RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 USP6P35125 1406 aa12.56□□□□□ -0.4
CHD2-212ENST00000627622 ZBTB7CA1YPR0 619 aa12.56□□□□□ -0.4
CHD2-212ENST00000627622 KCNQ2O43526 872 aa12.56□□□□□ -0.4
CHD2-212ENST00000627622 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
CHD2-212ENST00000627622 AATKQ6ZMQ8 1374 aa12.56□□□□□ -0.4
CHD2-212ENST00000627622 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
CHD2-212ENST00000627622 PLSCR1O15162 318 aa12.55□□□□□ -0.4
CHD2-212ENST00000627622 DDB1Q16531 1140 aa12.55□□□□□ -0.4
CHD2-212ENST00000627622 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
CHD2-212ENST00000627622 YY1P25490 414 aa12.54□□□□□ -0.4
CHD2-212ENST00000627622 TOM1L2Q6ZVM7 507 aa12.54□□□□□ -0.4
CHD2-212ENST00000627622 CASZ1Q86V15 1759 aa12.53□□□□□ -0.4
CHD2-212ENST00000627622 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
CHD2-212ENST00000627622 NINLQ9Y2I6 1382 aa12.52□□□□□ -0.4
CHD2-212ENST00000627622 AXIN2Q9Y2T1 843 aa12.52□□□□□ -0.41
CHD2-212ENST00000627622 WDR17Q8IZU2 1322 aa12.52□□□□□ -0.41
CHD2-212ENST00000627622 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
CHD2-212ENST00000627622 TRPM1Q7Z4N2 1603 aa12.51□□□□□ -0.41
CHD2-212ENST00000627622 EVC2Q86UK5 1308 aa12.5□□□□□ -0.41
CHD2-212ENST00000627622 BCL9O00512 1426 aa12.5□□□□□ -0.41
CHD2-212ENST00000627622 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
CHD2-212ENST00000627622 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
CHD2-212ENST00000627622 ARHGEF25Q86VW2 580 aa12.5□□□□□ -0.41
CHD2-212ENST00000627622 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
CHD2-212ENST00000627622 ZNF692Q9BU19 519 aaPredicted RBP12.5□□□□□ -0.41
CHD2-212ENST00000627622 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
CHD2-212ENST00000627622 PROM2Q8N271 834 aa12.49□□□□□ -0.41
CHD2-212ENST00000627622 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
CHD2-212ENST00000627622 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
CHD2-212ENST00000627622 TTC21BQ7Z4L5 1316 aa12.48□□□□□ -0.41
CHD2-212ENST00000627622 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
CHD2-212ENST00000627622 CSB-PGBD3P0DP91 1061 aa12.47□□□□□ -0.41
CHD2-212ENST00000627622 L3MBTL2Q969R5 705 aa12.47□□□□□ -0.41
CHD2-212ENST00000627622 PDGFDQ9GZP0 370 aaPredicted RBP12.47□□□□□ -0.41
CHD2-212ENST00000627622 TTC21AQ8NDW8 1320 aa12.47□□□□□ -0.41
CHD2-212ENST00000627622 MYOM1P52179 1685 aa12.46□□□□□ -0.41
CHD2-212ENST00000627622 EXOC5O00471 708 aa12.46□□□□□ -0.41
CHD2-212ENST00000627622 SOX12O15370 315 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 TXNRD1Q16881 649 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 NFAT5O94916 1531 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 STK32BQ9NY57 414 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 CCDC7Q96M83 1385 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 ABCC6O95255 1503 aa12.45□□□□□ -0.42
CHD2-212ENST00000627622 LTN1O94822 1766 aa12.44□□□□□ -0.42
CHD2-212ENST00000627622 CHD4Q14839 1912 aa12.44□□□□□ -0.42
CHD2-212ENST00000627622 PTGER2P43116 358 aa12.44□□□□□ -0.42
CHD2-212ENST00000627622 SLC15A2Q16348 729 aa12.44□□□□□ -0.42
CHD2-212ENST00000627622 NHSQ6T4R5 1651 aa12.44□□□□□ -0.42
CHD2-212ENST00000627622 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
CHD2-212ENST00000627622 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
CHD2-212ENST00000627622 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
CHD2-212ENST00000627622 USP54Q70EL1 1684 aa12.43□□□□□ -0.42
CHD2-212ENST00000627622 TNS2Q63HR2 1409 aa12.43□□□□□ -0.42
CHD2-212ENST00000627622 BTAF1O14981 1849 aa12.41□□□□□ -0.42
CHD2-212ENST00000627622 UTRNP46939 3433 aa12.4□□□□□ -0.42
CHD2-212ENST00000627622 SIN3AQ96ST3 1273 aa12.4□□□□□ -0.42
CHD2-212ENST00000627622 SYT17Q9BSW7 474 aa12.4□□□□□ -0.42
CHD2-212ENST00000627622 MTFR1LQ9H019 292 aa12.4□□□□□ -0.42
CHD2-212ENST00000627622 USP31Q70CQ4 1352 aa12.4□□□□□ -0.42
CHD2-212ENST00000627622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.4□□□□□ -0.43
CHD2-212ENST00000627622 FHDC1Q9C0D6 1143 aaPredicted RBP12.4□□□□□ -0.43
CHD2-212ENST00000627622 ERBB3P21860 1342 aa12.39□□□□□ -0.43
CHD2-212ENST00000627622 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
CHD2-212ENST00000627622 NLRP2Q9NX02 1062 aa12.39□□□□□ -0.43
CHD2-212ENST00000627622 PAPPAQ13219 1627 aa12.39□□□□□ -0.43
CHD2-212ENST00000627622 IL2RBP14784 551 aa12.38□□□□□ -0.43
CHD2-212ENST00000627622 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
CHD2-212ENST00000627622 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
CHD2-212ENST00000627622 SBNO2Q9Y2G9 1366 aa12.37□□□□□ -0.43
CHD2-212ENST00000627622 CD163L1Q9NR16 1453 aa12.37□□□□□ -0.43
CHD2-212ENST00000627622 NME9Q86XW9 330 aa12.37□□□□□ -0.43
CHD2-212ENST00000627622 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
CHD2-212ENST00000627622 QSER1Q2KHR3 1735 aa12.36□□□□□ -0.43
CHD2-212ENST00000627622 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
CHD2-212ENST00000627622 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
CHD2-212ENST00000627622 ARXQ96QS3 562 aa12.35□□□□□ -0.43
CHD2-212ENST00000627622 FAM208AQ9UK61 1670 aaKnown RBP12.35□□□□□ -0.43
CHD2-212ENST00000627622 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
CHD2-212ENST00000627622 LRRC4BQ9NT99 713 aa12.34□□□□□ -0.43
CHD2-212ENST00000627622 COL24A1Q17RW2 1714 aa12.34□□□□□ -0.43
CHD2-212ENST00000627622 EDC4Q6P2E9 1401 aaKnown RBP12.33□□□□□ -0.44
CHD2-212ENST00000627622 MAP3K5Q99683 1374 aa12.33□□□□□ -0.44
CHD2-212ENST00000627622 ZNF827Q17R98 1081 aa12.33□□□□□ -0.44
CHD2-212ENST00000627622 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.44
CHD2-212ENST00000627622 TUBGCP6Q96RT7 1819 aa12.33□□□□□ -0.44
CHD2-212ENST00000627622 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
CHD2-212ENST00000627622 TERF2IPQ9NYB0 399 aa12.32□□□□□ -0.44
CHD2-212ENST00000627622 SLC16A10Q8TF71 515 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 IP6K1Q92551 441 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 LY75O60449 1722 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 SLC27A3Q5K4L6 730 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 DDX54Q8TDD1 881 aaKnown RBP12.31□□□□□ -0.44
CHD2-212ENST00000627622 AKT1S1Q96B36 256 aa12.31□□□□□ -0.44
CHD2-212ENST00000627622 PUS7Q96PZ0 661 aaKnown RBP12.3□□□□□ -0.44
CHD2-212ENST00000627622 DOT1LQ8TEK3 1739 aa12.3□□□□□ -0.44
CHD2-212ENST00000627622 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms