RNA–Protein interactions for RNA: ENST00000640311.1

KCNMA1-280, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 3

Gene KCNMA1, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-280	ENST00000640311	SPATA31A1	Q5TZJ5	1347 aa		13.96	□□□□□ -0.17
KCNMA1-280	ENST00000640311	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
KCNMA1-280	ENST00000640311	AXIN2	Q9Y2T1	843 aa		13.96	□□□□□ -0.17
KCNMA1-280	ENST00000640311	ONECUT3	O60422	494 aa	Predicted RBP	13.95	□□□□□ -0.18
KCNMA1-280	ENST00000640311	CSB-PGBD3	P0DP91	1061 aa		13.95	□□□□□ -0.18
KCNMA1-280	ENST00000640311	TOM1L2	Q6ZVM7	507 aa		13.95	□□□□□ -0.18
KCNMA1-280	ENST00000640311	GGNBP2	Q9H3C7	697 aa		13.95	□□□□□ -0.18
KCNMA1-280	ENST00000640311	COL5A2	P05997	1499 aa	Predicted RBP	13.94	□□□□□ -0.18
KCNMA1-280	ENST00000640311	FYB1	O15117	783 aa		13.94	□□□□□ -0.18
KCNMA1-280	ENST00000640311	KRT27	Q7Z3Y8	459 aa		13.94	□□□□□ -0.18
KCNMA1-280	ENST00000640311	CARD14	Q9BXL6	1004 aa		13.94	□□□□□ -0.18
KCNMA1-280	ENST00000640311	LMO7	Q8WWI1	1683 aa		13.94	□□□□□ -0.18
KCNMA1-280	ENST00000640311	OVOS2	A0A0J9YW53	1432 aa		13.93	□□□□□ -0.18
KCNMA1-280	ENST00000640311	OVOS2	Q6IE36	1432 aa		13.93	□□□□□ -0.18
KCNMA1-280	ENST00000640311	NSD3	Q9BZ95	1437 aa		13.93	□□□□□ -0.18
KCNMA1-280	ENST00000640311	TCP11L2	Q8N4U5	519 aa		13.93	□□□□□ -0.18
KCNMA1-280	ENST00000640311	NFAT5	O94916	1531 aa		13.93	□□□□□ -0.18
KCNMA1-280	ENST00000640311	MYOM1	P52179	1685 aa		13.91	□□□□□ -0.18
KCNMA1-280	ENST00000640311	WDR17	Q8IZU2	1322 aa		13.91	□□□□□ -0.18
KCNMA1-280	ENST00000640311	CRB1	P82279	1406 aa		13.91	□□□□□ -0.18
KCNMA1-280	ENST00000640311	C11orf95	C9JLR9	678 aa	Predicted RBP	13.91	□□□□□ -0.18
KCNMA1-280	ENST00000640311	THRAP3	Q9Y2W1	955 aa	Known RBP	13.91	□□□□□ -0.18
KCNMA1-280	ENST00000640311	FBLN1	P23142	703 aa		13.9	□□□□□ -0.18
KCNMA1-280	ENST00000640311	AMPH	P49418	695 aa		13.9	□□□□□ -0.18
KCNMA1-280	ENST00000640311	BARGIN	Q6ZT62	677 aa		13.9	□□□□□ -0.18
KCNMA1-280	ENST00000640311	PANK3	Q9H999	370 aa		13.9	□□□□□ -0.18
KCNMA1-280	ENST00000640311	USP54	Q70EL1	1684 aa		13.9	□□□□□ -0.18
KCNMA1-280	ENST00000640311	CGNL1	Q0VF96	1302 aa		13.9	□□□□□ -0.19
KCNMA1-280	ENST00000640311	PDE3B	Q13370	1112 aa		13.89	□□□□□ -0.19
KCNMA1-280	ENST00000640311	FAM182B	Q5T319	152 aa		13.89	□□□□□ -0.19
KCNMA1-280	ENST00000640311	CNKSR2	Q8WXI2	1034 aa		13.89	□□□□□ -0.19
KCNMA1-280	ENST00000640311	RRS1	Q15050	365 aa	Known RBP	13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	ANKRD24	Q8TF21	1146 aa		13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	LTV1	Q96GA3	475 aa	Predicted RBP	13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	NLRP2	Q9NX02	1062 aa		13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	COL18A1	P39060	1754 aa		13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	KIF7	Q2M1P5	1343 aa		13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	MAP3K19	Q56UN5	1328 aa		13.88	□□□□□ -0.19
KCNMA1-280	ENST00000640311	SF3B2	Q13435	895 aa	Known RBP	13.87	□□□□□ -0.19
KCNMA1-280	ENST00000640311	CCDC125	Q86Z20	511 aa		13.87	□□□□□ -0.19
KCNMA1-280	ENST00000640311	IP6K1	Q92551	441 aa		13.87	□□□□□ -0.19
KCNMA1-280	ENST00000640311	BRWD3	Q6RI45	1802 aa		13.87	□□□□□ -0.19
KCNMA1-280	ENST00000640311	ERBB3	P21860	1342 aa		13.87	□□□□□ -0.19
KCNMA1-280	ENST00000640311	LTN1	O94822	1766 aa		13.86	□□□□□ -0.19
KCNMA1-280	ENST00000640311	ABCC6	O95255	1503 aa		13.86	□□□□□ -0.19
KCNMA1-280	ENST00000640311	HOXC9	P31274	260 aa		13.86	□□□□□ -0.19
KCNMA1-280	ENST00000640311	CARD10	Q9BWT7	1032 aa		13.86	□□□□□ -0.19
KCNMA1-280	ENST00000640311	THSD7A	Q9UPZ6	1657 aa		13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	BLM	P54132	1417 aa	Predicted RBP	13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	PPM1G	O15355	546 aa	Predicted RBP	13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	DDB1	Q16531	1140 aa		13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	RNF216	Q9NWF9	866 aa	Predicted RBP	13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	RGPD5	Q99666	1765 aa		13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	KIF20B	Q96Q89	1820 aa		13.85	□□□□□ -0.19
KCNMA1-280	ENST00000640311	TNNT2	P45379	298 aa	Predicted RBP	13.84	□□□□□ -0.19
KCNMA1-280	ENST00000640311	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.84	□□□□□ -0.19
KCNMA1-280	ENST00000640311	KNSTRN	Q9Y448	316 aa		13.84	□□□□□ -0.19
KCNMA1-280	ENST00000640311	CCDC7	Q96M83	1385 aa		13.83	□□□□□ -0.19
KCNMA1-280	ENST00000640311	FAM196A	Q6ZSG2	479 aa		13.83	□□□□□ -0.2
KCNMA1-280	ENST00000640311	C1QBP	Q07021	282 aa	Known RBP	13.82	□□□□□ -0.2
KCNMA1-280	ENST00000640311	RTL1	A6NKG5	1358 aa		13.82	□□□□□ -0.2
KCNMA1-280	ENST00000640311	EXOC5	O00471	708 aa		13.81	□□□□□ -0.2
KCNMA1-280	ENST00000640311	EMILIN1	Q9Y6C2	1016 aa		13.81	□□□□□ -0.2
KCNMA1-280	ENST00000640311	SMG6	Q86US8	1419 aa	Known RBP	13.81	□□□□□ -0.2
KCNMA1-280	ENST00000640311	IL2RB	P14784	551 aa		13.8	□□□□□ -0.2
KCNMA1-280	ENST00000640311	HSP90AB2P	Q58FF8	381 aa		13.8	□□□□□ -0.2
KCNMA1-280	ENST00000640311	MORC1	Q86VD1	984 aa		13.8	□□□□□ -0.2
KCNMA1-280	ENST00000640311	WASHC2A	Q641Q2	1341 aa		13.8	□□□□□ -0.2
KCNMA1-280	ENST00000640311	FLT4	P35916	1363 aa		13.8	□□□□□ -0.2
KCNMA1-280	ENST00000640311	TRIM37	O94972	964 aa		13.79	□□□□□ -0.2
KCNMA1-280	ENST00000640311	DEFB132	Q7Z7B7	95 aa		13.79	□□□□□ -0.2
KCNMA1-280	ENST00000640311	BAG6	P46379	1132 aa		13.78	□□□□□ -0.2
KCNMA1-280	ENST00000640311	CNGB1	Q14028	1251 aa	Predicted RBP	13.78	□□□□□ -0.2
KCNMA1-280	ENST00000640311	NSD2	O96028	1365 aa		13.78	□□□□□ -0.2
KCNMA1-280	ENST00000640311	INSR	P06213	1382 aa		13.78	□□□□□ -0.2
KCNMA1-280	ENST00000640311	PARP4	Q9UKK3	1724 aa	Known RBP	13.78	□□□□□ -0.2
KCNMA1-280	ENST00000640311	OVOS2	A0A0G2JMS6	1433 aa		13.77	□□□□□ -0.21
KCNMA1-280	ENST00000640311	KIF24	Q5T7B8	1368 aa		13.77	□□□□□ -0.21
KCNMA1-280	ENST00000640311	POLK	Q9UBT6	870 aa		13.77	□□□□□ -0.21
KCNMA1-280	ENST00000640311	LRRC37A3	O60309	1634 aa		13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	DISP2	A7MBM2	1401 aa		13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	APBA3	O96018	575 aa		13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	NBPF6	Q5VWK0	638 aa		13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	USHBP1	Q8N6Y0	703 aa		13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	MARCH10	Q8NA82	808 aa	Predicted RBP	13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	NBPF4	Q96M43	638 aa		13.76	□□□□□ -0.21
KCNMA1-280	ENST00000640311	CC2D1B	Q5T0F9	858 aa	Known RBP	13.75	□□□□□ -0.21
KCNMA1-280	ENST00000640311	WNK3	Q9BYP7	1800 aa		13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	EP400	Q96L91	3159 aa		13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	PEAK1	Q9H792	1746 aa		13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	EN1	Q05925	392 aa	Predicted RBP	13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	DDX54	Q8TDD1	881 aa	Known RBP	13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	RAPGEF4	Q8WZA2	1011 aa		13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	FAM208A	Q9UK61	1670 aa	Known RBP	13.74	□□□□□ -0.21
KCNMA1-280	ENST00000640311	TNS2	Q63HR2	1409 aa		13.73	□□□□□ -0.21
KCNMA1-280	ENST00000640311	ANKRD26	Q9UPS8	1709 aa		13.73	□□□□□ -0.21
KCNMA1-280	ENST00000640311	PER1	O15534	1290 aa	Predicted RBP	13.73	□□□□□ -0.21
KCNMA1-280	ENST00000640311	RGPD1	P0DJD0	1748 aa		13.73	□□□□□ -0.21
KCNMA1-280	ENST00000640311	TAT	P17735	454 aa	Predicted RBP	13.72	□□□□□ -0.21

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