RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 TTC21BQ7Z4L5 1316 aa11.94□□□□□ -0.5
SMG7-216ENST00000638826 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
SMG7-216ENST00000638826 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
SMG7-216ENST00000638826 YY1P25490 414 aa11.93□□□□□ -0.5
SMG7-216ENST00000638826 AXIN2Q9Y2T1 843 aa11.93□□□□□ -0.5
SMG7-216ENST00000638826 EXOC5O00471 708 aa11.92□□□□□ -0.5
SMG7-216ENST00000638826 CCDC7Q96M83 1385 aa11.92□□□□□ -0.5
SMG7-216ENST00000638826 PARP4Q9UKK3 1724 aaKnown RBP11.91□□□□□ -0.5
SMG7-216ENST00000638826 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
SMG7-216ENST00000638826 RREB1Q92766 1687 aa11.91□□□□□ -0.5
SMG7-216ENST00000638826 SOX12O15370 315 aa11.9□□□□□ -0.5
SMG7-216ENST00000638826 STK32BQ9NY57 414 aa11.9□□□□□ -0.5
SMG7-216ENST00000638826 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
SMG7-216ENST00000638826 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
SMG7-216ENST00000638826 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
SMG7-216ENST00000638826 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
SMG7-216ENST00000638826 NUP188Q5SRE5 1749 aa11.88□□□□□ -0.51
SMG7-216ENST00000638826 QRICH2Q9H0J4 1663 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 ABCC6O95255 1503 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
SMG7-216ENST00000638826 PROM2Q8N271 834 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 SIN3AQ96ST3 1273 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 USP31Q70CQ4 1352 aa11.87□□□□□ -0.51
SMG7-216ENST00000638826 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 LRRC37A3O60309 1634 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 PEAK1Q9H792 1746 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 SLC15A2Q16348 729 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.86□□□□□ -0.512e-6■■□□□ 12.3
SMG7-216ENST00000638826 NLRP2Q9NX02 1062 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 PIK3C2AO00443 1686 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 ERBB3P21860 1342 aa11.86□□□□□ -0.51
SMG7-216ENST00000638826 RGPD3A6NKT7 1758 aaPredicted RBP11.85□□□□□ -0.51
SMG7-216ENST00000638826 RGPD4Q7Z3J3 1758 aa11.85□□□□□ -0.51
SMG7-216ENST00000638826 IL2RBP14784 551 aa11.85□□□□□ -0.51
SMG7-216ENST00000638826 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
SMG7-216ENST00000638826 MTFR1LQ9H019 292 aa11.85□□□□□ -0.51
SMG7-216ENST00000638826 TERF2IPQ9NYB0 399 aa11.85□□□□□ -0.51
SMG7-216ENST00000638826 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
SMG7-216ENST00000638826 NFAT5O94916 1531 aa11.84□□□□□ -0.51
SMG7-216ENST00000638826 PTGER2P43116 358 aa11.83□□□□□ -0.52
SMG7-216ENST00000638826 PUS7Q96PZ0 661 aaKnown RBP11.83□□□□□ -0.52
SMG7-216ENST00000638826 COL18A1P39060 1754 aa11.82□□□□□ -0.52
SMG7-216ENST00000638826 SLC24A1O60721 1099 aa11.82□□□□□ -0.52
SMG7-216ENST00000638826 NME9Q86XW9 330 aa11.82□□□□□ -0.52
SMG7-216ENST00000638826 ANKRD24Q8TF21 1146 aa11.82□□□□□ -0.52
SMG7-216ENST00000638826 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
SMG7-216ENST00000638826 ATF5Q9Y2D1 282 aaPredicted RBP11.82□□□□□ -0.52
SMG7-216ENST00000638826 EDC4Q6P2E9 1401 aaKnown RBP11.81□□□□□ -0.52
SMG7-216ENST00000638826 ACSBG1Q96GR2 724 aa11.81□□□□□ -0.52
SMG7-216ENST00000638826 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
SMG7-216ENST00000638826 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
SMG7-216ENST00000638826 SLC12A5Q9H2X9 1139 aa11.8□□□□□ -0.52
SMG7-216ENST00000638826 SLC27A3Q5K4L6 730 aa11.79□□□□□ -0.52
SMG7-216ENST00000638826 IP6K1Q92551 441 aa11.79□□□□□ -0.52
SMG7-216ENST00000638826 ARXQ96QS3 562 aa11.79□□□□□ -0.52
SMG7-216ENST00000638826 SLC16A10Q8TF71 515 aa11.78□□□□□ -0.52
SMG7-216ENST00000638826 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
SMG7-216ENST00000638826 TONSLQ96HA7 1378 aa11.78□□□□□ -0.52
SMG7-216ENST00000638826 CD163L1Q9NR16 1453 aa11.77□□□□□ -0.52
SMG7-216ENST00000638826 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
SMG7-216ENST00000638826 COG3Q96JB2 828 aa11.77□□□□□ -0.53
SMG7-216ENST00000638826 A0A1W2PP64 1363 aa11.77□□□□□ -0.53
SMG7-216ENST00000638826 MAP3K5Q99683 1374 aa11.77□□□□□ -0.53
SMG7-216ENST00000638826 HMGB2P26583 209 aaKnown RBP11.76□□□□□ -0.53
SMG7-216ENST00000638826 POLD1P28340 1107 aa11.76□□□□□ -0.53
SMG7-216ENST00000638826 DDX54Q8TDD1 881 aaKnown RBP11.76□□□□□ -0.53
SMG7-216ENST00000638826 AKAP12Q02952 1782 aa11.76□□□□□ -0.53
SMG7-216ENST00000638826 ZNF784Q8NCA9 323 aaPredicted RBP11.75□□□□□ -0.53
SMG7-216ENST00000638826 SBF2Q86WG5 1849 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 WNK3Q9BYP7 1800 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 AMPHP49418 695 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 ZNF827Q17R98 1081 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 SYTL4Q96C24 671 aaPredicted RBP11.74□□□□□ -0.53
SMG7-216ENST00000638826 LTV1Q96GA3 475 aaPredicted RBP11.74□□□□□ -0.53
SMG7-216ENST00000638826 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 NHSQ6T4R5 1651 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 MON2Q7Z3U7 1717 aa11.74□□□□□ -0.53
SMG7-216ENST00000638826 USP54Q70EL1 1684 aa11.73□□□□□ -0.53
SMG7-216ENST00000638826 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
SMG7-216ENST00000638826 ZCRB1Q8TBF4 217 aaKnown RBP11.73□□□□□ -0.53
SMG7-216ENST00000638826 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
SMG7-216ENST00000638826 TFCP2L1Q9NZI6 479 aa11.73□□□□□ -0.53
SMG7-216ENST00000638826 UTRNP46939 3433 aa11.73□□□□□ -0.53
SMG7-216ENST00000638826 CGNL1Q0VF96 1302 aa11.72□□□□□ -0.53
SMG7-216ENST00000638826 MAP3K19Q56UN5 1328 aa11.72□□□□□ -0.53
SMG7-216ENST00000638826 HOXC9P31274 260 aa11.72□□□□□ -0.53
SMG7-216ENST00000638826 PRIM1P49642 420 aaKnown RBP11.72□□□□□ -0.53
SMG7-216ENST00000638826 GPR162Q16538 588 aa11.72□□□□□ -0.53
SMG7-216ENST00000638826 MYOM1P52179 1685 aa11.71□□□□□ -0.53
SMG7-216ENST00000638826 RTL1A6NKG5 1358 aa11.71□□□□□ -0.53
SMG7-216ENST00000638826 ST20-MTHFSA0A0A6YYL1 179 aa11.71□□□□□ -0.53
SMG7-216ENST00000638826 TESK2Q96S53 571 aa11.71□□□□□ -0.53
SMG7-216ENST00000638826 KLHL34Q8N239 644 aa11.7□□□□□ -0.54
SMG7-216ENST00000638826 RAPGEF4Q8WZA2 1011 aa11.7□□□□□ -0.54
SMG7-216ENST00000638826 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
SMG7-216ENST00000638826 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 243.4 ms