RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 RSPH6AQ9H0K4 717 aa15.66■□□□□ 0.1
MSH6-215ENST00000622629 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
MSH6-215ENST00000622629 POLKQ9UBT6 870 aa15.66■□□□□ 0.1
MSH6-215ENST00000622629 LRRIQ1Q96JM4 1722 aa15.66■□□□□ 0.1
MSH6-215ENST00000622629 HSP90B1P14625 803 aaKnown RBP15.65■□□□□ 0.1
MSH6-215ENST00000622629 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
MSH6-215ENST00000622629 ANKLE2Q86XL3 938 aa15.65■□□□□ 0.1
MSH6-215ENST00000622629 RPAP2Q8IXW5 612 aaPredicted RBP15.65■□□□□ 0.1
MSH6-215ENST00000622629 PHACTR3Q96KR7 559 aa15.65■□□□□ 0.1
MSH6-215ENST00000622629 GORABQ5T7V8 394 aa15.64■□□□□ 0.1
MSH6-215ENST00000622629 PRPF40AO75400 957 aaKnown RBP15.64■□□□□ 0.09
MSH6-215ENST00000622629 TSPYL6Q8N831 410 aa15.64■□□□□ 0.09
MSH6-215ENST00000622629 IL1RAPL2Q9NP60 686 aa15.64■□□□□ 0.09
MSH6-215ENST00000622629 CCT4P50991 539 aaKnown RBP15.64■□□□□ 0.09
MSH6-215ENST00000622629 HDAC1Q13547 482 aaPredicted RBP15.64■□□□□ 0.09
MSH6-215ENST00000622629 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
MSH6-215ENST00000622629 IL16Q14005 1332 aa15.64■□□□□ 0.09
MSH6-215ENST00000622629 NEXNQ0ZGT2 675 aa15.63■□□□□ 0.09
MSH6-215ENST00000622629 RNF214Q8ND24 703 aa15.63■□□□□ 0.09
MSH6-215ENST00000622629 NASPP49321 788 aaPredicted RBP15.63■□□□□ 0.09
MSH6-215ENST00000622629 ERC2O15083 957 aa15.63■□□□□ 0.09
MSH6-215ENST00000622629 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
MSH6-215ENST00000622629 RUFY2Q8WXA3 655 aa15.63■□□□□ 0.09
MSH6-215ENST00000622629 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 LRRCC1Q9C099 1032 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 MAP4K4O95819 1239 aaPredicted RBP15.62■□□□□ 0.09
MSH6-215ENST00000622629 ZKSCAN1P17029 563 aaPredicted RBP15.62■□□□□ 0.09
MSH6-215ENST00000622629 PTPRTO14522 1441 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 ATP7AQ04656 1500 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 ATP10AO60312 1499 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 G3BP1Q13283 466 aaKnown RBP eCLIP15.62■□□□□ 0.097e-7■■■■□ 20.1
MSH6-215ENST00000622629 TBC1D9Q6ZT07 1266 aa15.62■□□□□ 0.09
MSH6-215ENST00000622629 PHF14O94880 888 aa15.61■□□□□ 0.09
MSH6-215ENST00000622629 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
MSH6-215ENST00000622629 HSP90AB2PQ58FF8 381 aa15.61■□□□□ 0.09
MSH6-215ENST00000622629 ADCY10Q96PN6 1610 aa15.61■□□□□ 0.09
MSH6-215ENST00000622629 A0A0U1RQG5 324 aaPredicted RBP15.61■□□□□ 0.09
MSH6-215ENST00000622629 VPS37CA5D8V6 355 aaPredicted RBP15.61■□□□□ 0.09
MSH6-215ENST00000622629 INSRP06213 1382 aa15.61■□□□□ 0.09
MSH6-215ENST00000622629 BMP2KLQ5H9B9 411 aa15.6■□□□□ 0.09
MSH6-215ENST00000622629 PROSER2Q86WR7 435 aaPredicted RBP15.6■□□□□ 0.09
MSH6-215ENST00000622629 CLASRPQ8N2M8 674 aaKnown RBP15.6■□□□□ 0.09
MSH6-215ENST00000622629 NUCB1Q02818 461 aa15.6■□□□□ 0.09
MSH6-215ENST00000622629 TAF7LQ5H9L4 462 aa15.6■□□□□ 0.09
MSH6-215ENST00000622629 GRPEL1Q9HAV7 217 aa15.6■□□□□ 0.09
MSH6-215ENST00000622629 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
MSH6-215ENST00000622629 CHAF1AQ13111 956 aaPredicted RBP15.59■□□□□ 0.09
MSH6-215ENST00000622629 PUS7Q96PZ0 661 aaKnown RBP15.59■□□□□ 0.09
MSH6-215ENST00000622629 ZNF521Q96K83 1311 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
MSH6-215ENST00000622629 KRT24Q2M2I5 525 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 HSP90AB4PQ58FF6 505 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 SMC3Q9UQE7 1217 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 TTC5Q8N0Z6 440 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 CIZ1Q9ULV3 898 aaPredicted RBP15.59■□□□□ 0.09
MSH6-215ENST00000622629 RIC3Q7Z5B4 369 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 ATP6V1DQ9Y5K8 247 aa15.59■□□□□ 0.09
MSH6-215ENST00000622629 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.09
MSH6-215ENST00000622629 VAMP4O75379 141 aa15.58■□□□□ 0.09
MSH6-215ENST00000622629 SRCIN1Q9C0H9 1055 aa15.58■□□□□ 0.09
MSH6-215ENST00000622629 TRIM35Q9UPQ4 493 aa15.58■□□□□ 0.09
MSH6-215ENST00000622629 CSPP1Q1MSJ5 1256 aa15.58■□□□□ 0.08
MSH6-215ENST00000622629 USHBP1Q8N6Y0 703 aa15.58■□□□□ 0.08
MSH6-215ENST00000622629 RAPGEF4Q8WZA2 1011 aa15.58■□□□□ 0.08
MSH6-215ENST00000622629 NEO1Q92859 1461 aa15.58■□□□□ 0.08
MSH6-215ENST00000622629 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 ZNF530Q6P9A1 599 aaPredicted RBP15.57■□□□□ 0.08
MSH6-215ENST00000622629 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 CDC42BPAQ5VT25 1732 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 HSPA2P54652 639 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 XPCQ01831 940 aaPredicted RBP15.57■□□□□ 0.08
MSH6-215ENST00000622629 TNPO1Q92973 898 aaKnown RBP15.57■□□□□ 0.08
MSH6-215ENST00000622629 PPP6R1Q9UPN7 881 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 ACEP12821 1306 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 FAM43AQ8N2R8 423 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 AMOTL2Q9Y2J4 779 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 TNRQ92752 1358 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 UGGT1Q9NYU2 1555 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 MYO5CQ9NQX4 1742 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 SMC5Q8IY18 1101 aa15.57■□□□□ 0.08
MSH6-215ENST00000622629 UPF3BQ9BZI7 483 aaKnown RBP15.57■□□□□ 0.08
MSH6-215ENST00000622629 SSFA2P28290 1259 aa15.56■□□□□ 0.08
MSH6-215ENST00000622629 TSHZ3Q63HK5 1081 aa15.56■□□□□ 0.08
MSH6-215ENST00000622629 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
MSH6-215ENST00000622629 MRPL50Q8N5N7 158 aaKnown RBP15.56■□□□□ 0.08
MSH6-215ENST00000622629 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
MSH6-215ENST00000622629 TRMT2AQ8IZ69 625 aaKnown RBP15.56■□□□□ 0.08
MSH6-215ENST00000622629 GNAT3A8MTJ3 354 aa15.56■□□□□ 0.08
MSH6-215ENST00000622629 PKNOX2Q96KN3 472 aa15.56■□□□□ 0.08
MSH6-215ENST00000622629 MEIS3Q99687 375 aa15.56■□□□□ 0.08
MSH6-215ENST00000622629 GNL2Q13823 731 aaKnown RBP15.55■□□□□ 0.08
MSH6-215ENST00000622629 NUTM1Q86Y26 1132 aa15.55■□□□□ 0.08
MSH6-215ENST00000622629 C16orf71Q8IYS4 520 aaPredicted RBP15.55■□□□□ 0.08
MSH6-215ENST00000622629 H3BQV1 296 aa15.54■□□□□ 0.08
MSH6-215ENST00000622629 HTATSF1O43719 755 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms