RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 TEX14Q8IWB6 1497 aa10.05□□□□□ -0.8
ALMS1-208ENST00000620466 DHX16O60231 1041 aaKnown RBP10.05□□□□□ -0.8
ALMS1-208ENST00000620466 NLRP6P59044 892 aa10.05□□□□□ -0.8
ALMS1-208ENST00000620466 CHMP4CQ96CF2 233 aa10.05□□□□□ -0.8
ALMS1-208ENST00000620466 LRRCC1Q9C099 1032 aa10.05□□□□□ -0.8
ALMS1-208ENST00000620466 THUMPD2Q9BTF0 503 aaKnown RBP10.05□□□□□ -0.8
ALMS1-208ENST00000620466 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
ALMS1-208ENST00000620466 APPP05067 770 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 ALDH1L2Q3SY69 923 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 SASS6Q6UVJ0 657 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 LETM1O95202 739 aaPredicted RBP10.04□□□□□ -0.8
ALMS1-208ENST00000620466 ABCC11Q96J66 1382 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 PHF23Q9BUL5 403 aaPredicted RBP10.04□□□□□ -0.8
ALMS1-208ENST00000620466 ZNF428Q96B54 188 aa10.04□□□□□ -0.8
ALMS1-208ENST00000620466 ZNF692Q9BU19 519 aaPredicted RBP10.04□□□□□ -0.8
ALMS1-208ENST00000620466 TPM1P09493 284 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 TRIM27P14373 513 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 TNNT3P45378 269 aaPredicted RBP10.03□□□□□ -0.8
ALMS1-208ENST00000620466 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 NFXL1Q6ZNB6 911 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 IFT57Q9NWB7 429 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 PSMA5P28066 241 aa10.03□□□□□ -0.8
ALMS1-208ENST00000620466 FBXO3Q9UK99 471 aa10.02□□□□□ -0.8
ALMS1-208ENST00000620466 RBM33Q96EV2 1170 aaKnown RBP10.02□□□□□ -0.81
ALMS1-208ENST00000620466 FSD1Q9BTV5 496 aa10.02□□□□□ -0.81
ALMS1-208ENST00000620466 NSD2O96028 1365 aa10.02□□□□□ -0.81
ALMS1-208ENST00000620466 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
ALMS1-208ENST00000620466 ERICH2A1L162 156 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 SAMD1Q6SPF0 538 aaPredicted RBP10.01□□□□□ -0.81
ALMS1-208ENST00000620466 CCAR2Q8N163 923 aaKnown RBP10.01□□□□□ -0.81
ALMS1-208ENST00000620466 ABTB2Q8N961 1025 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 CCDC47Q96A33 483 aaKnown RBP10.01□□□□□ -0.81
ALMS1-208ENST00000620466 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 ADGBQ8N7X0 1667 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 SMARCA5O60264 1052 aaPredicted RBP10.01□□□□□ -0.81
ALMS1-208ENST00000620466 CLASRPQ8N2M8 674 aaKnown RBP10.01□□□□□ -0.81
ALMS1-208ENST00000620466 MAGI3Q5TCQ9 1506 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 RPAP2Q8IXW5 612 aaPredicted RBP10.01□□□□□ -0.81
ALMS1-208ENST00000620466 FANCAO15360 1455 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 TBC1D32Q96NH3 1257 aa10.01□□□□□ -0.81
ALMS1-208ENST00000620466 FYB1O15117 783 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 DCTN1Q14203 1278 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 CCDC70Q6NSX1 233 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 COL17A1Q9UMD9 1497 aaPredicted RBP10□□□□□ -0.81
ALMS1-208ENST00000620466 WAPLQ7Z5K2 1190 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 ATF3P18847 181 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 CCDC43Q96MW1 224 aaKnown RBP10□□□□□ -0.81
ALMS1-208ENST00000620466 C14orf93Q9H972 538 aaKnown RBP10□□□□□ -0.81
ALMS1-208ENST00000620466 KDM5BQ9UGL1 1544 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 CPLX1O14810 134 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 FIBPO43427 364 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 HDGFL1Q5TGJ6 251 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 TESK2Q96S53 571 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 ZMYM4Q5VZL5 1548 aa10□□□□□ -0.81
ALMS1-208ENST00000620466 SETQ01105 290 aaPredicted RBP9.99□□□□□ -0.81
ALMS1-208ENST00000620466 MCM10Q7L590 875 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
ALMS1-208ENST00000620466 NEUROD6Q96NK8 337 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 MIS18AQ9NYP9 233 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 RBM10P98175 930 aaKnown RBP9.99□□□□□ -0.81
ALMS1-208ENST00000620466 CCDC73Q6ZRK6 1079 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 TNPO1Q92973 898 aaKnown RBP9.99□□□□□ -0.81
ALMS1-208ENST00000620466 WDR33Q9C0J8 1336 aaKnown RBP9.99□□□□□ -0.81
ALMS1-208ENST00000620466 ERC1Q8IUD2 1116 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 SRCIN1Q9C0H9 1055 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 ADGRL2O95490 1459 aa9.99□□□□□ -0.81
ALMS1-208ENST00000620466 CD109Q6YHK3 1445 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 KDM6BO15054 1643 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 DNAJC2Q99543 621 aaKnown RBP9.98□□□□□ -0.81
ALMS1-208ENST00000620466 HIP1O00291 1037 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 EMILIN1Q9Y6C2 1016 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 PLCH2O75038 1416 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 ESPNB1AK53 854 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 TRDNQ13061 729 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 ZNF771Q7L3S4 317 aaPredicted RBP9.98□□□□□ -0.81
ALMS1-208ENST00000620466 NME9Q86XW9 330 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 HOOK1Q9UJC3 728 aaKnown RBP9.98□□□□□ -0.81
ALMS1-208ENST00000620466 SSFA2P28290 1259 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 PLEKHO1Q53GL0 409 aaPredicted RBP9.98□□□□□ -0.81
ALMS1-208ENST00000620466 RAPGEF4Q8WZA2 1011 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 PCDHB15Q9Y5E8 787 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 CPLX2Q6PUV4 134 aaKnown RBP9.98□□□□□ -0.81
ALMS1-208ENST00000620466 DISP1Q96F81 1524 aa9.98□□□□□ -0.81
ALMS1-208ENST00000620466 CYP46A1Q9Y6A2 500 aa9.97□□□□□ -0.81
ALMS1-208ENST00000620466 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
ALMS1-208ENST00000620466 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
ALMS1-208ENST00000620466 PATL2C9JE40 543 aaKnown RBP9.97□□□□□ -0.81
ALMS1-208ENST00000620466 BCL11BQ9C0K0 894 aaPredicted RBP9.97□□□□□ -0.81
ALMS1-208ENST00000620466 AEBP1Q8IUX7 1158 aa9.97□□□□□ -0.81
ALMS1-208ENST00000620466 IL1RAPL2Q9NP60 686 aa9.97□□□□□ -0.81
ALMS1-208ENST00000620466 A2MP01023 1474 aa9.97□□□□□ -0.81
ALMS1-208ENST00000620466 NUTM1Q86Y26 1132 aa9.96□□□□□ -0.81
ALMS1-208ENST00000620466 ANKRD20A12PQ8NF67 263 aa9.96□□□□□ -0.81
ALMS1-208ENST00000620466 TNNQ9UQP3 1299 aa9.96□□□□□ -0.81
ALMS1-208ENST00000620466 EXOC6BQ9Y2D4 811 aa9.96□□□□□ -0.81
ALMS1-208ENST00000620466 PER1O15534 1290 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms