RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
PDCD6-214ENST00000628729 SBF2Q86WG5 1849 aa23.61■■□□□ 1.37
PDCD6-214ENST00000628729 CAMKK2Q96RR4 588 aa23.61■■□□□ 1.37
PDCD6-214ENST00000628729 ABCC6O95255 1503 aa23.6■■□□□ 1.37
PDCD6-214ENST00000628729 SOX12O15370 315 aa23.6■■□□□ 1.37
PDCD6-214ENST00000628729 PDE3BQ13370 1112 aa23.6■■□□□ 1.37
PDCD6-214ENST00000628729 LTN1O94822 1766 aa23.6■■□□□ 1.37
PDCD6-214ENST00000628729 WDR17Q8IZU2 1322 aa23.59■■□□□ 1.37
PDCD6-214ENST00000628729 USP31Q70CQ4 1352 aa23.57■■□□□ 1.36
PDCD6-214ENST00000628729 OVOS2A0A0G2JMS6 1433 aa23.57■■□□□ 1.36
PDCD6-214ENST00000628729 OVOS2A0A0J9YW53 1432 aa23.57■■□□□ 1.36
PDCD6-214ENST00000628729 OVOS2Q6IE36 1432 aa23.57■■□□□ 1.36
PDCD6-214ENST00000628729 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
PDCD6-214ENST00000628729 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
PDCD6-214ENST00000628729 RGPD4Q7Z3J3 1758 aa23.55■■□□□ 1.36
PDCD6-214ENST00000628729 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
PDCD6-214ENST00000628729 APBA3O96018 575 aa23.55■■□□□ 1.36
PDCD6-214ENST00000628729 R3HDM1Q15032 1099 aaKnown RBP23.55■■□□□ 1.36
PDCD6-214ENST00000628729 TOM1L2Q6ZVM7 507 aa23.55■■□□□ 1.36
PDCD6-214ENST00000628729 NME9Q86XW9 330 aa23.55■■□□□ 1.36
PDCD6-214ENST00000628729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.55■■□□□ 1.36
PDCD6-214ENST00000628729 KCNH5Q8NCM2 988 aa23.55■■□□□ 1.36
PDCD6-214ENST00000628729 SLC12A5Q9H2X9 1139 aa23.54■■□□□ 1.36
PDCD6-214ENST00000628729 EDC4Q6P2E9 1401 aaKnown RBP23.53■■□□□ 1.36
PDCD6-214ENST00000628729 TESK2Q96S53 571 aa23.53■■□□□ 1.36
PDCD6-214ENST00000628729 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
PDCD6-214ENST00000628729 TMC1Q8TDI8 760 aa23.5■■□□□ 1.35
PDCD6-214ENST00000628729 DDB1Q16531 1140 aa23.49■■□□□ 1.35
PDCD6-214ENST00000628729 PTF1AQ7RTS3 328 aa23.49■■□□□ 1.35
PDCD6-214ENST00000628729 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
PDCD6-214ENST00000628729 MARCH10Q8NA82 808 aaPredicted RBP23.48■■□□□ 1.35
PDCD6-214ENST00000628729 ST20-MTHFSA0A0A6YYL1 179 aa23.47■■□□□ 1.35
PDCD6-214ENST00000628729 BCL9O00512 1426 aa23.47■■□□□ 1.35
PDCD6-214ENST00000628729 TNS2Q63HR2 1409 aa23.47■■□□□ 1.35
PDCD6-214ENST00000628729 ERBB3P21860 1342 aa23.46■■□□□ 1.35
PDCD6-214ENST00000628729 HDGFL2Q7Z4V5 671 aaPredicted RBP23.46■■□□□ 1.35
PDCD6-214ENST00000628729 CSB-PGBD3P0DP91 1061 aa23.45■■□□□ 1.34
PDCD6-214ENST00000628729 PUS7Q96PZ0 661 aaKnown RBP23.45■■□□□ 1.34
PDCD6-214ENST00000628729 CCDC7Q96M83 1385 aa23.44■■□□□ 1.34
PDCD6-214ENST00000628729 NINLQ9Y2I6 1382 aa23.42■■□□□ 1.34
PDCD6-214ENST00000628729 NHSQ6T4R5 1651 aa23.42■■□□□ 1.34
PDCD6-214ENST00000628729 CDCA7Q9BWT1 371 aaPredicted RBP23.42■■□□□ 1.34
PDCD6-214ENST00000628729 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
PDCD6-214ENST00000628729 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
PDCD6-214ENST00000628729 USP47Q96K76 1375 aa23.4■■□□□ 1.34
PDCD6-214ENST00000628729 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
PDCD6-214ENST00000628729 MYOM1P52179 1685 aa23.4■■□□□ 1.34
PDCD6-214ENST00000628729 CASZ1Q86V15 1759 aa23.4■■□□□ 1.34
PDCD6-214ENST00000628729 BCL11BQ9C0K0 894 aaPredicted RBP23.38■■□□□ 1.33
PDCD6-214ENST00000628729 ANO8Q9HCE9 1232 aaPredicted RBP23.38■■□□□ 1.33
PDCD6-214ENST00000628729 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
PDCD6-214ENST00000628729 ANKRD36BQ8N2N9 1353 aa23.37■■□□□ 1.33
PDCD6-214ENST00000628729 PLSCR1O15162 318 aa23.36■■□□□ 1.33
PDCD6-214ENST00000628729 RGPD2P0DJD1 1756 aa23.36■■□□□ 1.33
PDCD6-214ENST00000628729 PROM2Q8N271 834 aa23.35■■□□□ 1.33
PDCD6-214ENST00000628729 NLRP2Q9NX02 1062 aa23.35■■□□□ 1.33
PDCD6-214ENST00000628729 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.33
PDCD6-214ENST00000628729 KIF20BQ96Q89 1820 aa23.33■■□□□ 1.33
PDCD6-214ENST00000628729 EXOC5O00471 708 aa23.33■■□□□ 1.33
PDCD6-214ENST00000628729 FBLN1P23142 703 aa23.33■■□□□ 1.33
PDCD6-214ENST00000628729 BTAF1O14981 1849 aa23.33■■□□□ 1.32
PDCD6-214ENST00000628729 KCNQ2O43526 872 aa23.32■■□□□ 1.32
PDCD6-214ENST00000628729 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
PDCD6-214ENST00000628729 MAP3K19Q56UN5 1328 aa23.32■■□□□ 1.32
PDCD6-214ENST00000628729 PAPPAQ13219 1627 aa23.31■■□□□ 1.32
PDCD6-214ENST00000628729 IP6K1Q92551 441 aa23.31■■□□□ 1.32
PDCD6-214ENST00000628729 IL2RBP14784 551 aa23.3■■□□□ 1.32
PDCD6-214ENST00000628729 COG3Q96JB2 828 aa23.28■■□□□ 1.32
PDCD6-214ENST00000628729 PDGFDQ9GZP0 370 aaPredicted RBP23.28■■□□□ 1.32
PDCD6-214ENST00000628729 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
PDCD6-214ENST00000628729 DOT1LQ8TEK3 1739 aa23.26■■□□□ 1.31
PDCD6-214ENST00000628729 HOXC9P31274 260 aa23.26■■□□□ 1.31
PDCD6-214ENST00000628729 TMF1P82094 1093 aa23.26■■□□□ 1.31
PDCD6-214ENST00000628729 LTV1Q96GA3 475 aaPredicted RBP23.26■■□□□ 1.31
PDCD6-214ENST00000628729 MEGF6O75095 1541 aa23.26■■□□□ 1.31
PDCD6-214ENST00000628729 TXNRD1Q16881 649 aa23.25■■□□□ 1.31
PDCD6-214ENST00000628729 FYB1O15117 783 aa23.24■■□□□ 1.31
PDCD6-214ENST00000628729 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
PDCD6-214ENST00000628729 GGNBP2Q9H3C7 697 aa23.24■■□□□ 1.31
PDCD6-214ENST00000628729 RTL1A6NKG5 1358 aa23.24■■□□□ 1.31
PDCD6-214ENST00000628729 RRS1Q15050 365 aaKnown RBP23.23■■□□□ 1.31
PDCD6-214ENST00000628729 ANKRD26Q9UPS8 1709 aa23.2■■□□□ 1.3
PDCD6-214ENST00000628729 SPON1Q9HCB6 807 aa23.2■■□□□ 1.3
PDCD6-214ENST00000628729 CARD14Q9BXL6 1004 aa23.19■■□□□ 1.3
PDCD6-214ENST00000628729 NSD3Q9BZ95 1437 aa23.18■■□□□ 1.3
PDCD6-214ENST00000628729 AMPHP49418 695 aa23.18■■□□□ 1.3
PDCD6-214ENST00000628729 NSD2O96028 1365 aa23.17■■□□□ 1.3
PDCD6-214ENST00000628729 CLSPNQ9HAW4 1339 aa23.16■■□□□ 1.3
PDCD6-214ENST00000628729 SLC15A2Q16348 729 aa23.16■■□□□ 1.3
PDCD6-214ENST00000628729 LY75O60449 1722 aa23.16■■□□□ 1.3
PDCD6-214ENST00000628729 TUBGCP6Q96RT7 1819 aa23.15■■□□□ 1.3
PDCD6-214ENST00000628729 ZBTB7AO95365 584 aa23.15■■□□□ 1.3
PDCD6-214ENST00000628729 DDX54Q8TDD1 881 aaKnown RBP23.15■■□□□ 1.3
PDCD6-214ENST00000628729 PCGF6Q9BYE7 350 aa23.15■■□□□ 1.3
PDCD6-214ENST00000628729 NBPF6Q5VWK0 638 aa23.14■■□□□ 1.29
PDCD6-214ENST00000628729 USHBP1Q8N6Y0 703 aa23.14■■□□□ 1.29
PDCD6-214ENST00000628729 NBPF4Q96M43 638 aa23.14■■□□□ 1.29
PDCD6-214ENST00000628729 LRRC4BQ9NT99 713 aa23.14■■□□□ 1.29
PDCD6-214ENST00000628729 STK32BQ9NY57 414 aa23.14■■□□□ 1.29
PDCD6-214ENST00000628729 TIMELESSQ9UNS1 1208 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms