RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 KCNA6P17658 529 aa9.21□□□□□ -0.94
CTNNA1-244ENST00000627109 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-244ENST00000627109 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
CTNNA1-244ENST00000627109 LMOD2Q6P5Q4 547 aa9.2□□□□□ -0.94
CTNNA1-244ENST00000627109 CDK19Q9BWU1 502 aa9.2□□□□□ -0.94
CTNNA1-244ENST00000627109 PTCH1Q13635 1447 aa9.2□□□□□ -0.94
CTNNA1-244ENST00000627109 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
CTNNA1-244ENST00000627109 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
CTNNA1-244ENST00000627109 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-244ENST00000627109 METP08581 1390 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 SSH2Q76I76 1423 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 FCHSD2O94868 740 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 MVPQ14764 893 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 PANK1Q8TE04 598 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 FRAT1Q92837 279 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 RSPH6AQ9H0K4 717 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 FBXO3Q9UK99 471 aa9.19□□□□□ -0.94
CTNNA1-244ENST00000627109 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 PNNQ9H307 717 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 PCDHB15Q9Y5E8 787 aa9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 OVOS2A0A0J9YW53 1432 aa9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 ALDH1L2Q3SY69 923 aa9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 OVOS2Q6IE36 1432 aa9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 ATF3P18847 181 aa9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 HDGFL2Q7Z4V5 671 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-244ENST00000627109 PPM1GO15355 546 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 NEFMP07197 916 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 TBX22Q9Y458 520 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 ADAMTSL3P82987 1691 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 POLKQ9UBT6 870 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 COG6Q9Y2V7 657 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 RRP7AQ9Y3A4 280 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 PLEKHG1Q9ULL1 1385 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 ZNF853P0CG23 659 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 U2AF1L5P0DN76 240 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 U2AF1Q01081 240 aaKnown RBP eCLIP9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 VSIG10Q8N0Z9 540 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 GGNBP2Q9H3C7 697 aa9.17□□□□□ -0.94
CTNNA1-244ENST00000627109 UBAP1LF5GYI3 381 aa9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 DIAPH1O60610 1272 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 NPHP4O75161 1426 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 WASLO00401 505 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 ZKSCAN2Q63HK3 967 aa9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 CABP1Q9NZU7 370 aa9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
CTNNA1-244ENST00000627109 IL13P35225 146 aa9.15□□□□□ -0.94
CTNNA1-244ENST00000627109 TNNQ9UQP3 1299 aa9.15□□□□□ -0.94
CTNNA1-244ENST00000627109 TUBGCP6Q96RT7 1819 aa9.15□□□□□ -0.94
CTNNA1-244ENST00000627109 KIF24Q5T7B8 1368 aa9.15□□□□□ -0.94
CTNNA1-244ENST00000627109 PIK3C2AO00443 1686 aa9.15□□□□□ -0.95
CTNNA1-244ENST00000627109 PHRF1Q9P1Y6 1649 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 TRIM27P14373 513 aa9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 SMC5Q8IY18 1101 aa9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 DZIP1LQ8IYY4 767 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 ZNF526Q8TF50 670 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 KIF16BQ96L93 1317 aa9.14□□□□□ -0.95
CTNNA1-244ENST00000627109 RGPD8O14715 1765 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 XPCQ01831 940 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 ESCO1Q5FWF5 840 aa9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 ATF7IPQ6VMQ6 1270 aa9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 SSH1Q8WYL5 1049 aa9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 ZBTB40Q9NUA8 1239 aa9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 EXOSC9Q06265 439 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 CEP170BQ9Y4F5 1589 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 LMTK3Q96Q04 1460 aa9.13□□□□□ -0.95
CTNNA1-244ENST00000627109 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 PTPRUQ92729 1446 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 BCL2L13Q9BXK5 485 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 DDX19BQ9UMR2 479 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 ZBTB7CA1YPR0 619 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 SOX12O15370 315 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 NGDNQ8NEJ9 315 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 FAM208AQ9UK61 1670 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 USP6P35125 1406 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 TBC1D32Q96NH3 1257 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 IFT57Q9NWB7 429 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 PDZRN3Q9UPQ7 1066 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
CTNNA1-244ENST00000627109 TSR2Q969E8 191 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 U2SURPO15042 1029 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 RIPK4P57078 832 aa9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 ABCC4O15439 1325 aa9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 PLEKHG3A1L390 1219 aa9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 SEC24BO95487 1268 aa9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 RGS12O14924 1447 aa9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 NCOA3Q9Y6Q9 1424 aa9.11□□□□□ -0.95
CTNNA1-244ENST00000627109 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 ZNF692Q9BU19 519 aaPredicted RBP9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 NWD1Q149M9 1564 aa9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 TMEM94Q12767 1356 aa9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 FOXO3O43524 673 aa9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 CCDC61Q9Y6R9 512 aa9.1□□□□□ -0.95
CTNNA1-244ENST00000627109 CHD2O14647 1828 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms