RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 TRIM22Q8IYM9 498 aa21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 HSP90B2PQ58FF3 399 aa21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 SLC26A8Q96RN1 970 aa21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 SIL1Q9H173 461 aa21.85■■□□□ 1.09
KCNMA1-278ENST00000640141 MPHOSPH8Q99549 860 aa21.84■■□□□ 1.09
KCNMA1-278ENST00000640141 FIBPO43427 364 aa21.84■■□□□ 1.09
KCNMA1-278ENST00000640141 TSPY26PQ9H489 355 aa21.84■■□□□ 1.09
KCNMA1-278ENST00000640141 PRDM11Q9NQV5 511 aa21.84■■□□□ 1.09
KCNMA1-278ENST00000640141 MAGEC2Q9UBF1 373 aaPredicted RBP21.83■■□□□ 1.09
KCNMA1-278ENST00000640141 CCAR1Q8IX12 1150 aaKnown RBP21.83■■□□□ 1.09
KCNMA1-278ENST00000640141 SMARCE1Q969G3 411 aa21.83■■□□□ 1.09
KCNMA1-278ENST00000640141 POGZQ7Z3K3 1410 aa21.83■■□□□ 1.08
KCNMA1-278ENST00000640141 ZFYVE27Q5T4F4 411 aa21.83■■□□□ 1.08
KCNMA1-278ENST00000640141 RAPGEF3O95398 923 aa21.82■■□□□ 1.08
KCNMA1-278ENST00000640141 HECW1Q76N89 1606 aa21.82■■□□□ 1.08
KCNMA1-278ENST00000640141 SMC2O95347 1197 aa21.82■■□□□ 1.08
KCNMA1-278ENST00000640141 MYL6BP14649 208 aa21.82■■□□□ 1.08
KCNMA1-278ENST00000640141 DAPK1P53355 1430 aa21.81■■□□□ 1.08
KCNMA1-278ENST00000640141 CAGE1Q8TC20 777 aa21.81■■□□□ 1.08
KCNMA1-278ENST00000640141 FMNL2Q96PY5 1086 aa21.81■■□□□ 1.08
KCNMA1-278ENST00000640141 KRT18P05783 430 aaKnown RBP21.81■■□□□ 1.08
KCNMA1-278ENST00000640141 SRGAP3O43295 1099 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 CCP110O43303 1012 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 CHD1LQ86WJ1 897 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 NESP48681 1621 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 WDR33Q9C0J8 1336 aaKnown RBP21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 BTBD11A6QL63 1104 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 RDXP35241 583 aaKnown RBP21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 CEP126Q9P2H0 1117 aa21.8■■□□□ 1.08
KCNMA1-278ENST00000640141 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 RPAP2Q8IXW5 612 aaPredicted RBP21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 CCDC61Q9Y6R9 512 aa21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 RRS1Q15050 365 aaKnown RBP21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 PATL2C9JE40 543 aaKnown RBP21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 AACSQ86V21 672 aa21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 CCDC69A6NI79 296 aa21.79■■□□□ 1.08
KCNMA1-278ENST00000640141 NFE2L2Q16236 605 aa21.78■■□□□ 1.08
KCNMA1-278ENST00000640141 CEBPZQ03701 1054 aaKnown RBP21.78■■□□□ 1.08
KCNMA1-278ENST00000640141 ERCC4Q92889 916 aaPredicted RBP21.78■■□□□ 1.08
KCNMA1-278ENST00000640141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.78■■□□□ 1.085e-14■■■■■ 211.5
KCNMA1-278ENST00000640141 CTNNA3Q9UI47 895 aa21.78■■□□□ 1.08
KCNMA1-278ENST00000640141 K7ELQ4 463 aaPredicted RBP21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 ATP2B2Q01814 1243 aa21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 MYO6Q9UM54 1294 aa21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 NUTM2BA6NNL0 878 aaPredicted RBP21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 NUTM2EB1AL46 878 aaPredicted RBP21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 DHX8Q14562 1220 aaKnown RBP21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 BLOC1S2Q6QNY1 142 aa21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 NUTM2AQ8IVF1 878 aaPredicted RBP21.77■■□□□ 1.08
KCNMA1-278ENST00000640141 TMEM132AQ24JP5 1023 aa21.77■■□□□ 1.07
KCNMA1-278ENST00000640141 KRT85P78386 507 aa21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 SF3B2Q13435 895 aaKnown RBP21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 STK3Q13188 491 aa21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 NUDT16Q96DE0 195 aaKnown RBP21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
KCNMA1-278ENST00000640141 FKBP4Q02790 459 aaKnown RBP eCLIP21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 WWC2Q6AWC2 1192 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 DCAF8L1A6NGE4 600 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 TTLL5Q6EMB2 1281 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 DACH1Q9UI36 760 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 POLA1P09884 1462 aaPredicted RBP21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 CDKL5O76039 1030 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 CCDC192P0DO97 292 aa21.75■■□□□ 1.07
KCNMA1-278ENST00000640141 LARP1BQ659C4 914 aaKnown RBP21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 ZSCAN31Q96LW9 406 aaPredicted RBP21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 KRT32Q14532 448 aa21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 GNAT3A8MTJ3 354 aa21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 ME1P48163 572 aa21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 TMPOP42166 694 aaKnown RBP21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 BRPF1P55201 1214 aaPredicted RBP21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 STIM1Q13586 685 aa21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 SYCP1Q15431 976 aa21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 ZNHIT6Q9NWK9 470 aaKnown RBP21.74■■□□□ 1.07
KCNMA1-278ENST00000640141 MAP4K4O95819 1239 aaPredicted RBP21.73■■□□□ 1.07
KCNMA1-278ENST00000640141 BACH2Q9BYV9 841 aa21.73■■□□□ 1.07
KCNMA1-278ENST00000640141 NOL7Q9UMY1 257 aaKnown RBP21.73■■□□□ 1.07
KCNMA1-278ENST00000640141 TIAM1Q13009 1591 aa21.73■■□□□ 1.07
KCNMA1-278ENST00000640141 NSD3Q9BZ95 1437 aa21.73■■□□□ 1.07
KCNMA1-278ENST00000640141 NUP133Q8WUM0 1156 aa21.72■■□□□ 1.07
KCNMA1-278ENST00000640141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.72■■□□□ 1.07
KCNMA1-278ENST00000640141 KRI1Q8N9T8 703 aaKnown RBP21.72■■□□□ 1.07
KCNMA1-278ENST00000640141 VSIG10Q8N0Z9 540 aa21.72■■□□□ 1.07
KCNMA1-278ENST00000640141 TNMDQ9H2S6 317 aa21.72■■□□□ 1.07
KCNMA1-278ENST00000640141 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
KCNMA1-278ENST00000640141 SERPINC1P01008 464 aa21.71■■□□□ 1.07
KCNMA1-278ENST00000640141 PDRG1Q9NUG6 133 aa21.71■■□□□ 1.07
KCNMA1-278ENST00000640141 PDIA4P13667 645 aaKnown RBP21.7■■□□□ 1.06
KCNMA1-278ENST00000640141 UBAC1Q9BSL1 405 aa21.7■■□□□ 1.06
KCNMA1-278ENST00000640141 TDO2P48775 406 aa21.7■■□□□ 1.06
KCNMA1-278ENST00000640141 MTERF4Q7Z6M4 381 aaKnown RBP21.7■■□□□ 1.06
KCNMA1-278ENST00000640141 IL1RAPL2Q9NP60 686 aa21.7■■□□□ 1.06
KCNMA1-278ENST00000640141 STK11IPQ8N1F8 1099 aa21.7■■□□□ 1.06
KCNMA1-278ENST00000640141 STARD3NLO95772 234 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms