RNA–Protein interactions for RNA: ENST00000622827.4

CDH23-214, Transcript of cadherin related 23, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDH23, Length 11,122 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-214ENST00000622827 MCM4P33991 863 aa17■□□□□ 0.31
CDH23-214ENST00000622827 NUP62CLQ9H1M0 184 aa17■□□□□ 0.31
CDH23-214ENST00000622827 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
CDH23-214ENST00000622827 BACH2Q9BYV9 841 aa17■□□□□ 0.31
CDH23-214ENST00000622827 SPATA32Q96LK8 384 aa17■□□□□ 0.31
CDH23-214ENST00000622827 PDCL3Q9H2J4 239 aa17■□□□□ 0.31
CDH23-214ENST00000622827 MICALCLQ6ZW33 695 aa17■□□□□ 0.31
CDH23-214ENST00000622827 UPF3BQ9BZI7 483 aaKnown RBP16.99■□□□□ 0.31
CDH23-214ENST00000622827 PTPN14Q15678 1187 aa16.99■□□□□ 0.31
CDH23-214ENST00000622827 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
CDH23-214ENST00000622827 RNF187Q5TA31 235 aaPredicted RBP16.99■□□□□ 0.31
CDH23-214ENST00000622827 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDH23-214ENST00000622827 CASQ1P31415 396 aa16.99■□□□□ 0.31
CDH23-214ENST00000622827 POLR3GO15318 223 aaPredicted RBP16.98■□□□□ 0.31
CDH23-214ENST00000622827 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 SPATA24Q86W54 205 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 JAKMIP3Q5VZ66 844 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 TANGO6Q9C0B7 1094 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 MAP3K11Q16584 847 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 TAF4BQ92750 862 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 LUZP1Q86V48 1076 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 IKQ13123 557 aaPredicted RBP16.98■□□□□ 0.31
CDH23-214ENST00000622827 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
CDH23-214ENST00000622827 TRIM22Q8IYM9 498 aa16.97■□□□□ 0.31
CDH23-214ENST00000622827 TRERF1Q96PN7 1200 aa16.97■□□□□ 0.31
CDH23-214ENST00000622827 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
CDH23-214ENST00000622827 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDH23-214ENST00000622827 PPP4R3BQ5MIZ7 849 aa16.97■□□□□ 0.31
CDH23-214ENST00000622827 FILIP1Q7Z7B0 1213 aa16.96■□□□□ 0.31
CDH23-214ENST00000622827 STK3Q13188 491 aa16.96■□□□□ 0.31
CDH23-214ENST00000622827 RIC3Q7Z5B4 369 aa16.96■□□□□ 0.31
CDH23-214ENST00000622827 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
CDH23-214ENST00000622827 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
CDH23-214ENST00000622827 SMTNL1A8MU46 457 aa16.95■□□□□ 0.3
CDH23-214ENST00000622827 EVA1CP58658 441 aa16.95■□□□□ 0.3
CDH23-214ENST00000622827 KIF5CO60282 957 aa16.95■□□□□ 0.3
CDH23-214ENST00000622827 IMMTQ16891 758 aaKnown RBP16.95■□□□□ 0.3
CDH23-214ENST00000622827 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
CDH23-214ENST00000622827 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
CDH23-214ENST00000622827 TIGD1Q96MW7 591 aa16.95■□□□□ 0.3
CDH23-214ENST00000622827 DNAJC2Q99543 621 aaKnown RBP16.95■□□□□ 0.3
CDH23-214ENST00000622827 HMOX1P09601 288 aa16.95■□□□□ 0.3
CDH23-214ENST00000622827 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 GOLGA4Q13439 2230 aaKnown RBP16.94■□□□□ 0.3
CDH23-214ENST00000622827 WWC2Q6AWC2 1192 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 ZNF397Q8NF99 534 aaPredicted RBP16.94■□□□□ 0.3
CDH23-214ENST00000622827 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDH23-214ENST00000622827 CCDC113Q9H0I3 377 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 ZSCAN12O43309 604 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 IFFO1Q0D2I5 559 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 AK9Q5TCS8 1911 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 CFAP100Q494V2 611 aa16.94■□□□□ 0.3
CDH23-214ENST00000622827 CDKL5O76039 1030 aa16.93■□□□□ 0.3
CDH23-214ENST00000622827 GNAI3P08754 354 aa16.93■□□□□ 0.3
CDH23-214ENST00000622827 GCC1Q96CN9 775 aa16.93■□□□□ 0.3
CDH23-214ENST00000622827 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
CDH23-214ENST00000622827 EIF5P55010 431 aaKnown RBP16.92■□□□□ 0.3
CDH23-214ENST00000622827 CCDC183Q5T5S1 534 aa16.92■□□□□ 0.3
CDH23-214ENST00000622827 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
CDH23-214ENST00000622827 CTR9Q6PD62 1173 aa16.92■□□□□ 0.3
CDH23-214ENST00000622827 DYNC1I1O14576 645 aa16.92■□□□□ 0.3
CDH23-214ENST00000622827 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
CDH23-214ENST00000622827 CCDC175P0C221 793 aa16.92■□□□□ 0.3
CDH23-214ENST00000622827 STAMBPO95630 424 aa16.91■□□□□ 0.3
CDH23-214ENST00000622827 MNAT1P51948 309 aa16.91■□□□□ 0.3
CDH23-214ENST00000622827 SYTL4Q96C24 671 aaPredicted RBP16.91■□□□□ 0.3
CDH23-214ENST00000622827 GTF2A1P52655 376 aaPredicted RBP16.91■□□□□ 0.3
CDH23-214ENST00000622827 AIMP1Q12904 312 aaKnown RBP16.91■□□□□ 0.3
CDH23-214ENST00000622827 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
CDH23-214ENST00000622827 RAI14Q9P0K7 980 aa16.91■□□□□ 0.3
CDH23-214ENST00000622827 GNAI2P04899 355 aa16.91■□□□□ 0.3
CDH23-214ENST00000622827 SSR1P43307 286 aaKnown RBP16.91■□□□□ 0.3
CDH23-214ENST00000622827 SPA17Q15506 151 aa16.9■□□□□ 0.3
CDH23-214ENST00000622827 SMC1AQ14683 1233 aaKnown RBP16.9■□□□□ 0.3
CDH23-214ENST00000622827 CAMK4Q16566 473 aa16.9■□□□□ 0.3
CDH23-214ENST00000622827 POTEB2H3BUK9 544 aa16.9■□□□□ 0.3
CDH23-214ENST00000622827 GOPCQ9HD26 462 aa16.9■□□□□ 0.3
CDH23-214ENST00000622827 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
CDH23-214ENST00000622827 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDH23-214ENST00000622827 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
CDH23-214ENST00000622827 TNNT1P13805 278 aa16.89■□□□□ 0.29
CDH23-214ENST00000622827 MSH5O43196 834 aa16.89■□□□□ 0.29
CDH23-214ENST00000622827 NOB1Q9ULX3 412 aaKnown RBP16.89■□□□□ 0.29
CDH23-214ENST00000622827 DESP17661 470 aa16.89■□□□□ 0.29
CDH23-214ENST00000622827 CCDC69A6NI79 296 aa16.89■□□□□ 0.29
CDH23-214ENST00000622827 ZMYND15Q9H091 742 aa16.88■□□□□ 0.29
CDH23-214ENST00000622827 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
CDH23-214ENST00000622827 GCOM1H8Y6P7 765 aaPredicted RBP16.88■□□□□ 0.29
CDH23-214ENST00000622827 MYZAPP0CAP1 466 aa16.88■□□□□ 0.29
CDH23-214ENST00000622827 NOL7Q9UMY1 257 aaKnown RBP16.87■□□□□ 0.29
CDH23-214ENST00000622827 KIF21BO75037 1637 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
CDH23-214ENST00000622827 ADAMTS8Q9UP79 889 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 LMAN1P49257 510 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 UBE4AQ14139 1066 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 TTC39AQ5SRH9 613 aa16.87■□□□□ 0.29
CDH23-214ENST00000622827 BCCIPQ9P287 314 aaKnown RBP eCLIP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms