RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
CHD2-211ENST00000627460 U2AF1L5P0DN76 240 aaPredicted RBP11.36□□□□□ -0.59
CHD2-211ENST00000627460 HSPA2P54652 639 aa11.36□□□□□ -0.59
CHD2-211ENST00000627460 U2AF1Q01081 240 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD2-211ENST00000627460 PSME1Q06323 249 aa11.36□□□□□ -0.59
CHD2-211ENST00000627460 ESCO1Q5FWF5 840 aa11.36□□□□□ -0.59
CHD2-211ENST00000627460 DCAF8Q5TAQ9 597 aa11.36□□□□□ -0.59
CHD2-211ENST00000627460 POLKQ9UBT6 870 aa11.36□□□□□ -0.59
CHD2-211ENST00000627460 TMEM94Q12767 1356 aa11.36□□□□□ -0.59
CHD2-211ENST00000627460 RGPD8O14715 1765 aaPredicted RBP11.36□□□□□ -0.59
CHD2-211ENST00000627460 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 FCHSD2O94868 740 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 CCDC27Q2M243 656 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 KCNH5Q8NCM2 988 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 COL3A1P02461 1466 aaPredicted RBP11.35□□□□□ -0.59
CHD2-211ENST00000627460 STRCQ7RTU9 1775 aa11.35□□□□□ -0.59
CHD2-211ENST00000627460 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
CHD2-211ENST00000627460 C1orf167Q5SNV9 1468 aa11.34□□□□□ -0.59
CHD2-211ENST00000627460 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
CHD2-211ENST00000627460 HS6ST3Q8IZP7 471 aa11.34□□□□□ -0.59
CHD2-211ENST00000627460 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
CHD2-211ENST00000627460 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
CHD2-211ENST00000627460 U2SURPO15042 1029 aaKnown RBP11.33□□□□□ -0.6
CHD2-211ENST00000627460 NLRP6P59044 892 aa11.33□□□□□ -0.6
CHD2-211ENST00000627460 ABTB2Q8N961 1025 aa11.33□□□□□ -0.6
CHD2-211ENST00000627460 FAM212AQ96EL1 285 aa11.33□□□□□ -0.6
CHD2-211ENST00000627460 NPHP3Q7Z494 1330 aa11.33□□□□□ -0.6
CHD2-211ENST00000627460 FLT4P35916 1363 aa11.32□□□□□ -0.6
CHD2-211ENST00000627460 E9PSI1 815 aa11.32□□□□□ -0.6
CHD2-211ENST00000627460 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
CHD2-211ENST00000627460 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
CHD2-211ENST00000627460 PIK3C2AO00443 1686 aa11.32□□□□□ -0.6
CHD2-211ENST00000627460 MST1RQ04912 1400 aa11.32□□□□□ -0.6
CHD2-211ENST00000627460 APAF1O14727 1248 aa11.31□□□□□ -0.6
CHD2-211ENST00000627460 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
CHD2-211ENST00000627460 CALD1Q05682 793 aaKnown RBP11.31□□□□□ -0.6
CHD2-211ENST00000627460 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
CHD2-211ENST00000627460 WDR63Q8IWG1 891 aa11.31□□□□□ -0.6
CHD2-211ENST00000627460 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
CHD2-211ENST00000627460 ZNF521Q96K83 1311 aa11.31□□□□□ -0.6
CHD2-211ENST00000627460 IQSEC2Q5JU85 1478 aa11.31□□□□□ -0.6
CHD2-211ENST00000627460 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
CHD2-211ENST00000627460 TCP11L2Q8N4U5 519 aa11.3□□□□□ -0.6
CHD2-211ENST00000627460 STRCP1A6NGW2 1772 aa11.29□□□□□ -0.6
CHD2-211ENST00000627460 RIOK3O14730 519 aaKnown RBP11.29□□□□□ -0.6
CHD2-211ENST00000627460 AMPHP49418 695 aa11.29□□□□□ -0.6
CHD2-211ENST00000627460 CCDC146Q8IYE0 955 aa11.29□□□□□ -0.6
CHD2-211ENST00000627460 EMILIN1Q9Y6C2 1016 aa11.29□□□□□ -0.6
CHD2-211ENST00000627460 IL13P35225 146 aa11.28□□□□□ -0.6
CHD2-211ENST00000627460 KRT28Q7Z3Y7 464 aa11.28□□□□□ -0.6
CHD2-211ENST00000627460 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.28□□□□□ -0.6
CHD2-211ENST00000627460 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
CHD2-211ENST00000627460 IL16Q14005 1332 aa11.28□□□□□ -0.6
CHD2-211ENST00000627460 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
CHD2-211ENST00000627460 FOXO3O43524 673 aa11.27□□□□□ -0.61
CHD2-211ENST00000627460 RRS1Q15050 365 aaKnown RBP11.27□□□□□ -0.61
CHD2-211ENST00000627460 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
CHD2-211ENST00000627460 RBM33Q96EV2 1170 aaKnown RBP11.27□□□□□ -0.61
CHD2-211ENST00000627460 PLEKHF1Q96S99 279 aa11.27□□□□□ -0.61
CHD2-211ENST00000627460 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
CHD2-211ENST00000627460 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
CHD2-211ENST00000627460 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.61
CHD2-211ENST00000627460 SUPT16HQ9Y5B9 1047 aaKnown RBP11.27□□□□□ -0.61
CHD2-211ENST00000627460 MAP3K19Q56UN5 1328 aa11.27□□□□□ -0.61
CHD2-211ENST00000627460 PHRF1Q9P1Y6 1649 aaKnown RBP11.27□□□□□ -0.61
CHD2-211ENST00000627460 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
CHD2-211ENST00000627460 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
CHD2-211ENST00000627460 ORAI2Q96SN7 254 aa11.26□□□□□ -0.61
CHD2-211ENST00000627460 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
CHD2-211ENST00000627460 RCAN3Q9UKA8 241 aa11.26□□□□□ -0.61
CHD2-211ENST00000627460 SLIT3O75094 1523 aa11.25□□□□□ -0.61
CHD2-211ENST00000627460 TMPOP42166 694 aaKnown RBP11.25□□□□□ -0.61
CHD2-211ENST00000627460 TRPM3Q9HCF6 1732 aaPredicted RBP11.25□□□□□ -0.61
CHD2-211ENST00000627460 USP19O94966 1318 aa11.25□□□□□ -0.61
CHD2-211ENST00000627460 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
CHD2-211ENST00000627460 ZNF335Q9H4Z2 1342 aaPredicted RBP11.25□□□□□ -0.61
CHD2-211ENST00000627460 ABCC6O95255 1503 aa11.25□□□□□ -0.61
CHD2-211ENST00000627460 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
CHD2-211ENST00000627460 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
CHD2-211ENST00000627460 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
CHD2-211ENST00000627460 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
CHD2-211ENST00000627460 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
CHD2-211ENST00000627460 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
CHD2-211ENST00000627460 IP6K1Q92551 441 aa11.23□□□□□ -0.61
CHD2-211ENST00000627460 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
CHD2-211ENST00000627460 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
CHD2-211ENST00000627460 NFAT5O94916 1531 aa11.23□□□□□ -0.61
CHD2-211ENST00000627460 XIRP1Q702N8 1843 aaKnown RBP11.23□□□□□ -0.61
CHD2-211ENST00000627460 GCP02774 474 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 HOXC9P31274 260 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 KDRP35968 1356 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 RIPK4P57078 832 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 PLEKHG2Q9H7P9 1386 aa11.22□□□□□ -0.61
CHD2-211ENST00000627460 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
CHD2-211ENST00000627460 RGPD1P0DJD0 1748 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms