RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 KCNH5Q8NCM2 988 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 NBPF4Q96M43 638 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 ARXQ96QS3 562 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 DLC1Q96QB1 1528 aa6.23□□□□□ -1.41
SYCP1-210ENST00000618516 ANKRD36BQ8N2N9 1353 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 COL16A1Q07092 1604 aaPredicted RBP6.22□□□□□ -1.41
SYCP1-210ENST00000618516 U2AF1L5P0DN76 240 aaPredicted RBP6.22□□□□□ -1.41
SYCP1-210ENST00000618516 HOXC9P31274 260 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 U2AF1Q01081 240 aaKnown RBP eCLIP6.22□□□□□ -1.41
SYCP1-210ENST00000618516 DDB1Q16531 1140 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 SULT6B1Q6IMI4 303 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 ZNF428Q96B54 188 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 WWC3Q9ULE0 1092 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 PSDA5PKW4 1024 aaPredicted RBP6.22□□□□□ -1.41
SYCP1-210ENST00000618516 KCNQ2O43526 872 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 FAM9BQ8IZU0 186 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 RAPGEF4Q8WZA2 1011 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 POLKQ9UBT6 870 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 RRP7AQ9Y3A4 280 aaKnown RBP6.22□□□□□ -1.41
SYCP1-210ENST00000618516 POLR3AO14802 1390 aaPredicted RBP6.22□□□□□ -1.41
SYCP1-210ENST00000618516 FMN2Q9NZ56 1722 aa6.22□□□□□ -1.41
SYCP1-210ENST00000618516 MPRIPQ6WCQ1 1025 aa6.21□□□□□ -1.41
SYCP1-210ENST00000618516 TCP11L2Q8N4U5 519 aa6.21□□□□□ -1.41
SYCP1-210ENST00000618516 ZNF330Q9Y3S2 320 aaPredicted RBP6.21□□□□□ -1.41
SYCP1-210ENST00000618516 SF3B2Q13435 895 aaKnown RBP6.21□□□□□ -1.42
SYCP1-210ENST00000618516 SMIM5Q71RC9 77 aa6.21□□□□□ -1.42
SYCP1-210ENST00000618516 KRT27Q7Z3Y8 459 aa6.21□□□□□ -1.42
SYCP1-210ENST00000618516 IQSEC2Q5JU85 1478 aa6.21□□□□□ -1.42
SYCP1-210ENST00000618516 TTC21AQ8NDW8 1320 aa6.21□□□□□ -1.42
SYCP1-210ENST00000618516 EN1Q05925 392 aaPredicted RBP6.21□□□□□ -1.42
SYCP1-210ENST00000618516 KLHL34Q8N239 644 aa6.21□□□□□ -1.42
SYCP1-210ENST00000618516 YTHDC1Q96MU7 727 aaKnown RBP6.21□□□□□ -1.42
SYCP1-210ENST00000618516 SBNO1A3KN83 1393 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 EXOC5O00471 708 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 CCDC184Q52MB2 194 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 FNBP4Q8N3X1 1017 aaPredicted RBP6.2□□□□□ -1.42
SYCP1-210ENST00000618516 CD163L1Q9NR16 1453 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 PCNTO95613 3336 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 EDC4Q6P2E9 1401 aaKnown RBP6.2□□□□□ -1.42
SYCP1-210ENST00000618516 AMER1Q5JTC6 1135 aaPredicted RBP6.2□□□□□ -1.42
SYCP1-210ENST00000618516 EYA1Q99502 592 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 BCL9LQ86UU0 1499 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 ERBB3P21860 1342 aa6.2□□□□□ -1.42
SYCP1-210ENST00000618516 APBA3O96018 575 aa6.19□□□□□ -1.42
SYCP1-210ENST00000618516 EIF4A2Q14240 407 aaKnown RBP6.19□□□□□ -1.42
SYCP1-210ENST00000618516 LAS1LQ9Y4W2 734 aaKnown RBP6.19□□□□□ -1.42
SYCP1-210ENST00000618516 CPSF1Q10570 1443 aaKnown RBP6.19□□□□□ -1.42
SYCP1-210ENST00000618516 DCTN1Q14203 1278 aa6.19□□□□□ -1.42
SYCP1-210ENST00000618516 IP6K1Q92551 441 aa6.19□□□□□ -1.42
SYCP1-210ENST00000618516 KNDC1Q76NI1 1749 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 ANP32CO43423 234 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 PTCD1O75127 700 aaKnown RBP6.18□□□□□ -1.42
SYCP1-210ENST00000618516 VPS72Q15906 364 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 THUMPD2Q9BTF0 503 aaKnown RBP6.18□□□□□ -1.42
SYCP1-210ENST00000618516 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
SYCP1-210ENST00000618516 SPATA31A1Q5TZJ5 1347 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 WDR17Q8IZU2 1322 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 AHDC1Q5TGY3 1603 aaPredicted RBP6.18□□□□□ -1.42
SYCP1-210ENST00000618516 CAMTA1Q9Y6Y1 1673 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 PER1O15534 1290 aaPredicted RBP6.18□□□□□ -1.42
SYCP1-210ENST00000618516 IL2RBP14784 551 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 PRIM1P49642 420 aaKnown RBP6.18□□□□□ -1.42
SYCP1-210ENST00000618516 MRS2Q9HD23 443 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 SPATA31A5Q5VU36 1347 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 SPATA31A7Q8IWB4 1347 aa6.18□□□□□ -1.42
SYCP1-210ENST00000618516 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
SYCP1-210ENST00000618516 DIEXFQ68CQ4 756 aaKnown RBP6.17□□□□□ -1.42
SYCP1-210ENST00000618516 MIS18AQ9NYP9 233 aa6.17□□□□□ -1.42
SYCP1-210ENST00000618516 KIAA1210Q9ULL0 1709 aa6.17□□□□□ -1.42
SYCP1-210ENST00000618516 TATP17735 454 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-210ENST00000618516 PPP2R1AP30153 589 aa6.17□□□□□ -1.42
SYCP1-210ENST00000618516 ZNF530Q6P9A1 599 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-210ENST00000618516 MARCH10Q8NA82 808 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-210ENST00000618516 BCL11BQ9C0K0 894 aaPredicted RBP6.17□□□□□ -1.42
SYCP1-210ENST00000618516 USP19O94966 1318 aa6.17□□□□□ -1.42
SYCP1-210ENST00000618516 RGS12O14924 1447 aa6.17□□□□□ -1.42
SYCP1-210ENST00000618516 PRKAR2BP31323 418 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 RBM42Q9BTD8 480 aaKnown RBP6.16□□□□□ -1.42
SYCP1-210ENST00000618516 SSH2Q76I76 1423 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 PIP4K2AP48426 406 aaPredicted RBP6.16□□□□□ -1.42
SYCP1-210ENST00000618516 ZCRB1Q8TBF4 217 aaKnown RBP6.16□□□□□ -1.42
SYCP1-210ENST00000618516 NECTIN2Q92692 538 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 CFAP53Q96M91 514 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 PHF14O94880 888 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 SLC39A6Q13433 755 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 WDR43Q15061 677 aaKnown RBP eCLIP6.16□□□□□ -1.42
SYCP1-210ENST00000618516 EZH2Q15910 746 aaKnown RBP6.16□□□□□ -1.42
SYCP1-210ENST00000618516 UPF1Q92900 1129 aaKnown RBP eCLIP6.16□□□□□ -1.42
SYCP1-210ENST00000618516 NHSL1Q5SYE7 1610 aa6.16□□□□□ -1.42
SYCP1-210ENST00000618516 SOCS7O14512 581 aa6.15□□□□□ -1.42
SYCP1-210ENST00000618516 PPP4R3CPQ6ZMV5 832 aa6.15□□□□□ -1.42
SYCP1-210ENST00000618516 NGEFQ8N5V2 710 aa6.15□□□□□ -1.42
SYCP1-210ENST00000618516 ADGRB2O60241 1585 aa6.15□□□□□ -1.42
SYCP1-210ENST00000618516 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.43
SYCP1-210ENST00000618516 MCM10Q7L590 875 aa6.15□□□□□ -1.43
SYCP1-210ENST00000618516 MIER1Q8N108 512 aa6.15□□□□□ -1.43
SYCP1-210ENST00000618516 PHACTR3Q96KR7 559 aa6.15□□□□□ -1.43
SYCP1-210ENST00000618516 FLT4P35916 1363 aa6.15□□□□□ -1.43
SYCP1-210ENST00000618516 SMG6Q86US8 1419 aaKnown RBP6.15□□□□□ -1.43
SYCP1-210ENST00000618516 PIK3C2AO00443 1686 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms