RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 ORAI2Q96SN7 254 aa32.89■■■□□ 2.86
VEGFC-202ENST00000618562 NUTM2GQ5VZR2 741 aa32.88■■■□□ 2.85
VEGFC-202ENST00000618562 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.88■■■□□ 2.85
VEGFC-202ENST00000618562 TMEM94Q12767 1356 aa32.88■■■□□ 2.85
VEGFC-202ENST00000618562 HSP90AB2PQ58FF8 381 aa32.87■■■□□ 2.85
VEGFC-202ENST00000618562 RIPK4P57078 832 aa32.86■■■□□ 2.85
VEGFC-202ENST00000618562 RGPD1P0DJD0 1748 aa32.85■■■□□ 2.85
VEGFC-202ENST00000618562 PHACTR3Q96KR7 559 aa32.85■■■□□ 2.85
VEGFC-202ENST00000618562 SBNO1A3KN83 1393 aa32.85■■■□□ 2.85
VEGFC-202ENST00000618562 MS4A1P11836 297 aa32.84■■■□□ 2.85
VEGFC-202ENST00000618562 PSME1Q06323 249 aa32.84■■■□□ 2.85
VEGFC-202ENST00000618562 C1orf167Q5SNV9 1468 aa32.84■■■□□ 2.85
VEGFC-202ENST00000618562 FLT4P35916 1363 aa32.83■■■□□ 2.85
VEGFC-202ENST00000618562 NCOA3Q9Y6Q9 1424 aa32.83■■■□□ 2.85
VEGFC-202ENST00000618562 NEFMP07197 916 aa32.82■■■□□ 2.84
VEGFC-202ENST00000618562 KIF1AQ12756 1690 aa32.81■■■□□ 2.84
VEGFC-202ENST00000618562 ANP32AP39687 249 aaKnown RBP32.8■■■□□ 2.84
VEGFC-202ENST00000618562 C20orf194Q5TEA3 1177 aa32.8■■■□□ 2.84
VEGFC-202ENST00000618562 DCCP43146 1447 aa32.79■■■□□ 2.84
VEGFC-202ENST00000618562 FOXO3O43524 673 aa32.79■■■□□ 2.84
VEGFC-202ENST00000618562 NFE2L2Q16236 605 aa32.79■■■□□ 2.84
VEGFC-202ENST00000618562 MYH16Q9H6N6 1097 aa32.78■■■□□ 2.84
VEGFC-202ENST00000618562 MST1RQ04912 1400 aa32.77■■■□□ 2.84
VEGFC-202ENST00000618562 AMPHP49418 695 aa32.76■■■□□ 2.84
VEGFC-202ENST00000618562 AEBP1Q8IUX7 1158 aa32.76■■■□□ 2.84
VEGFC-202ENST00000618562 DLG5Q8TDM6 1919 aa32.76■■■□□ 2.84
VEGFC-202ENST00000618562 TRPM3Q9HCF6 1732 aaPredicted RBP32.76■■■□□ 2.83
VEGFC-202ENST00000618562 SULT6B1Q6IMI4 303 aa32.75■■■□□ 2.83
VEGFC-202ENST00000618562 IL16Q14005 1332 aa32.75■■■□□ 2.83
VEGFC-202ENST00000618562 KIF24Q5T7B8 1368 aa32.75■■■□□ 2.83
VEGFC-202ENST00000618562 XIRP1Q702N8 1843 aaKnown RBP32.75■■■□□ 2.83
VEGFC-202ENST00000618562 ATF3P18847 181 aa32.74■■■□□ 2.83
VEGFC-202ENST00000618562 XPCQ01831 940 aaPredicted RBP32.74■■■□□ 2.83
VEGFC-202ENST00000618562 NFAT5O94916 1531 aa32.73■■■□□ 2.83
VEGFC-202ENST00000618562 NOP58Q9Y2X3 529 aaKnown RBP32.73■■■□□ 2.83
VEGFC-202ENST00000618562 LTN1O94822 1766 aa32.73■■■□□ 2.83
VEGFC-202ENST00000618562 BCAR3O75815 825 aa32.73■■■□□ 2.83
VEGFC-202ENST00000618562 KDM2BQ8NHM5 1336 aa32.72■■■□□ 2.83
VEGFC-202ENST00000618562 ARHGEF10O15013 1369 aa32.71■■■□□ 2.83
VEGFC-202ENST00000618562 HOXC9P31274 260 aa32.71■■■□□ 2.83
VEGFC-202ENST00000618562 TSR2Q969E8 191 aaKnown RBP32.71■■■□□ 2.83
VEGFC-202ENST00000618562 IPO9Q96P70 1041 aaKnown RBP32.7■■■□□ 2.83
VEGFC-202ENST00000618562 PDE4AP27815 886 aa32.68■■■□□ 2.82
VEGFC-202ENST00000618562 CENPQQ7L2Z9 268 aaPredicted RBP32.68■■■□□ 2.82
VEGFC-202ENST00000618562 KRT28Q7Z3Y7 464 aa32.67■■■□□ 2.82
VEGFC-202ENST00000618562 BACH2Q9BYV9 841 aa32.67■■■□□ 2.82
VEGFC-202ENST00000618562 RTL1A6NKG5 1358 aa32.66■■■□□ 2.82
VEGFC-202ENST00000618562 CADPS2Q86UW7 1296 aa32.66■■■□□ 2.82
VEGFC-202ENST00000618562 RARSP54136 660 aaKnown RBP32.65■■■□□ 2.82
VEGFC-202ENST00000618562 MSH6P52701 1360 aa32.65■■■□□ 2.82
VEGFC-202ENST00000618562 IGSF1Q8N6C5 1336 aa32.64■■■□□ 2.82
VEGFC-202ENST00000618562 KDRP35968 1356 aa32.64■■■□□ 2.82
VEGFC-202ENST00000618562 EYA1Q99502 592 aa32.64■■■□□ 2.82
VEGFC-202ENST00000618562 SLIT3O75094 1523 aa32.64■■■□□ 2.82
VEGFC-202ENST00000618562 KCNH5Q8NCM2 988 aa32.63■■■□□ 2.81
VEGFC-202ENST00000618562 THUMPD2Q9BTF0 503 aaKnown RBP32.63■■■□□ 2.81
VEGFC-202ENST00000618562 PHRF1Q9P1Y6 1649 aaKnown RBP32.62■■■□□ 2.81
VEGFC-202ENST00000618562 ALS2Q96Q42 1657 aa32.62■■■□□ 2.81
VEGFC-202ENST00000618562 ZNF335Q9H4Z2 1342 aaPredicted RBP32.61■■■□□ 2.81
VEGFC-202ENST00000618562 EXOSC9Q06265 439 aaKnown RBP32.61■■■□□ 2.81
VEGFC-202ENST00000618562 LMOD3Q0VAK6 560 aa32.6■■■□□ 2.81
VEGFC-202ENST00000618562 CT47B1P0C2W7 299 aaPredicted RBP32.59■■■□□ 2.81
VEGFC-202ENST00000618562 USP19O94966 1318 aa32.58■■■□□ 2.81
VEGFC-202ENST00000618562 CALD1Q05682 793 aaKnown RBP32.58■■■□□ 2.81
VEGFC-202ENST00000618562 IP6K1Q92551 441 aa32.58■■■□□ 2.81
VEGFC-202ENST00000618562 LMOD2Q6P5Q4 547 aa32.57■■■□□ 2.8
VEGFC-202ENST00000618562 FAM83GA6ND36 823 aa32.57■■■□□ 2.8
VEGFC-202ENST00000618562 PDE3AQ14432 1141 aa32.57■■■□□ 2.8
VEGFC-202ENST00000618562 GCP02774 474 aa32.56■■■□□ 2.8
VEGFC-202ENST00000618562 DDX17Q92841 729 aaKnown RBP32.56■■■□□ 2.8
VEGFC-202ENST00000618562 LTV1Q96GA3 475 aaPredicted RBP32.54■■■□□ 2.8
VEGFC-202ENST00000618562 IFT57Q9NWB7 429 aa32.54■■■□□ 2.8
VEGFC-202ENST00000618562 ZNF853P0CG23 659 aa32.53■■■□□ 2.8
VEGFC-202ENST00000618562 BCL2L13Q9BXK5 485 aa32.53■■■□□ 2.8
VEGFC-202ENST00000618562 LAS1LQ9Y4W2 734 aaKnown RBP32.53■■■□□ 2.8
VEGFC-202ENST00000618562 DCTN1Q14203 1278 aa32.52■■■□□ 2.8
VEGFC-202ENST00000618562 ZBTB47Q9UFB7 747 aaPredicted RBP32.52■■■□□ 2.8
VEGFC-202ENST00000618562 GNAI1P63096 354 aa32.51■■■□□ 2.8
VEGFC-202ENST00000618562 ARHGEF25Q86VW2 580 aa32.5■■■□□ 2.79
VEGFC-202ENST00000618562 NPHP3Q7Z494 1330 aa32.5■■■□□ 2.79
VEGFC-202ENST00000618562 PLEKHG5O94827 1062 aa32.5■■■□□ 2.79
VEGFC-202ENST00000618562 MED1Q15648 1581 aaPredicted RBP32.5■■■□□ 2.79
VEGFC-202ENST00000618562 CANXP27824 592 aaKnown RBP32.49■■■□□ 2.79
VEGFC-202ENST00000618562 MTHFSDQ2M296 383 aaKnown RBP32.49■■■□□ 2.79
VEGFC-202ENST00000618562 FRAT1Q92837 279 aaPredicted RBP32.49■■■□□ 2.79
VEGFC-202ENST00000618562 ZBTB7CA1YPR0 619 aa32.48■■■□□ 2.79
VEGFC-202ENST00000618562 CFAP44Q96MT7 982 aa32.48■■■□□ 2.79
VEGFC-202ENST00000618562 PXDNQ92626 1479 aa32.48■■■□□ 2.79
VEGFC-202ENST00000618562 MBIPQ9NS73 344 aa32.47■■■□□ 2.79
VEGFC-202ENST00000618562 RGPD2P0DJD1 1756 aa32.45■■■□□ 2.79
VEGFC-202ENST00000618562 BRINP3Q76B58 766 aa32.44■■■□□ 2.78
VEGFC-202ENST00000618562 MCM10Q7L590 875 aa32.44■■■□□ 2.78
VEGFC-202ENST00000618562 SKAP1Q86WV1 359 aa32.44■■■□□ 2.78
VEGFC-202ENST00000618562 SSH1Q8WYL5 1049 aa32.44■■■□□ 2.78
VEGFC-202ENST00000618562 TNS3Q68CZ2 1445 aa32.43■■■□□ 2.78
VEGFC-202ENST00000618562 PANK1Q8TE04 598 aa32.43■■■□□ 2.78
VEGFC-202ENST00000618562 NPM2Q86SE8 214 aaKnown RBP32.42■■■□□ 2.78
VEGFC-202ENST00000618562 USHBP1Q8N6Y0 703 aa32.42■■■□□ 2.78
VEGFC-202ENST00000618562 SMC4Q9NTJ3 1288 aa32.42■■■□□ 2.78
VEGFC-202ENST00000618562 NBPF6Q5VWK0 638 aa32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms