RNA–Protein interactions for RNA: ENST00000619199.4

ATP13A3-211, Transcript of ATPase 13A3, humanhuman

TSL 2 BASIC

Gene ATP13A3, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-211ENST00000619199 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 PPP4R3AQ6IN85 833 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 PPFIBP1Q86W92 1011 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 PDILTQ8N807 584 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 FERMT1Q9BQL6 677 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 HOMER2Q9NSB8 354 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 HMGB3O15347 200 aaKnown RBP5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 TAF3Q5VWG9 929 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 ZSCAN25Q6NSZ9 544 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 TAF4BQ92750 862 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 CDCA7LQ96GN5 454 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.67□□□□□ -1.57e-7■■■□□ 19.2
ATP13A3-211ENST00000619199 DENND4BO75064 1496 aaPredicted RBP5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 SNAPC4Q5SXM2 1469 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 ST20-MTHFSA0A0A6YYL1 179 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 HSP90AB3PQ58FF7 597 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 RAPGEF4Q8WZA2 1011 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 NACAP1Q9BZK3 213 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 FAM107BQ9H098 131 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 VPS37CA5D8V6 355 aaPredicted RBP5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 PLIN1O60240 522 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 ANAPC15P60006 121 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 TRIM22Q8IYM9 498 aa5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 DDX23Q9BUQ8 820 aaKnown RBP5.67□□□□□ -1.5
ATP13A3-211ENST00000619199 ANKRD1Q15327 319 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 SAMD1Q6SPF0 538 aaPredicted RBP5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 CEP63Q96MT8 703 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 PARD3Q8TEW0 1356 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 CCDC175P0C221 793 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 CCDC146Q8IYE0 955 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 CNTROBQ8N137 903 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 PDCL2Q8N4E4 241 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 FAM13BQ9NYF5 915 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 SENP3-EIF4A1A0A087X0R7 540 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 CDKL5O76039 1030 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 FERP16591 822 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 WASHC4Q2M389 1173 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 MCM4P33991 863 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 GNAI1P63096 354 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 SMC1AQ14683 1233 aaKnown RBP5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 AEBP1Q8IUX7 1158 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 LTV1Q96GA3 475 aaPredicted RBP5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 SSX2IPQ9Y2D8 614 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 UGGT2Q9NYU1 1516 aa5.66□□□□□ -1.5
ATP13A3-211ENST00000619199 FSD2A1L4K1 749 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 KIF2AO00139 706 aaPredicted RBP5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 KIF20AO95235 890 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 XRCC6P12956 609 aaKnown RBP eCLIP5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 KIAA1107Q9UPP5 1409 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 GCOM1H8Y6P7 765 aaPredicted RBP5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 MYZAPP0CAP1 466 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 TMEM87AQ8NBN3 555 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 GIMAP7Q8NHV1 300 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 SREK1Q8WXA9 508 aaKnown RBP5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 WASF1Q92558 559 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 PSMD1Q99460 953 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 ZNF287Q9HBT7 754 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 FOXD4L1Q9NU39 408 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 POLR1AO95602 1720 aaPredicted RBP5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 NUP155O75694 1391 aa5.65□□□□□ -1.5
ATP13A3-211ENST00000619199 SLU7O95391 586 aaKnown RBP5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 KIF6Q6ZMV9 814 aa5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 CCDC150Q8NCX0 1101 aa5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 GNAI3P08754 354 aa5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 PPM1FP49593 454 aaPredicted RBP5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 PDE3AQ14432 1141 aa5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 IMMTQ16891 758 aaKnown RBP5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 FOXD4L5Q5VV16 416 aaPredicted RBP5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 MICALCLQ6ZW33 695 aa5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 VPS36Q86VN1 386 aa5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 FOXD4L4Q8WXT5 416 aaPredicted RBP5.65□□□□□ -1.51
ATP13A3-211ENST00000619199 GCC2Q8IWJ2 1684 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 C6orf163Q5TEZ5 329 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 FERMT2Q96AC1 680 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 EHMT1Q9H9B1 1298 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 TMOD2Q9NZR1 351 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 FGFR1OPO95684 399 aaKnown RBP5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 MAP9Q49MG5 647 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 UHRF1BP1Q6BDS2 1440 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 TSNARE1Q96NA8 513 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 ZNF397Q8NF99 534 aaPredicted RBP5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 ABCA10Q8WWZ4 1543 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 ZMYM3Q14202 1370 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 PER1O15534 1290 aaPredicted RBP5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 STK38Q15208 465 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 RIC3Q7Z5B4 369 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 TAX1BP1Q86VP1 789 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 TAOK3Q9H2K8 898 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 FAM114A2Q9NRY5 505 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 GRIN2BQ13224 1484 aa5.64□□□□□ -1.51
ATP13A3-211ENST00000619199 ARHGEF11O15085 1522 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 CDC45O75419 566 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 TERF1P54274 439 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 MAP2K1Q02750 393 aaPredicted RBP5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 CCDC148Q8NFR7 591 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 TRIM5Q9C035 493 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 CCDC158Q5M9N0 1113 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 CLUAP1Q96AJ1 413 aa5.63□□□□□ -1.51
ATP13A3-211ENST00000619199 PHF23Q9BUL5 403 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms