RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 RRP1P56182 461 aaKnown RBP12.98□□□□□ -0.33
ATM-226ENST00000638443 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
ATM-226ENST00000638443 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
ATM-226ENST00000638443 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
ATM-226ENST00000638443 CDK11BP21127 795 aaKnown RBP12.97□□□□□ -0.33
ATM-226ENST00000638443 IL13P35225 146 aa12.97□□□□□ -0.33
ATM-226ENST00000638443 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
ATM-226ENST00000638443 ESCO1Q5FWF5 840 aa12.97□□□□□ -0.33
ATM-226ENST00000638443 PROSER2Q86WR7 435 aaPredicted RBP12.97□□□□□ -0.33
ATM-226ENST00000638443 ORAI2Q96SN7 254 aa12.97□□□□□ -0.33
ATM-226ENST00000638443 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
ATM-226ENST00000638443 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.33
ATM-226ENST00000638443 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
ATM-226ENST00000638443 USP31Q70CQ4 1352 aa12.96□□□□□ -0.34
ATM-226ENST00000638443 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.34
ATM-226ENST00000638443 PRKAR2BP31323 418 aa12.95□□□□□ -0.34
ATM-226ENST00000638443 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
ATM-226ENST00000638443 TRMT2AQ8IZ69 625 aaKnown RBP12.95□□□□□ -0.34
ATM-226ENST00000638443 ARID3AQ99856 593 aa12.95□□□□□ -0.34
ATM-226ENST00000638443 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
ATM-226ENST00000638443 MAP3K19Q56UN5 1328 aa12.94□□□□□ -0.34
ATM-226ENST00000638443 MAPK8IP3Q9UPT6 1336 aa12.94□□□□□ -0.34
ATM-226ENST00000638443 NLRP6P59044 892 aa12.94□□□□□ -0.34
ATM-226ENST00000638443 HSP90AB2PQ58FF8 381 aa12.94□□□□□ -0.34
ATM-226ENST00000638443 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
ATM-226ENST00000638443 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
ATM-226ENST00000638443 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
ATM-226ENST00000638443 E9PSI1 815 aa12.93□□□□□ -0.34
ATM-226ENST00000638443 BRPF1P55201 1214 aaPredicted RBP12.93□□□□□ -0.34
ATM-226ENST00000638443 EIF4A2Q14240 407 aaKnown RBP12.93□□□□□ -0.34
ATM-226ENST00000638443 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
ATM-226ENST00000638443 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
ATM-226ENST00000638443 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
ATM-226ENST00000638443 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
ATM-226ENST00000638443 ABTB2Q8N961 1025 aa12.92□□□□□ -0.34
ATM-226ENST00000638443 NECTIN2Q92692 538 aa12.92□□□□□ -0.34
ATM-226ENST00000638443 FOXO3O43524 673 aa12.92□□□□□ -0.34
ATM-226ENST00000638443 C20orf194Q5TEA3 1177 aa12.92□□□□□ -0.34
ATM-226ENST00000638443 EXOC6Q8TAG9 804 aa12.91□□□□□ -0.34
ATM-226ENST00000638443 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
ATM-226ENST00000638443 RIPK4P57078 832 aa12.91□□□□□ -0.34
ATM-226ENST00000638443 CCDC27Q2M243 656 aa12.91□□□□□ -0.34
ATM-226ENST00000638443 TSR2Q969E8 191 aaKnown RBP12.91□□□□□ -0.34
ATM-226ENST00000638443 FCHSD2O94868 740 aa12.9□□□□□ -0.34
ATM-226ENST00000638443 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
ATM-226ENST00000638443 DDX17Q92841 729 aaKnown RBP12.9□□□□□ -0.34
ATM-226ENST00000638443 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
ATM-226ENST00000638443 MSH5O43196 834 aa12.89□□□□□ -0.35
ATM-226ENST00000638443 BCAR3O75815 825 aa12.89□□□□□ -0.35
ATM-226ENST00000638443 THUMPD2Q9BTF0 503 aaKnown RBP12.89□□□□□ -0.35
ATM-226ENST00000638443 PSME1Q06323 249 aa12.89□□□□□ -0.35
ATM-226ENST00000638443 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 WDR63Q8IWG1 891 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 C19orf44Q9H6X5 657 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 SBNO1A3KN83 1393 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 FLT4P35916 1363 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 MST1RQ04912 1400 aa12.88□□□□□ -0.35
ATM-226ENST00000638443 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
ATM-226ENST00000638443 AMPHP49418 695 aa12.87□□□□□ -0.35
ATM-226ENST00000638443 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
ATM-226ENST00000638443 XIRP1Q702N8 1843 aaKnown RBP12.86□□□□□ -0.35
ATM-226ENST00000638443 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
ATM-226ENST00000638443 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
ATM-226ENST00000638443 ZBTB7CA1YPR0 619 aa12.86□□□□□ -0.35
ATM-226ENST00000638443 FAM83GA6ND36 823 aa12.86□□□□□ -0.35
ATM-226ENST00000638443 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
ATM-226ENST00000638443 LMOD2Q6P5Q4 547 aa12.86□□□□□ -0.35
ATM-226ENST00000638443 NFAT5O94916 1531 aa12.86□□□□□ -0.35
ATM-226ENST00000638443 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
ATM-226ENST00000638443 LTN1O94822 1766 aa12.85□□□□□ -0.35
ATM-226ENST00000638443 HOXC9P31274 260 aa12.85□□□□□ -0.35
ATM-226ENST00000638443 NFE2L2Q16236 605 aa12.85□□□□□ -0.35
ATM-226ENST00000638443 DCTN1Q14203 1278 aa12.85□□□□□ -0.35
ATM-226ENST00000638443 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
ATM-226ENST00000638443 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
ATM-226ENST00000638443 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
ATM-226ENST00000638443 ATF3P18847 181 aa12.84□□□□□ -0.35
ATM-226ENST00000638443 MYCNP04198 464 aaPredicted RBP12.83□□□□□ -0.35
ATM-226ENST00000638443 PNNQ9H307 717 aaKnown RBP12.83□□□□□ -0.35
ATM-226ENST00000638443 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 NEFMP07197 916 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 EXOSC9Q06265 439 aaKnown RBP12.83□□□□□ -0.36
ATM-226ENST00000638443 KRT28Q7Z3Y7 464 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 CCDC136Q96JN2 1154 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 EYA1Q99502 592 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
ATM-226ENST00000638443 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
ATM-226ENST00000638443 USHBP1Q8N6Y0 703 aa12.82□□□□□ -0.36
ATM-226ENST00000638443 MYH16Q9H6N6 1097 aa12.82□□□□□ -0.36
ATM-226ENST00000638443 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
ATM-226ENST00000638443 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
ATM-226ENST00000638443 DCCP43146 1447 aa12.81□□□□□ -0.36
ATM-226ENST00000638443 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
ATM-226ENST00000638443 MSH6P52701 1360 aa12.81□□□□□ -0.36
ATM-226ENST00000638443 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
ATM-226ENST00000638443 FRAT1Q92837 279 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms