RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 USP35Q9P2H5 1018 aa28.9■■■□□ 2.22
SF1-221ENST00000633899 SPATA31A1Q5TZJ5 1347 aa28.9■■■□□ 2.22
SF1-221ENST00000633899 LARP1Q6PKG0 1096 aaKnown RBP28.89■■■□□ 2.22
SF1-221ENST00000633899 ONECUT3O60422 494 aaPredicted RBP28.88■■■□□ 2.21
SF1-221ENST00000633899 UPF1Q92900 1129 aaKnown RBP eCLIP28.87■■■□□ 2.21
SF1-221ENST00000633899 ABCC6O95255 1503 aa28.87■■■□□ 2.21
SF1-221ENST00000633899 NSD3Q9BZ95 1437 aa28.86■■■□□ 2.21
SF1-221ENST00000633899 CRB1P82279 1406 aa28.84■■■□□ 2.21
SF1-221ENST00000633899 THSD7AQ9UPZ6 1657 aa28.83■■■□□ 2.21
SF1-221ENST00000633899 CSB-PGBD3P0DP91 1061 aa28.83■■■□□ 2.21
SF1-221ENST00000633899 TOM1L2Q6ZVM7 507 aa28.83■■■□□ 2.21
SF1-221ENST00000633899 GGNBP2Q9H3C7 697 aa28.83■■■□□ 2.21
SF1-221ENST00000633899 AXIN2Q9Y2T1 843 aa28.83■■■□□ 2.21
SF1-221ENST00000633899 FYB1O15117 783 aa28.82■■■□□ 2.2
SF1-221ENST00000633899 KRT27Q7Z3Y8 459 aa28.82■■■□□ 2.2
SF1-221ENST00000633899 TCP11L2Q8N4U5 519 aa28.82■■■□□ 2.2
SF1-221ENST00000633899 WDR17Q8IZU2 1322 aa28.8■■■□□ 2.2
SF1-221ENST00000633899 CARD14Q9BXL6 1004 aa28.8■■■□□ 2.2
SF1-221ENST00000633899 THRAP3Q9Y2W1 955 aaKnown RBP28.8■■■□□ 2.2
SF1-221ENST00000633899 BARGINQ6ZT62 677 aa28.79■■■□□ 2.2
SF1-221ENST00000633899 CGNL1Q0VF96 1302 aa28.77■■■□□ 2.2
SF1-221ENST00000633899 C11orf95C9JLR9 678 aaPredicted RBP28.76■■■□□ 2.19
SF1-221ENST00000633899 WNK3Q9BYP7 1800 aa28.74■■■□□ 2.19
SF1-221ENST00000633899 PANK3Q9H999 370 aa28.74■■■□□ 2.19
SF1-221ENST00000633899 AMPHP49418 695 aa28.73■■■□□ 2.19
SF1-221ENST00000633899 BLMP54132 1417 aaPredicted RBP28.73■■■□□ 2.19
SF1-221ENST00000633899 KIF7Q2M1P5 1343 aa28.72■■■□□ 2.19
SF1-221ENST00000633899 PARP4Q9UKK3 1724 aaKnown RBP28.72■■■□□ 2.19
SF1-221ENST00000633899 ERBB3P21860 1342 aa28.71■■■□□ 2.19
SF1-221ENST00000633899 MAP3K19Q56UN5 1328 aa28.71■■■□□ 2.19
SF1-221ENST00000633899 IP6K1Q92551 441 aa28.71■■■□□ 2.19
SF1-221ENST00000633899 ANKRD26Q9UPS8 1709 aa28.71■■■□□ 2.19
SF1-221ENST00000633899 EP400Q96L91 3159 aa28.7■■■□□ 2.19
SF1-221ENST00000633899 PDE3BQ13370 1112 aa28.7■■■□□ 2.18
SF1-221ENST00000633899 ANKRD24Q8TF21 1146 aa28.7■■■□□ 2.18
SF1-221ENST00000633899 CARD10Q9BWT7 1032 aa28.7■■■□□ 2.18
SF1-221ENST00000633899 FAM208AQ9UK61 1670 aaKnown RBP28.7■■■□□ 2.18
SF1-221ENST00000633899 FBLN1P23142 703 aa28.69■■■□□ 2.18
SF1-221ENST00000633899 CCDC125Q86Z20 511 aa28.69■■■□□ 2.18
SF1-221ENST00000633899 CCDC7Q96M83 1385 aa28.69■■■□□ 2.18
SF1-221ENST00000633899 RRS1Q15050 365 aaKnown RBP28.68■■■□□ 2.18
SF1-221ENST00000633899 NLRP2Q9NX02 1062 aa28.68■■■□□ 2.18
SF1-221ENST00000633899 RTL1A6NKG5 1358 aa28.67■■■□□ 2.18
SF1-221ENST00000633899 HOXC9P31274 260 aa28.67■■■□□ 2.18
SF1-221ENST00000633899 LTV1Q96GA3 475 aaPredicted RBP28.67■■■□□ 2.18
SF1-221ENST00000633899 SF3B2Q13435 895 aaKnown RBP28.66■■■□□ 2.18
SF1-221ENST00000633899 CDCA7Q9BWT1 371 aaPredicted RBP28.66■■■□□ 2.18
SF1-221ENST00000633899 FAM182BQ5T319 152 aa28.65■■■□□ 2.18
SF1-221ENST00000633899 LRRC37A3O60309 1634 aa28.65■■■□□ 2.18
SF1-221ENST00000633899 DDB1Q16531 1140 aa28.63■■■□□ 2.17
SF1-221ENST00000633899 KNSTRNQ9Y448 316 aa28.63■■■□□ 2.17
SF1-221ENST00000633899 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
SF1-221ENST00000633899 RGPD1P0DJD0 1748 aa28.62■■■□□ 2.17
SF1-221ENST00000633899 SMG6Q86US8 1419 aaKnown RBP28.61■■■□□ 2.17
SF1-221ENST00000633899 NSD2O96028 1365 aa28.61■■■□□ 2.17
SF1-221ENST00000633899 FAM196AQ6ZSG2 479 aa28.6■■■□□ 2.17
SF1-221ENST00000633899 FLT4P35916 1363 aa28.6■■■□□ 2.17
SF1-221ENST00000633899 KIF24Q5T7B8 1368 aa28.6■■■□□ 2.17
SF1-221ENST00000633899 PEAK1Q9H792 1746 aa28.59■■■□□ 2.17
SF1-221ENST00000633899 RGPD2P0DJD1 1756 aa28.59■■■□□ 2.17
SF1-221ENST00000633899 PPM1GO15355 546 aaPredicted RBP28.57■■■□□ 2.16
SF1-221ENST00000633899 DISP2A7MBM2 1401 aa28.57■■■□□ 2.16
SF1-221ENST00000633899 TNNT2P45379 298 aaPredicted RBP28.56■■■□□ 2.16
SF1-221ENST00000633899 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
SF1-221ENST00000633899 IL2RBP14784 551 aa28.55■■■□□ 2.16
SF1-221ENST00000633899 EMILIN1Q9Y6C2 1016 aa28.55■■■□□ 2.16
SF1-221ENST00000633899 INSRP06213 1382 aa28.54■■■□□ 2.16
SF1-221ENST00000633899 EXOC5O00471 708 aa28.54■■■□□ 2.16
SF1-221ENST00000633899 OVOS2A0A0G2JMS6 1433 aa28.53■■■□□ 2.16
SF1-221ENST00000633899 BAG6P46379 1132 aa28.52■■■□□ 2.16
SF1-221ENST00000633899 HSP90AB2PQ58FF8 381 aa28.52■■■□□ 2.16
SF1-221ENST00000633899 MORC1Q86VD1 984 aa28.52■■■□□ 2.16
SF1-221ENST00000633899 TNS1Q9HBL0 1735 aaKnown RBP28.52■■■□□ 2.16
SF1-221ENST00000633899 TNS2Q63HR2 1409 aa28.52■■■□□ 2.16
SF1-221ENST00000633899 TRIM37O94972 964 aa28.5■■■□□ 2.15
SF1-221ENST00000633899 DEFB132Q7Z7B7 95 aa28.49■■■□□ 2.15
SF1-221ENST00000633899 POLKQ9UBT6 870 aa28.48■■■□□ 2.15
SF1-221ENST00000633899 SBF2Q86WG5 1849 aa28.47■■■□□ 2.15
SF1-221ENST00000633899 AMER1Q5JTC6 1135 aaPredicted RBP28.45■■■□□ 2.14
SF1-221ENST00000633899 NBPF6Q5VWK0 638 aa28.45■■■□□ 2.14
SF1-221ENST00000633899 MARCH10Q8NA82 808 aaPredicted RBP28.45■■■□□ 2.14
SF1-221ENST00000633899 NBPF4Q96M43 638 aa28.45■■■□□ 2.14
SF1-221ENST00000633899 USHBP1Q8N6Y0 703 aa28.43■■■□□ 2.14
SF1-221ENST00000633899 PER1O15534 1290 aaPredicted RBP28.41■■■□□ 2.14
SF1-221ENST00000633899 APBA3O96018 575 aa28.41■■■□□ 2.14
SF1-221ENST00000633899 CC2D1BQ5T0F9 858 aaKnown RBP28.41■■■□□ 2.14
SF1-221ENST00000633899 RAPGEF4Q8WZA2 1011 aa28.41■■■□□ 2.14
SF1-221ENST00000633899 EN1Q05925 392 aaPredicted RBP28.4■■■□□ 2.14
SF1-221ENST00000633899 KAT6BQ8WYB5 2073 aa28.39■■■□□ 2.14
SF1-221ENST00000633899 MEGF6O75095 1541 aa28.38■■■□□ 2.13
SF1-221ENST00000633899 BCL9O00512 1426 aa28.38■■■□□ 2.13
SF1-221ENST00000633899 TATP17735 454 aaPredicted RBP28.37■■■□□ 2.13
SF1-221ENST00000633899 CNGB1Q14028 1251 aaPredicted RBP28.37■■■□□ 2.13
SF1-221ENST00000633899 ZEB1P37275 1124 aaPredicted RBP28.36■■■□□ 2.13
SF1-221ENST00000633899 DDX54Q8TDD1 881 aaKnown RBP28.36■■■□□ 2.13
SF1-221ENST00000633899 ZCRB1Q8TBF4 217 aaKnown RBP28.35■■■□□ 2.13
SF1-221ENST00000633899 SHANK3Q9BYB0 1731 aa28.34■■■□□ 2.13
SF1-221ENST00000633899 NPC1L1Q9UHC9 1359 aa28.34■■■□□ 2.13
SF1-221ENST00000633899 EIF4A2Q14240 407 aaKnown RBP28.33■■■□□ 2.13
SF1-221ENST00000633899 BCL11BQ9C0K0 894 aaPredicted RBP28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms