RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 EN1Q05925 392 aaPredicted RBP28.81■■■□□ 2.2
SMC6-210ENST00000621152 CSB-PGBD3P0DP91 1061 aa28.8■■■□□ 2.2
SMC6-210ENST00000621152 WDR17Q8IZU2 1322 aa28.79■■■□□ 2.2
SMC6-210ENST00000621152 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
SMC6-210ENST00000621152 A0A1W2PP64 1363 aa28.78■■■□□ 2.2
SMC6-210ENST00000621152 TMF1P82094 1093 aa28.78■■■□□ 2.2
SMC6-210ENST00000621152 USP47Q96K76 1375 aa28.77■■■□□ 2.2
SMC6-210ENST00000621152 EDC4Q6P2E9 1401 aaKnown RBP28.77■■■□□ 2.2
SMC6-210ENST00000621152 MON2Q7Z3U7 1717 aa28.76■■■□□ 2.19
SMC6-210ENST00000621152 COL18A1P39060 1754 aa28.75■■■□□ 2.19
SMC6-210ENST00000621152 APBA3O96018 575 aa28.73■■■□□ 2.19
SMC6-210ENST00000621152 DDB1Q16531 1140 aa28.73■■■□□ 2.19
SMC6-210ENST00000621152 CARD10Q9BWT7 1032 aa28.73■■■□□ 2.19
SMC6-210ENST00000621152 NINLQ9Y2I6 1382 aa28.73■■■□□ 2.19
SMC6-210ENST00000621152 NFAT5O94916 1531 aa28.72■■■□□ 2.19
SMC6-210ENST00000621152 EZH2Q15910 746 aaKnown RBP28.71■■■□□ 2.19
SMC6-210ENST00000621152 CDCA7Q9BWT1 371 aaPredicted RBP28.7■■■□□ 2.18
SMC6-210ENST00000621152 CDCA8Q53HL2 280 aa28.68■■■□□ 2.18
SMC6-210ENST00000621152 CCER1Q8TC90 406 aaPredicted RBP28.68■■■□□ 2.18
SMC6-210ENST00000621152 CAMKK2Q96RR4 588 aa28.68■■■□□ 2.18
SMC6-210ENST00000621152 RGPD1P0DJD0 1748 aa28.67■■■□□ 2.18
SMC6-210ENST00000621152 C11orf95C9JLR9 678 aaPredicted RBP28.67■■■□□ 2.18
SMC6-210ENST00000621152 COG3Q96JB2 828 aa28.67■■■□□ 2.18
SMC6-210ENST00000621152 NLRP2Q9NX02 1062 aa28.66■■■□□ 2.18
SMC6-210ENST00000621152 PSDA5PKW4 1024 aaPredicted RBP28.65■■■□□ 2.18
SMC6-210ENST00000621152 RGPD5Q99666 1765 aa28.65■■■□□ 2.18
SMC6-210ENST00000621152 DISP2A7MBM2 1401 aa28.64■■■□□ 2.18
SMC6-210ENST00000621152 EXOC5O00471 708 aa28.64■■■□□ 2.18
SMC6-210ENST00000621152 ANKRD36BQ8N2N9 1353 aa28.63■■■□□ 2.17
SMC6-210ENST00000621152 ANKRD24Q8TF21 1146 aa28.63■■■□□ 2.17
SMC6-210ENST00000621152 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
SMC6-210ENST00000621152 PARP4Q9UKK3 1724 aaKnown RBP28.62■■■□□ 2.17
SMC6-210ENST00000621152 CCDC7Q96M83 1385 aa28.62■■■□□ 2.17
SMC6-210ENST00000621152 OVOS2A0A0J9YW53 1432 aa28.61■■■□□ 2.17
SMC6-210ENST00000621152 OVOS2Q6IE36 1432 aa28.61■■■□□ 2.17
SMC6-210ENST00000621152 FBLN1P23142 703 aa28.61■■■□□ 2.17
SMC6-210ENST00000621152 IP6K1Q92551 441 aa28.61■■■□□ 2.17
SMC6-210ENST00000621152 ERBB3P21860 1342 aa28.61■■■□□ 2.17
SMC6-210ENST00000621152 USP54Q70EL1 1684 aa28.59■■■□□ 2.17
SMC6-210ENST00000621152 FYB1O15117 783 aa28.59■■■□□ 2.17
SMC6-210ENST00000621152 OVOS2A0A0G2JMS6 1433 aa28.59■■■□□ 2.17
SMC6-210ENST00000621152 TNS1Q9HBL0 1735 aaKnown RBP28.58■■■□□ 2.17
SMC6-210ENST00000621152 R3HDM1Q15032 1099 aaKnown RBP28.58■■■□□ 2.17
SMC6-210ENST00000621152 LTV1Q96GA3 475 aaPredicted RBP28.58■■■□□ 2.17
SMC6-210ENST00000621152 ABCC6O95255 1503 aa28.58■■■□□ 2.17
SMC6-210ENST00000621152 GGNBP2Q9H3C7 697 aa28.57■■■□□ 2.16
SMC6-210ENST00000621152 AMPHP49418 695 aa28.56■■■□□ 2.16
SMC6-210ENST00000621152 PARD3Q8TEW0 1356 aa28.55■■■□□ 2.16
SMC6-210ENST00000621152 MAP3K19Q56UN5 1328 aa28.54■■■□□ 2.16
SMC6-210ENST00000621152 IL2RBP14784 551 aa28.54■■■□□ 2.16
SMC6-210ENST00000621152 BCL11BQ9C0K0 894 aaPredicted RBP28.54■■■□□ 2.16
SMC6-210ENST00000621152 PTF1AQ7RTS3 328 aa28.53■■■□□ 2.16
SMC6-210ENST00000621152 LRRC37A3O60309 1634 aa28.52■■■□□ 2.16
SMC6-210ENST00000621152 LTN1O94822 1766 aa28.52■■■□□ 2.16
SMC6-210ENST00000621152 HOXC9P31274 260 aa28.51■■■□□ 2.15
SMC6-210ENST00000621152 NBPF14Q5TI25 921 aa28.51■■■□□ 2.15
SMC6-210ENST00000621152 POLR3GLQ9BT43 218 aa28.51■■■□□ 2.15
SMC6-210ENST00000621152 CARD14Q9BXL6 1004 aa28.51■■■□□ 2.15
SMC6-210ENST00000621152 PLSCR1O15162 318 aa28.49■■■□□ 2.15
SMC6-210ENST00000621152 RRS1Q15050 365 aaKnown RBP28.49■■■□□ 2.15
SMC6-210ENST00000621152 PEAK1Q9H792 1746 aa28.49■■■□□ 2.15
SMC6-210ENST00000621152 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
SMC6-210ENST00000621152 BCL9O00512 1426 aa28.46■■■□□ 2.15
SMC6-210ENST00000621152 HSPA5P11021 654 aaKnown RBP28.45■■■□□ 2.14
SMC6-210ENST00000621152 WNK3Q9BYP7 1800 aa28.45■■■□□ 2.14
SMC6-210ENST00000621152 KCNQ2O43526 872 aa28.43■■■□□ 2.14
SMC6-210ENST00000621152 TNS2Q63HR2 1409 aa28.43■■■□□ 2.14
SMC6-210ENST00000621152 ACSBG1Q96GR2 724 aa28.42■■■□□ 2.14
SMC6-210ENST00000621152 DDX54Q8TDD1 881 aaKnown RBP28.41■■■□□ 2.14
SMC6-210ENST00000621152 PROM2Q8N271 834 aa28.4■■■□□ 2.14
SMC6-210ENST00000621152 SBF2Q86WG5 1849 aa28.4■■■□□ 2.14
SMC6-210ENST00000621152 NSD3Q9BZ95 1437 aa28.39■■■□□ 2.14
SMC6-210ENST00000621152 HSP90AB2PQ58FF8 381 aa28.38■■■□□ 2.13
SMC6-210ENST00000621152 SRCAPQ6ZRS2 3230 aa28.38■■■□□ 2.13
SMC6-210ENST00000621152 NBPF6Q5VWK0 638 aa28.37■■■□□ 2.13
SMC6-210ENST00000621152 NBPF4Q96M43 638 aa28.37■■■□□ 2.13
SMC6-210ENST00000621152 RTL1A6NKG5 1358 aa28.36■■■□□ 2.13
SMC6-210ENST00000621152 TXNRD1Q16881 649 aa28.35■■■□□ 2.13
SMC6-210ENST00000621152 RREB1Q92766 1687 aa28.35■■■□□ 2.13
SMC6-210ENST00000621152 CGNL1Q0VF96 1302 aa28.34■■■□□ 2.13
SMC6-210ENST00000621152 USHBP1Q8N6Y0 703 aa28.33■■■□□ 2.13
SMC6-210ENST00000621152 ZCRB1Q8TBF4 217 aaKnown RBP28.33■■■□□ 2.13
SMC6-210ENST00000621152 PPM1GO15355 546 aaPredicted RBP28.32■■■□□ 2.12
SMC6-210ENST00000621152 EMILIN1Q9Y6C2 1016 aa28.32■■■□□ 2.12
SMC6-210ENST00000621152 NUP188Q5SRE5 1749 aa28.32■■■□□ 2.12
SMC6-210ENST00000621152 INSRP06213 1382 aa28.31■■■□□ 2.12
SMC6-210ENST00000621152 MYOM1P52179 1685 aa28.31■■■□□ 2.12
SMC6-210ENST00000621152 PANK3Q9H999 370 aa28.3■■■□□ 2.12
SMC6-210ENST00000621152 FLT4P35916 1363 aa28.29■■■□□ 2.12
SMC6-210ENST00000621152 ANO8Q9HCE9 1232 aaPredicted RBP28.29■■■□□ 2.12
SMC6-210ENST00000621152 LRP5O75197 1615 aa28.29■■■□□ 2.12
SMC6-210ENST00000621152 SMG6Q86US8 1419 aaKnown RBP28.28■■■□□ 2.12
SMC6-210ENST00000621152 KIF24Q5T7B8 1368 aa28.28■■■□□ 2.12
SMC6-210ENST00000621152 RAPGEF4Q8WZA2 1011 aa28.28■■■□□ 2.12
SMC6-210ENST00000621152 KIF20BQ96Q89 1820 aa28.27■■■□□ 2.12
SMC6-210ENST00000621152 FAM208AQ9UK61 1670 aaKnown RBP28.27■■■□□ 2.12
SMC6-210ENST00000621152 TATP17735 454 aaPredicted RBP28.25■■■□□ 2.11
SMC6-210ENST00000621152 STK32BQ9NY57 414 aa28.25■■■□□ 2.11
SMC6-210ENST00000621152 RGPD2P0DJD1 1756 aa28.24■■■□□ 2.11
SMC6-210ENST00000621152 TNNT2P45379 298 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms