RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 NKX1-1Q15270 411 aaPredicted RBP9.3□□□□□ -0.92
RTTN-215ENST00000639487 AFDNP55196 1824 aaKnown RBP9.29□□□□□ -0.92
RTTN-215ENST00000639487 ZNF335Q9H4Z2 1342 aaPredicted RBP9.29□□□□□ -0.92
RTTN-215ENST00000639487 PLEKHG5O94827 1062 aa9.28□□□□□ -0.92
RTTN-215ENST00000639487 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
RTTN-215ENST00000639487 COL15A1P39059 1388 aa9.28□□□□□ -0.92
RTTN-215ENST00000639487 KCNH5Q8NCM2 988 aa9.28□□□□□ -0.92
RTTN-215ENST00000639487 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.92
RTTN-215ENST00000639487 C10orf71Q711Q0 1435 aa9.27□□□□□ -0.93
RTTN-215ENST00000639487 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
RTTN-215ENST00000639487 FLT4P35916 1363 aa9.26□□□□□ -0.93
RTTN-215ENST00000639487 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
RTTN-215ENST00000639487 FOCADQ5VW36 1801 aa9.26□□□□□ -0.93
RTTN-215ENST00000639487 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
RTTN-215ENST00000639487 CEBPAP49715 358 aaPredicted RBP9.26□□□□□ -0.93
RTTN-215ENST00000639487 VPS72Q15906 364 aa9.26□□□□□ -0.93
RTTN-215ENST00000639487 SPEF2Q9C093 1822 aa9.25□□□□□ -0.93
RTTN-215ENST00000639487 KIAA0232Q92628 1395 aa9.25□□□□□ -0.93
RTTN-215ENST00000639487 ATP10DQ9P241 1426 aa9.25□□□□□ -0.93
RTTN-215ENST00000639487 ADAMTSL1Q8N6G6 1762 aa9.25□□□□□ -0.93
RTTN-215ENST00000639487 LRRC59Q96AG4 307 aaKnown RBP9.24□□□□□ -0.93
RTTN-215ENST00000639487 SLAIN2Q9P270 581 aa9.24□□□□□ -0.93
RTTN-215ENST00000639487 CHIC2Q9UKJ5 165 aa9.24□□□□□ -0.93
RTTN-215ENST00000639487 NUP98P52948 1817 aa9.24□□□□□ -0.93
RTTN-215ENST00000639487 COL4A1P02462 1669 aa9.23□□□□□ -0.93
RTTN-215ENST00000639487 ANKRD31Q8N7Z5 1873 aa9.23□□□□□ -0.93
RTTN-215ENST00000639487 TMF1P82094 1093 aa9.23□□□□□ -0.93
RTTN-215ENST00000639487 IGSF1Q8N6C5 1336 aa9.23□□□□□ -0.93
RTTN-215ENST00000639487 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
RTTN-215ENST00000639487 AMER1Q5JTC6 1135 aaPredicted RBP9.22□□□□□ -0.93
RTTN-215ENST00000639487 FER1L6Q2WGJ9 1857 aa9.21□□□□□ -0.93
RTTN-215ENST00000639487 DOCK2Q92608 1830 aa9.21□□□□□ -0.93
RTTN-215ENST00000639487 ATP1B4Q9UN42 357 aaPredicted RBP9.2□□□□□ -0.94
RTTN-215ENST00000639487 SPATA31A5Q5VU36 1347 aa9.2□□□□□ -0.94
RTTN-215ENST00000639487 SPATA31A7Q8IWB4 1347 aa9.2□□□□□ -0.94
RTTN-215ENST00000639487 CFAP70Q5T0N1 1121 aa9.2□□□□□ -0.94
RTTN-215ENST00000639487 RALBP1Q15311 655 aa9.19□□□□□ -0.94
RTTN-215ENST00000639487 ARHGEF25Q86VW2 580 aa9.18□□□□□ -0.94
RTTN-215ENST00000639487 PHF8Q9UPP1 1060 aa9.18□□□□□ -0.94
RTTN-215ENST00000639487 EHMT2Q96KQ7 1210 aa9.18□□□□□ -0.94
RTTN-215ENST00000639487 IL16Q14005 1332 aa9.18□□□□□ -0.94
RTTN-215ENST00000639487 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
RTTN-215ENST00000639487 NUDT16Q96DE0 195 aaKnown RBP9.18□□□□□ -0.94
RTTN-215ENST00000639487 TERF2IPQ9NYB0 399 aa9.18□□□□□ -0.94
RTTN-215ENST00000639487 TIAM2Q8IVF5 1701 aa9.17□□□□□ -0.94
RTTN-215ENST00000639487 LOC285556D6RIA3 1793 aa9.17□□□□□ -0.94
RTTN-215ENST00000639487 RBBP6Q7Z6E9 1792 aaKnown RBP9.17□□□□□ -0.94
RTTN-215ENST00000639487 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
RTTN-215ENST00000639487 EIF4G2P78344 907 aaKnown RBP eCLIP9.17□□□□□ -0.94
RTTN-215ENST00000639487 BRPF1P55201 1214 aaPredicted RBP9.16□□□□□ -0.94
RTTN-215ENST00000639487 COL11A2P13942 1736 aaPredicted RBP9.16□□□□□ -0.94
RTTN-215ENST00000639487 KIF7Q2M1P5 1343 aa9.16□□□□□ -0.94
RTTN-215ENST00000639487 WDR17Q8IZU2 1322 aa9.16□□□□□ -0.94
RTTN-215ENST00000639487 ZNF772Q68DY9 489 aaPredicted RBP9.15□□□□□ -0.94
RTTN-215ENST00000639487 PRAM1Q96QH2 718 aa9.15□□□□□ -0.94
RTTN-215ENST00000639487 CARD10Q9BWT7 1032 aa9.15□□□□□ -0.94
RTTN-215ENST00000639487 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
RTTN-215ENST00000639487 WDR90Q96KV7 1748 aa9.14□□□□□ -0.95
RTTN-215ENST00000639487 CCER2I3L3R5 266 aa9.14□□□□□ -0.95
RTTN-215ENST00000639487 DCAF11Q8TEB1 546 aa9.14□□□□□ -0.95
RTTN-215ENST00000639487 IP6K1Q92551 441 aa9.14□□□□□ -0.95
RTTN-215ENST00000639487 SPATA31A1Q5TZJ5 1347 aa9.14□□□□□ -0.95
RTTN-215ENST00000639487 DDX60LQ5H9U9 1706 aaKnown RBP9.14□□□□□ -0.95
RTTN-215ENST00000639487 MEGF6O75095 1541 aa9.13□□□□□ -0.95
RTTN-215ENST00000639487 IGSF3O75054 1194 aa9.13□□□□□ -0.95
RTTN-215ENST00000639487 ACEP12821 1306 aa9.12□□□□□ -0.95
RTTN-215ENST00000639487 CHD4Q14839 1912 aa9.12□□□□□ -0.95
RTTN-215ENST00000639487 ERBB4Q15303 1308 aa9.12□□□□□ -0.95
RTTN-215ENST00000639487 PROSER2Q86WR7 435 aaPredicted RBP9.11□□□□□ -0.95
RTTN-215ENST00000639487 TRIM52Q96A61 297 aa9.11□□□□□ -0.95
RTTN-215ENST00000639487 ATF3P18847 181 aa9.11□□□□□ -0.95
RTTN-215ENST00000639487 SBF1O95248 1867 aa9.1□□□□□ -0.95
RTTN-215ENST00000639487 RNF123Q5XPI4 1314 aa9.1□□□□□ -0.95
RTTN-215ENST00000639487 TAF1P21675 1872 aa9.1□□□□□ -0.95
RTTN-215ENST00000639487 ZNF521Q96K83 1311 aa9.09□□□□□ -0.95
RTTN-215ENST00000639487 NBPF1Q3BBV0 1214 aa9.09□□□□□ -0.95
RTTN-215ENST00000639487 KDM6AO15550 1401 aaPredicted RBP9.09□□□□□ -0.95
RTTN-215ENST00000639487 HOXB7P09629 217 aa9.08□□□□□ -0.96
RTTN-215ENST00000639487 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
RTTN-215ENST00000639487 MYH14Q7Z406 1995 aaKnown RBP9.08□□□□□ -0.96
RTTN-215ENST00000639487 SCN4AP35499 1836 aa9.08□□□□□ -0.96
RTTN-215ENST00000639487 HDGFL2Q7Z4V5 671 aaPredicted RBP9.08□□□□□ -0.96
RTTN-215ENST00000639487 NLRP13Q86W25 1043 aa9.08□□□□□ -0.96
RTTN-215ENST00000639487 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
RTTN-215ENST00000639487 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
RTTN-215ENST00000639487 LAMA4Q16363 1823 aa9.06□□□□□ -0.96
RTTN-215ENST00000639487 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
RTTN-215ENST00000639487 CT47B1P0C2W7 299 aaPredicted RBP9.06□□□□□ -0.96
RTTN-215ENST00000639487 VSIG10Q8N0Z9 540 aa9.06□□□□□ -0.96
RTTN-215ENST00000639487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.06□□□□□ -0.96
RTTN-215ENST00000639487 UNC5CLQ8IV45 518 aa9.06□□□□□ -0.96
RTTN-215ENST00000639487 CARD14Q9BXL6 1004 aa9.06□□□□□ -0.96
RTTN-215ENST00000639487 MYBBP1AQ9BQG0 1328 aaKnown RBP9.05□□□□□ -0.96
RTTN-215ENST00000639487 HSPA5P11021 654 aaKnown RBP9.04□□□□□ -0.96
RTTN-215ENST00000639487 TRMT2AQ8IZ69 625 aaKnown RBP9.04□□□□□ -0.96
RTTN-215ENST00000639487 FYB1O15117 783 aa9.04□□□□□ -0.96
RTTN-215ENST00000639487 PLSCR1O15162 318 aa9.04□□□□□ -0.96
RTTN-215ENST00000639487 KRT28Q7Z3Y7 464 aa9.04□□□□□ -0.96
RTTN-215ENST00000639487 PLEKHF1Q96S99 279 aa9.04□□□□□ -0.96
RTTN-215ENST00000639487 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms