST00000640957 KIF3AQ9Y496 699 aa16.73■□□□□ 0.27
SCARB2-227ENST00000640957 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
SCARB2-227ENST00000640957 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
SCARB2-227ENST00000640957 DIAPH1O60610 1272 aaKnown RBP16.72■□□□□ 0.27
SCARB2-227ENST00000640957 ZNF771Q7L3S4 317 aaPredicted RBP16.72■□□□□ 0.27
SCARB2-227ENST00000640957 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
SCARB2-227ENST00000640957 TTC22Q5TAA0 569 aa16.72■□□□□ 0.27
SCARB2-227ENST00000640957 IQGAP3Q86VI3 1631 aa16.72■□□□□ 0.27
SCARB2-227ENST00000640957 PDCL2Q8N4E4 241 aa16.72■□□□□ 0.27
SCARB2-227ENST00000640957 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
SCARB2-227ENST00000640957 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
SCARB2-227ENST00000640957 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
SCARB2-227ENST00000640957 USP48Q86UV5 1035 aa16.71■□□□□ 0.27
SCARB2-227ENST00000640957 CHMP4BQ9H444 224 aaKnown RBP16.71■□□□□ 0.27
SCARB2-227ENST00000640957 UNC13BO14795 1591 aa16.71■□□□□ 0.27
SCARB2-227ENST00000640957 PTPRTO14522 1441 aa16.71■□□□□ 0.27
SCARB2-227ENST00000640957 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
SCARB2-227ENST00000640957 GIMAP6Q6P9H5 292 aa16.71■□□□□ 0.27
SCARB2-227ENST00000640957 DDX54Q8TDD1 881 aaKnown RBP16.71■□□□□ 0.27
SCARB2-227ENST00000640957 PYCARDQ9ULZ3 195 aa16.71■□□□□ 0.27
SCARB2-227ENST00000640957 FIBPO43427 364 aa16.71■□□□□ 0.26
SCARB2-227ENST00000640957 VAMP4O75379 141 aa16.71■□□□□ 0.26
SCARB2-227ENST00000640957 MAP4K4O95819 1239 aaPredicted RBP16.71■□□□□ 0.26
SCARB2-227ENST00000640957 TXNDC2Q86VQ3 553 aa16.71■□□□□ 0.26
SCARB2-227ENST00000640957 RIOK3O14730 519 aaKnown RBP16.7■□□□□ 0.26
SCARB2-227ENST00000640957 ANO2Q9NQ90 1003 aa16.7■□□□□ 0.26
SCARB2-227ENST00000640957 CDK19Q9BWU1 502 aa16.7■□□□□ 0.26
SCARB2-227ENST00000640957 MYOM1P52179 1685 aa16.7■□□□□ 0.26
SCARB2-227ENST00000640957 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
SCARB2-227ENST00000640957 NPHP1O15259 732 aa16.69■□□□□ 0.26
SCARB2-227ENST00000640957 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms