RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CCDC27Q2M243 656 aa16.59■□□□□ 0.25
TNFAIP3-209ENST00000619035 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
TNFAIP3-209ENST00000619035 AMPHP49418 695 aa16.58■□□□□ 0.25
TNFAIP3-209ENST00000619035 MSH6P52701 1360 aa16.58■□□□□ 0.25
TNFAIP3-209ENST00000619035 PLEKHG5O94827 1062 aa16.58■□□□□ 0.24
TNFAIP3-209ENST00000619035 RIPK4P57078 832 aa16.58■□□□□ 0.24
TNFAIP3-209ENST00000619035 MST1RQ04912 1400 aa16.58■□□□□ 0.24
TNFAIP3-209ENST00000619035 WDR63Q8IWG1 891 aa16.57■□□□□ 0.24
TNFAIP3-209ENST00000619035 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
TNFAIP3-209ENST00000619035 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
TNFAIP3-209ENST00000619035 PHACTR3Q96KR7 559 aa16.56■□□□□ 0.24
TNFAIP3-209ENST00000619035 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
TNFAIP3-209ENST00000619035 SBNO1A3KN83 1393 aa16.56■□□□□ 0.24
TNFAIP3-209ENST00000619035 FLT4P35916 1363 aa16.56■□□□□ 0.24
TNFAIP3-209ENST00000619035 EXOC6Q8TAG9 804 aa16.56■□□□□ 0.24
TNFAIP3-209ENST00000619035 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
TNFAIP3-209ENST00000619035 ZNF335Q9H4Z2 1342 aaPredicted RBP16.54■□□□□ 0.24
TNFAIP3-209ENST00000619035 SULT6B1Q6IMI4 303 aa16.54■□□□□ 0.24
TNFAIP3-209ENST00000619035 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
TNFAIP3-209ENST00000619035 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
TNFAIP3-209ENST00000619035 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
TNFAIP3-209ENST00000619035 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
TNFAIP3-209ENST00000619035 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
TNFAIP3-209ENST00000619035 KCNH5Q8NCM2 988 aa16.52■□□□□ 0.24
TNFAIP3-209ENST00000619035 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.24
TNFAIP3-209ENST00000619035 NFE2L2Q16236 605 aa16.52■□□□□ 0.23
TNFAIP3-209ENST00000619035 DDX17Q92841 729 aaKnown RBP16.51■□□□□ 0.23
TNFAIP3-209ENST00000619035 RTL1A6NKG5 1358 aa16.51■□□□□ 0.23
TNFAIP3-209ENST00000619035 HOXC9P31274 260 aa16.5■□□□□ 0.23
TNFAIP3-209ENST00000619035 TSR2Q969E8 191 aaKnown RBP16.5■□□□□ 0.23
TNFAIP3-209ENST00000619035 RBM19Q9Y4C8 960 aaKnown RBP16.5■□□□□ 0.23
TNFAIP3-209ENST00000619035 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
TNFAIP3-209ENST00000619035 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
TNFAIP3-209ENST00000619035 NPHP3Q7Z494 1330 aa16.49■□□□□ 0.23
TNFAIP3-209ENST00000619035 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
TNFAIP3-209ENST00000619035 RGPD1P0DJD0 1748 aa16.49■□□□□ 0.23
TNFAIP3-209ENST00000619035 BCAR3O75815 825 aa16.48■□□□□ 0.23
TNFAIP3-209ENST00000619035 SLIT3O75094 1523 aa16.48■□□□□ 0.23
TNFAIP3-209ENST00000619035 THUMPD2Q9BTF0 503 aaKnown RBP16.48■□□□□ 0.23
TNFAIP3-209ENST00000619035 FANCIQ9NVI1 1328 aa16.48■□□□□ 0.23
TNFAIP3-209ENST00000619035 NFAT5O94916 1531 aa16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 ARHGEF10O15013 1369 aa16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 ALS2Q96Q42 1657 aa16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 LTN1O94822 1766 aa16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 EYA1Q99502 592 aa16.47■□□□□ 0.23
TNFAIP3-209ENST00000619035 CRBNQ96SW2 442 aa16.46■□□□□ 0.23
TNFAIP3-209ENST00000619035 USP19O94966 1318 aa16.46■□□□□ 0.23
TNFAIP3-209ENST00000619035 IL16Q14005 1332 aa16.46■□□□□ 0.23
TNFAIP3-209ENST00000619035 GCP02774 474 aa16.45■□□□□ 0.22
TNFAIP3-209ENST00000619035 FAM83GA6ND36 823 aa16.44■□□□□ 0.22
TNFAIP3-209ENST00000619035 IGSF1Q8N6C5 1336 aa16.44■□□□□ 0.22
TNFAIP3-209ENST00000619035 EXOSC9Q06265 439 aaKnown RBP16.44■□□□□ 0.22
TNFAIP3-209ENST00000619035 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
TNFAIP3-209ENST00000619035 CANXP27824 592 aaKnown RBP16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 IP6K1Q92551 441 aa16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 KDRP35968 1356 aa16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 SLAIN2Q9P270 581 aa16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
TNFAIP3-209ENST00000619035 RARSP54136 660 aaKnown RBP16.42■□□□□ 0.22
TNFAIP3-209ENST00000619035 CALD1Q05682 793 aaKnown RBP16.42■□□□□ 0.22
TNFAIP3-209ENST00000619035 PXDNQ92626 1479 aa16.42■□□□□ 0.22
TNFAIP3-209ENST00000619035 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
TNFAIP3-209ENST00000619035 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
TNFAIP3-209ENST00000619035 BRINP3Q76B58 766 aa16.41■□□□□ 0.22
TNFAIP3-209ENST00000619035 TNS3Q68CZ2 1445 aa16.41■□□□□ 0.22
TNFAIP3-209ENST00000619035 ARHGEF25Q86VW2 580 aa16.4■□□□□ 0.22
TNFAIP3-209ENST00000619035 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
TNFAIP3-209ENST00000619035 CT47B1P0C2W7 299 aaPredicted RBP16.39■□□□□ 0.21
TNFAIP3-209ENST00000619035 MTHFSDQ2M296 383 aaKnown RBP16.39■□□□□ 0.21
TNFAIP3-209ENST00000619035 MCM10Q7L590 875 aa16.39■□□□□ 0.21
TNFAIP3-209ENST00000619035 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
TNFAIP3-209ENST00000619035 GNAI1P63096 354 aa16.38■□□□□ 0.21
TNFAIP3-209ENST00000619035 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
TNFAIP3-209ENST00000619035 MED1Q15648 1581 aaPredicted RBP16.38■□□□□ 0.21
TNFAIP3-209ENST00000619035 CABLES1Q8TDN4 633 aa16.38■□□□□ 0.21
TNFAIP3-209ENST00000619035 ABCC6O95255 1503 aa16.37■□□□□ 0.21
TNFAIP3-209ENST00000619035 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
TNFAIP3-209ENST00000619035 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
TNFAIP3-209ENST00000619035 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
TNFAIP3-209ENST00000619035 NBPF6Q5VWK0 638 aa16.36■□□□□ 0.21
TNFAIP3-209ENST00000619035 NBPF4Q96M43 638 aa16.36■□□□□ 0.21
TNFAIP3-209ENST00000619035 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
TNFAIP3-209ENST00000619035 GAS2L2Q8NHY3 880 aa16.35■□□□□ 0.21
TNFAIP3-209ENST00000619035 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
TNFAIP3-209ENST00000619035 CFAP44Q96MT7 982 aa16.35■□□□□ 0.21
TNFAIP3-209ENST00000619035 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
TNFAIP3-209ENST00000619035 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 NHSL1Q5SYE7 1610 aa16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 PANK1Q8TE04 598 aa16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
TNFAIP3-209ENST00000619035 CRYBG1Q9Y4K1 1723 aa16.33■□□□□ 0.21
TNFAIP3-209ENST00000619035 SSH1Q8WYL5 1049 aa16.33■□□□□ 0.2
TNFAIP3-209ENST00000619035 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms