RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 ABCA3Q99758 1704 aa20.42■□□□□ 0.86
CTSD-211ENST00000637387 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
CTSD-211ENST00000637387 TNS3Q68CZ2 1445 aa20.41■□□□□ 0.86
CTSD-211ENST00000637387 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
CTSD-211ENST00000637387 NLRP6P59044 892 aa20.41■□□□□ 0.86
CTSD-211ENST00000637387 ABTB2Q8N961 1025 aa20.41■□□□□ 0.86
CTSD-211ENST00000637387 USP21Q9UK80 565 aa20.41■□□□□ 0.86
CTSD-211ENST00000637387 SENP3-EIF4A1A0A087X0R7 540 aa20.4■□□□□ 0.86
CTSD-211ENST00000637387 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
CTSD-211ENST00000637387 USP19O94966 1318 aa20.39■□□□□ 0.85
CTSD-211ENST00000637387 BCL9LQ86UU0 1499 aa20.38■□□□□ 0.85
CTSD-211ENST00000637387 ATRNO75882 1429 aa20.38■□□□□ 0.85
CTSD-211ENST00000637387 MAP3K19Q56UN5 1328 aa20.38■□□□□ 0.85
CTSD-211ENST00000637387 TRPC5Q9UL62 973 aaPredicted RBP20.38■□□□□ 0.85
CTSD-211ENST00000637387 RGS12O14924 1447 aa20.37■□□□□ 0.85
CTSD-211ENST00000637387 DIAPH1O60610 1272 aaKnown RBP20.36■□□□□ 0.85
CTSD-211ENST00000637387 CCDC146Q8IYE0 955 aa20.36■□□□□ 0.85
CTSD-211ENST00000637387 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.853e-13■■■■■ 45.1
CTSD-211ENST00000637387 RGPD5Q99666 1765 aa20.36■□□□□ 0.85
CTSD-211ENST00000637387 PPM1GO15355 546 aaPredicted RBP20.35■□□□□ 0.85
CTSD-211ENST00000637387 FLT4P35916 1363 aa20.35■□□□□ 0.85
CTSD-211ENST00000637387 SLIT2O94813 1529 aa20.35■□□□□ 0.85
CTSD-211ENST00000637387 SOX12O15370 315 aa20.34■□□□□ 0.85
CTSD-211ENST00000637387 IL13P35225 146 aa20.34■□□□□ 0.85
CTSD-211ENST00000637387 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
CTSD-211ENST00000637387 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
CTSD-211ENST00000637387 RGPD2P0DJD1 1756 aa20.34■□□□□ 0.85
CTSD-211ENST00000637387 COL18A1P39060 1754 aa20.33■□□□□ 0.85
CTSD-211ENST00000637387 RTL1A6NKG5 1358 aa20.33■□□□□ 0.84
CTSD-211ENST00000637387 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.84
CTSD-211ENST00000637387 CABLES1Q8TDN4 633 aa20.32■□□□□ 0.84
CTSD-211ENST00000637387 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.31■□□□□ 0.84
CTSD-211ENST00000637387 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
CTSD-211ENST00000637387 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
CTSD-211ENST00000637387 CAMTA1Q9Y6Y1 1673 aa20.31■□□□□ 0.84
CTSD-211ENST00000637387 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
CTSD-211ENST00000637387 ZNF521Q96K83 1311 aa20.3■□□□□ 0.84
CTSD-211ENST00000637387 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
CTSD-211ENST00000637387 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
CTSD-211ENST00000637387 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
CTSD-211ENST00000637387 UNC5CLQ8IV45 518 aa20.29■□□□□ 0.84
CTSD-211ENST00000637387 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
CTSD-211ENST00000637387 APAF1O14727 1248 aa20.29■□□□□ 0.84
CTSD-211ENST00000637387 LMOD2Q6P5Q4 547 aa20.29■□□□□ 0.84
CTSD-211ENST00000637387 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
CTSD-211ENST00000637387 GJD4Q96KN9 370 aaPredicted RBP20.28■□□□□ 0.84
CTSD-211ENST00000637387 HOXC9P31274 260 aa20.27■□□□□ 0.84
CTSD-211ENST00000637387 KCNH5Q8NCM2 988 aa20.27■□□□□ 0.84
CTSD-211ENST00000637387 RSPH6AQ9H0K4 717 aa20.27■□□□□ 0.84
CTSD-211ENST00000637387 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
CTSD-211ENST00000637387 ABCC6O95255 1503 aa20.26■□□□□ 0.83
CTSD-211ENST00000637387 GCP02774 474 aa20.26■□□□□ 0.83
CTSD-211ENST00000637387 LMO7Q8WWI1 1683 aa20.25■□□□□ 0.83
CTSD-211ENST00000637387 HAP1P54257 671 aaPredicted RBP20.25■□□□□ 0.83
CTSD-211ENST00000637387 AMPHP49418 695 aa20.24■□□□□ 0.83
CTSD-211ENST00000637387 ARHGEF25Q86VW2 580 aa20.24■□□□□ 0.83
CTSD-211ENST00000637387 GLI3P10071 1580 aa20.24■□□□□ 0.83
CTSD-211ENST00000637387 NWD2Q9ULI1 1742 aa20.24■□□□□ 0.83
CTSD-211ENST00000637387 FAM83GA6ND36 823 aa20.23■□□□□ 0.83
CTSD-211ENST00000637387 TCP11L2Q8N4U5 519 aa20.23■□□□□ 0.83
CTSD-211ENST00000637387 FAM208AQ9UK61 1670 aaKnown RBP20.23■□□□□ 0.83
CTSD-211ENST00000637387 PLCH1Q4KWH8 1693 aa20.22■□□□□ 0.83
CTSD-211ENST00000637387 KDRP35968 1356 aa20.22■□□□□ 0.83
CTSD-211ENST00000637387 PLEKHG5O94827 1062 aa20.22■□□□□ 0.83
CTSD-211ENST00000637387 FCHSD2O94868 740 aa20.22■□□□□ 0.83
CTSD-211ENST00000637387 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
CTSD-211ENST00000637387 HMOX1P09601 288 aa20.21■□□□□ 0.83
CTSD-211ENST00000637387 VPS72Q15906 364 aa20.21■□□□□ 0.83
CTSD-211ENST00000637387 IP6K1Q92551 441 aa20.21■□□□□ 0.83
CTSD-211ENST00000637387 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
CTSD-211ENST00000637387 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
CTSD-211ENST00000637387 AEBP1Q8IUX7 1158 aa20.2■□□□□ 0.82
CTSD-211ENST00000637387 NGEFQ8N5V2 710 aa20.2■□□□□ 0.82
CTSD-211ENST00000637387 NCAPD2Q15021 1401 aa20.19■□□□□ 0.82
CTSD-211ENST00000637387 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
CTSD-211ENST00000637387 CDCA7LQ96GN5 454 aa20.19■□□□□ 0.82
CTSD-211ENST00000637387 RRP7AQ9Y3A4 280 aaKnown RBP20.19■□□□□ 0.82
CTSD-211ENST00000637387 CPDO75976 1380 aa20.18■□□□□ 0.82
CTSD-211ENST00000637387 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
CTSD-211ENST00000637387 COL14A1Q05707 1796 aaKnown RBP20.17■□□□□ 0.82
CTSD-211ENST00000637387 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
CTSD-211ENST00000637387 CCDC27Q2M243 656 aa20.17■□□□□ 0.82
CTSD-211ENST00000637387 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
CTSD-211ENST00000637387 EYA1Q99502 592 aa20.17■□□□□ 0.82
CTSD-211ENST00000637387 MAPK8IP3Q9UPT6 1336 aa20.16■□□□□ 0.82
CTSD-211ENST00000637387 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
CTSD-211ENST00000637387 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
CTSD-211ENST00000637387 SULT6B1Q6IMI4 303 aa20.15■□□□□ 0.82
CTSD-211ENST00000637387 VIRMAQ69YN4 1812 aaKnown RBP20.15■□□□□ 0.82
CTSD-211ENST00000637387 PNNQ9H307 717 aaKnown RBP20.14■□□□□ 0.81
CTSD-211ENST00000637387 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.81
CTSD-211ENST00000637387 BTG4Q9NY30 223 aa20.14■□□□□ 0.81
CTSD-211ENST00000637387 ZC3H6P61129 1189 aaKnown RBP20.13■□□□□ 0.81
CTSD-211ENST00000637387 AXIN2Q9Y2T1 843 aa20.13■□□□□ 0.81
CTSD-211ENST00000637387 KIAA0232Q92628 1395 aa20.13■□□□□ 0.81
CTSD-211ENST00000637387 NEUROD2Q15784 382 aa20.12■□□□□ 0.81
CTSD-211ENST00000637387 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
CTSD-211ENST00000637387 LRRC37A3O60309 1634 aa20.12■□□□□ 0.81
CTSD-211ENST00000637387 ZBTB7CA1YPR0 619 aa20.12■□□□□ 0.81
CTSD-211ENST00000637387 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms