RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 ERICH6Q7L0X2 663 aa22.8■■□□□ 1.24
CNOT3-209ENST00000617930 TRPM3Q9HCF6 1732 aaPredicted RBP22.8■■□□□ 1.24
CNOT3-209ENST00000617930 SOX12O15370 315 aa22.79■■□□□ 1.24
CNOT3-209ENST00000617930 FCHSD2O94868 740 aa22.78■■□□□ 1.24
CNOT3-209ENST00000617930 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
CNOT3-209ENST00000617930 PHACTR3Q96KR7 559 aa22.78■■□□□ 1.24
CNOT3-209ENST00000617930 KIF1AQ12756 1690 aa22.77■■□□□ 1.24
CNOT3-209ENST00000617930 PAK3O75914 559 aaPredicted RBP22.77■■□□□ 1.24
CNOT3-209ENST00000617930 HMOX1P09601 288 aa22.77■■□□□ 1.24
CNOT3-209ENST00000617930 PRKAR2BP31323 418 aa22.77■■□□□ 1.24
CNOT3-209ENST00000617930 ATF3P18847 181 aa22.75■■□□□ 1.23
CNOT3-209ENST00000617930 NLRP6P59044 892 aa22.75■■□□□ 1.23
CNOT3-209ENST00000617930 MAPK8IP3Q9UPT6 1336 aa22.75■■□□□ 1.23
CNOT3-209ENST00000617930 RIPK4P57078 832 aa22.75■■□□□ 1.23
CNOT3-209ENST00000617930 TSR2Q969E8 191 aaKnown RBP22.75■■□□□ 1.23
CNOT3-209ENST00000617930 MSH6P52701 1360 aa22.75■■□□□ 1.23
CNOT3-209ENST00000617930 RARSP54136 660 aaKnown RBP22.74■■□□□ 1.23
CNOT3-209ENST00000617930 PSME1Q06323 249 aa22.74■■□□□ 1.23
CNOT3-209ENST00000617930 ABTB2Q8N961 1025 aa22.74■■□□□ 1.23
CNOT3-209ENST00000617930 MAP3K19Q56UN5 1328 aa22.74■■□□□ 1.23
CNOT3-209ENST00000617930 CADPS2Q86UW7 1296 aa22.71■■□□□ 1.23
CNOT3-209ENST00000617930 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
CNOT3-209ENST00000617930 HSP90AB2PQ58FF8 381 aa22.7■■□□□ 1.23
CNOT3-209ENST00000617930 NFAT5O94916 1531 aa22.7■■□□□ 1.22
CNOT3-209ENST00000617930 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.22
CNOT3-209ENST00000617930 ALS2Q96Q42 1657 aa22.69■■□□□ 1.22
CNOT3-209ENST00000617930 KRT28Q7Z3Y7 464 aa22.69■■□□□ 1.22
CNOT3-209ENST00000617930 TNNQ9UQP3 1299 aa22.69■■□□□ 1.22
CNOT3-209ENST00000617930 EIF4A2Q14240 407 aaKnown RBP22.68■■□□□ 1.22
CNOT3-209ENST00000617930 SKAP1Q86WV1 359 aa22.68■■□□□ 1.22
CNOT3-209ENST00000617930 BCL2L13Q9BXK5 485 aa22.68■■□□□ 1.22
CNOT3-209ENST00000617930 PNNQ9H307 717 aaKnown RBP22.68■■□□□ 1.22
CNOT3-209ENST00000617930 RGPD1P0DJD0 1748 aa22.67■■□□□ 1.22
CNOT3-209ENST00000617930 EXOSC9Q06265 439 aaKnown RBP22.66■■□□□ 1.22
CNOT3-209ENST00000617930 PANK1Q8TE04 598 aa22.66■■□□□ 1.22
CNOT3-209ENST00000617930 KDM2BQ8NHM5 1336 aa22.66■■□□□ 1.22
CNOT3-209ENST00000617930 LTN1O94822 1766 aa22.66■■□□□ 1.22
CNOT3-209ENST00000617930 PXDNQ92626 1479 aa22.66■■□□□ 1.22
CNOT3-209ENST00000617930 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
CNOT3-209ENST00000617930 BRINP3Q76B58 766 aa22.65■■□□□ 1.22
CNOT3-209ENST00000617930 AEBP1Q8IUX7 1158 aa22.65■■□□□ 1.22
CNOT3-209ENST00000617930 IL16Q14005 1332 aa22.65■■□□□ 1.22
CNOT3-209ENST00000617930 THUMPD2Q9BTF0 503 aaKnown RBP22.65■■□□□ 1.22
CNOT3-209ENST00000617930 SBNO1A3KN83 1393 aa22.65■■□□□ 1.22
CNOT3-209ENST00000617930 SLIT3O75094 1523 aa22.65■■□□□ 1.22
CNOT3-209ENST00000617930 LTBP4Q8N2S1 1624 aa22.64■■□□□ 1.21
CNOT3-209ENST00000617930 MED1Q15648 1581 aaPredicted RBP22.64■■□□□ 1.21
CNOT3-209ENST00000617930 PDE3AQ14432 1141 aa22.64■■□□□ 1.21
CNOT3-209ENST00000617930 FRAT1Q92837 279 aaPredicted RBP22.64■■□□□ 1.21
CNOT3-209ENST00000617930 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
CNOT3-209ENST00000617930 RLBP1P12271 317 aa22.63■■□□□ 1.21
CNOT3-209ENST00000617930 FLT4P35916 1363 aa22.62■■□□□ 1.21
CNOT3-209ENST00000617930 USP19O94966 1318 aa22.61■■□□□ 1.21
CNOT3-209ENST00000617930 COG6Q9Y2V7 657 aa22.61■■□□□ 1.21
CNOT3-209ENST00000617930 SLAIN2Q9P270 581 aa22.6■■□□□ 1.21
CNOT3-209ENST00000617930 HOXC9P31274 260 aa22.6■■□□□ 1.21
CNOT3-209ENST00000617930 LMOD2Q6P5Q4 547 aa22.59■■□□□ 1.21
CNOT3-209ENST00000617930 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
CNOT3-209ENST00000617930 AMPHP49418 695 aa22.58■■□□□ 1.2
CNOT3-209ENST00000617930 CRYBG1Q9Y4K1 1723 aa22.58■■□□□ 1.2
CNOT3-209ENST00000617930 FAM83GA6ND36 823 aa22.57■■□□□ 1.2
CNOT3-209ENST00000617930 SSH1Q8WYL5 1049 aa22.57■■□□□ 1.2
CNOT3-209ENST00000617930 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
CNOT3-209ENST00000617930 GCP02774 474 aa22.57■■□□□ 1.2
CNOT3-209ENST00000617930 PHRF1Q9P1Y6 1649 aaKnown RBP22.56■■□□□ 1.2
CNOT3-209ENST00000617930 CT47B1P0C2W7 299 aaPredicted RBP22.56■■□□□ 1.2
CNOT3-209ENST00000617930 CANXP27824 592 aaKnown RBP22.56■■□□□ 1.2
CNOT3-209ENST00000617930 TNS3Q68CZ2 1445 aa22.55■■□□□ 1.2
CNOT3-209ENST00000617930 NEFMP07197 916 aa22.55■■□□□ 1.2
CNOT3-209ENST00000617930 ZNF853P0CG23 659 aa22.55■■□□□ 1.2
CNOT3-209ENST00000617930 DCTN1Q14203 1278 aa22.55■■□□□ 1.2
CNOT3-209ENST00000617930 IGHDP01880 384 aa22.54■■□□□ 1.2
CNOT3-209ENST00000617930 CLUAP1Q96AJ1 413 aa22.54■■□□□ 1.2
CNOT3-209ENST00000617930 EYA1Q99502 592 aa22.53■■□□□ 1.2
CNOT3-209ENST00000617930 LAS1LQ9Y4W2 734 aaKnown RBP22.53■■□□□ 1.2
CNOT3-209ENST00000617930 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
CNOT3-209ENST00000617930 DLG5Q8TDM6 1919 aa22.53■■□□□ 1.2
CNOT3-209ENST00000617930 KIF24Q5T7B8 1368 aa22.53■■□□□ 1.2
CNOT3-209ENST00000617930 CENPQQ7L2Z9 268 aaPredicted RBP22.52■■□□□ 1.2
CNOT3-209ENST00000617930 ARHGEF25Q86VW2 580 aa22.52■■□□□ 1.2
CNOT3-209ENST00000617930 CABLES1Q8TDN4 633 aa22.52■■□□□ 1.2
CNOT3-209ENST00000617930 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
CNOT3-209ENST00000617930 RGPD2P0DJD1 1756 aa22.52■■□□□ 1.2
CNOT3-209ENST00000617930 NHSL1Q5SYE7 1610 aa22.52■■□□□ 1.2
CNOT3-209ENST00000617930 IGSF1Q8N6C5 1336 aa22.51■■□□□ 1.19
CNOT3-209ENST00000617930 KCNH5Q8NCM2 988 aa22.51■■□□□ 1.19
CNOT3-209ENST00000617930 IP6K1Q92551 441 aa22.51■■□□□ 1.19
CNOT3-209ENST00000617930 SOS2Q07890 1332 aaPredicted RBP22.51■■□□□ 1.19
CNOT3-209ENST00000617930 TCERG1O14776 1098 aaKnown RBP22.5■■□□□ 1.19
CNOT3-209ENST00000617930 TSPYL6Q8N831 410 aa22.5■■□□□ 1.19
CNOT3-209ENST00000617930 MBIPQ9NS73 344 aa22.5■■□□□ 1.19
CNOT3-209ENST00000617930 SMC4Q9NTJ3 1288 aa22.5■■□□□ 1.19
CNOT3-209ENST00000617930 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
CNOT3-209ENST00000617930 RGPD5Q99666 1765 aa22.5■■□□□ 1.19
CNOT3-209ENST00000617930 ZBTB7CA1YPR0 619 aa22.5■■□□□ 1.19
CNOT3-209ENST00000617930 LTV1Q96GA3 475 aaPredicted RBP22.5■■□□□ 1.19
CNOT3-209ENST00000617930 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
CNOT3-209ENST00000617930 AXIN2Q9Y2T1 843 aa22.49■■□□□ 1.19
CNOT3-209ENST00000617930 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
CNOT3-209ENST00000617930 KDRP35968 1356 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms