RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
CLN6-219ENST00000637329 PDE3BQ13370 1112 aa20.32■□□□□ 0.84
CLN6-219ENST00000637329 SPATA31A6Q5VVP1 1343 aa20.3■□□□□ 0.84
CLN6-219ENST00000637329 FBLN1P23142 703 aa20.3■□□□□ 0.84
CLN6-219ENST00000637329 IL13P35225 146 aa20.3■□□□□ 0.84
CLN6-219ENST00000637329 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
CLN6-219ENST00000637329 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
CLN6-219ENST00000637329 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
CLN6-219ENST00000637329 XPCQ01831 940 aaPredicted RBP20.28■□□□□ 0.84
CLN6-219ENST00000637329 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
CLN6-219ENST00000637329 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.84
CLN6-219ENST00000637329 PHLPP1O60346 1717 aa20.27■□□□□ 0.84
CLN6-219ENST00000637329 FCHSD2O94868 740 aa20.27■□□□□ 0.84
CLN6-219ENST00000637329 NUTM2GQ5VZR2 741 aa20.27■□□□□ 0.84
CLN6-219ENST00000637329 ZNF521Q96K83 1311 aa20.27■□□□□ 0.83
CLN6-219ENST00000637329 AMPHP49418 695 aa20.26■□□□□ 0.83
CLN6-219ENST00000637329 APAF1O14727 1248 aa20.25■□□□□ 0.83
CLN6-219ENST00000637329 EIF4A2Q14240 407 aaKnown RBP20.25■□□□□ 0.83
CLN6-219ENST00000637329 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
CLN6-219ENST00000637329 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
CLN6-219ENST00000637329 ABCA3Q99758 1704 aa20.24■□□□□ 0.83
CLN6-219ENST00000637329 SOX12O15370 315 aa20.24■□□□□ 0.83
CLN6-219ENST00000637329 HOXC9P31274 260 aa20.24■□□□□ 0.83
CLN6-219ENST00000637329 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
CLN6-219ENST00000637329 GCP02774 474 aa20.23■□□□□ 0.83
CLN6-219ENST00000637329 CCDC27Q2M243 656 aa20.23■□□□□ 0.83
CLN6-219ENST00000637329 HSP90AB2PQ58FF8 381 aa20.22■□□□□ 0.83
CLN6-219ENST00000637329 SRCAPQ6ZRS2 3230 aa20.22■□□□□ 0.83
CLN6-219ENST00000637329 CAMTA1Q9Y6Y1 1673 aa20.22■□□□□ 0.83
CLN6-219ENST00000637329 KDRP35968 1356 aa20.21■□□□□ 0.83
CLN6-219ENST00000637329 NEFMP07197 916 aa20.21■□□□□ 0.83
CLN6-219ENST00000637329 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
CLN6-219ENST00000637329 TCP11L2Q8N4U5 519 aa20.21■□□□□ 0.83
CLN6-219ENST00000637329 DDX17Q92841 729 aaKnown RBP20.21■□□□□ 0.83
CLN6-219ENST00000637329 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
CLN6-219ENST00000637329 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
CLN6-219ENST00000637329 IP6K1Q92551 441 aa20.2■□□□□ 0.82
CLN6-219ENST00000637329 CPDO75976 1380 aa20.2■□□□□ 0.82
CLN6-219ENST00000637329 FAM208AQ9UK61 1670 aaKnown RBP20.19■□□□□ 0.82
CLN6-219ENST00000637329 COL22A1Q8NFW1 1626 aaPredicted RBP20.19■□□□□ 0.82
CLN6-219ENST00000637329 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
CLN6-219ENST00000637329 GOLGA2Q08379 1002 aa20.17■□□□□ 0.82
CLN6-219ENST00000637329 SALL2Q9Y467 1007 aaPredicted RBP20.17■□□□□ 0.82
CLN6-219ENST00000637329 NCAPD2Q15021 1401 aa20.17■□□□□ 0.82
CLN6-219ENST00000637329 LMO7Q8WWI1 1683 aa20.16■□□□□ 0.82
CLN6-219ENST00000637329 COL18A1P39060 1754 aa20.16■□□□□ 0.82
CLN6-219ENST00000637329 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
CLN6-219ENST00000637329 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
CLN6-219ENST00000637329 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
CLN6-219ENST00000637329 HMOX1P09601 288 aa20.14■□□□□ 0.81
CLN6-219ENST00000637329 WDR63Q8IWG1 891 aa20.14■□□□□ 0.81
CLN6-219ENST00000637329 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
CLN6-219ENST00000637329 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
CLN6-219ENST00000637329 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
CLN6-219ENST00000637329 E9PSI1 815 aa20.13■□□□□ 0.81
CLN6-219ENST00000637329 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
CLN6-219ENST00000637329 NFE2L2Q16236 605 aa20.12■□□□□ 0.81
CLN6-219ENST00000637329 SULT6B1Q6IMI4 303 aa20.12■□□□□ 0.81
CLN6-219ENST00000637329 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
CLN6-219ENST00000637329 LMOD3Q0VAK6 560 aa20.11■□□□□ 0.81
CLN6-219ENST00000637329 EYA1Q99502 592 aa20.11■□□□□ 0.81
CLN6-219ENST00000637329 LRP6O75581 1613 aa20.11■□□□□ 0.81
CLN6-219ENST00000637329 IL16Q14005 1332 aa20.1■□□□□ 0.81
CLN6-219ENST00000637329 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
CLN6-219ENST00000637329 TRMT2AQ8IZ69 625 aaKnown RBP20.1■□□□□ 0.81
CLN6-219ENST00000637329 RRP7AQ9Y3A4 280 aaKnown RBP20.1■□□□□ 0.81
CLN6-219ENST00000637329 AFF2P51816 1311 aa20.09■□□□□ 0.81
CLN6-219ENST00000637329 RBM6P78332 1123 aaKnown RBP20.09■□□□□ 0.81
CLN6-219ENST00000637329 AEBP1Q8IUX7 1158 aa20.09■□□□□ 0.81
CLN6-219ENST00000637329 CDCA7LQ96GN5 454 aa20.09■□□□□ 0.81
CLN6-219ENST00000637329 ERBB3P21860 1342 aa20.08■□□□□ 0.81
CLN6-219ENST00000637329 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.81
CLN6-219ENST00000637329 LRRC59Q96AG4 307 aaKnown RBP20.08■□□□□ 0.81
CLN6-219ENST00000637329 QTRT2Q9H974 415 aaKnown RBP20.08■□□□□ 0.81
CLN6-219ENST00000637329 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.8
CLN6-219ENST00000637329 KIAA0232Q92628 1395 aa20.08■□□□□ 0.8
CLN6-219ENST00000637329 RIPK4P57078 832 aa20.07■□□□□ 0.8
CLN6-219ENST00000637329 CALD1Q05682 793 aaKnown RBP20.07■□□□□ 0.8
CLN6-219ENST00000637329 NEUROD2Q15784 382 aa20.07■□□□□ 0.8
CLN6-219ENST00000637329 NGLY1Q96IV0 654 aa20.07■□□□□ 0.8
CLN6-219ENST00000637329 PHACTR3Q96KR7 559 aa20.07■□□□□ 0.8
CLN6-219ENST00000637329 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
CLN6-219ENST00000637329 RGPD5Q99666 1765 aa20.06■□□□□ 0.8
CLN6-219ENST00000637329 ZBTB7CA1YPR0 619 aa20.06■□□□□ 0.8
CLN6-219ENST00000637329 ZC3H6P61129 1189 aaKnown RBP20.06■□□□□ 0.8
CLN6-219ENST00000637329 ANKRD24Q8TF21 1146 aa20.06■□□□□ 0.8
CLN6-219ENST00000637329 GTF3C3Q9Y5Q9 886 aa20.06■□□□□ 0.8
CLN6-219ENST00000637329 MYH16Q9H6N6 1097 aa20.05■□□□□ 0.8
CLN6-219ENST00000637329 RGPD2P0DJD1 1756 aa20.05■□□□□ 0.8
CLN6-219ENST00000637329 LRRC37A3O60309 1634 aa20.05■□□□□ 0.8
CLN6-219ENST00000637329 NEFLP07196 543 aa20.04■□□□□ 0.8
CLN6-219ENST00000637329 CABLES1Q8TDN4 633 aa20.04■□□□□ 0.8
CLN6-219ENST00000637329 RNF123Q5XPI4 1314 aa20.03■□□□□ 0.8
CLN6-219ENST00000637329 GAS2L2Q8NHY3 880 aa20.03■□□□□ 0.8
CLN6-219ENST00000637329 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
CLN6-219ENST00000637329 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
CLN6-219ENST00000637329 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
CLN6-219ENST00000637329 PLEKHG5O94827 1062 aa20.01■□□□□ 0.79
CLN6-219ENST00000637329 NBPF6Q5VWK0 638 aa20.01■□□□□ 0.79
CLN6-219ENST00000637329 NBPF4Q96M43 638 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms