RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 U2AF1Q01081 240 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLTCL1-210ENST00000617926 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
CLTCL1-210ENST00000617926 DZIP1LQ8IYY4 767 aaKnown RBP16.43■□□□□ 0.22
CLTCL1-210ENST00000617926 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
CLTCL1-210ENST00000617926 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
CLTCL1-210ENST00000617926 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
CLTCL1-210ENST00000617926 FMN2Q9NZ56 1722 aa16.43■□□□□ 0.22
CLTCL1-210ENST00000617926 BRPF3Q9ULD4 1205 aa16.43■□□□□ 0.22
CLTCL1-210ENST00000617926 HDAC1Q13547 482 aaPredicted RBP16.42■□□□□ 0.22
CLTCL1-210ENST00000617926 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.221e-12■■■□□ 15
CLTCL1-210ENST00000617926 SIRT1Q96EB6 747 aa16.42■□□□□ 0.22
CLTCL1-210ENST00000617926 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
CLTCL1-210ENST00000617926 RGPD8O14715 1765 aaPredicted RBP16.41■□□□□ 0.22
CLTCL1-210ENST00000617926 CABP2Q9NPB3 220 aa16.41■□□□□ 0.22
CLTCL1-210ENST00000617926 PNPLA6Q8IY17 1366 aa16.41■□□□□ 0.22
CLTCL1-210ENST00000617926 TMPOP42166 694 aaKnown RBP16.4■□□□□ 0.22
CLTCL1-210ENST00000617926 TRIM35Q9UPQ4 493 aa16.4■□□□□ 0.22
CLTCL1-210ENST00000617926 C1orf167Q5SNV9 1468 aa16.4■□□□□ 0.22
CLTCL1-210ENST00000617926 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
CLTCL1-210ENST00000617926 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.22
CLTCL1-210ENST00000617926 AHDC1Q5TGY3 1603 aaPredicted RBP16.39■□□□□ 0.22
CLTCL1-210ENST00000617926 BRINP3Q76B58 766 aa16.39■□□□□ 0.21
CLTCL1-210ENST00000617926 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
CLTCL1-210ENST00000617926 DDX19BQ9UMR2 479 aa16.39■□□□□ 0.21
CLTCL1-210ENST00000617926 TRIM27P14373 513 aa16.38■□□□□ 0.21
CLTCL1-210ENST00000617926 TBC1D2Q9BYX2 928 aa16.38■□□□□ 0.21
CLTCL1-210ENST00000617926 PPIP5K1Q6PFW1 1433 aa16.38■□□□□ 0.21
CLTCL1-210ENST00000617926 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 POGKQ9P215 609 aa16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 SMC5Q8IY18 1101 aa16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 SSH1Q8WYL5 1049 aa16.37■□□□□ 0.21
CLTCL1-210ENST00000617926 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
CLTCL1-210ENST00000617926 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
CLTCL1-210ENST00000617926 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
CLTCL1-210ENST00000617926 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
CLTCL1-210ENST00000617926 FYB1O15117 783 aa16.35■□□□□ 0.21
CLTCL1-210ENST00000617926 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
CLTCL1-210ENST00000617926 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
CLTCL1-210ENST00000617926 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 ATP7BP35670 1465 aa16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 SRPK2P78362 688 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
CLTCL1-210ENST00000617926 ALDH1L2Q3SY69 923 aa16.33■□□□□ 0.2
CLTCL1-210ENST00000617926 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
CLTCL1-210ENST00000617926 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
CLTCL1-210ENST00000617926 ITPRIPQ8IWB1 547 aa16.31■□□□□ 0.2
CLTCL1-210ENST00000617926 DIAPH1O60610 1272 aaKnown RBP16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 C22orf23Q9BZE7 217 aa16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 IPO8O15397 1037 aaKnown RBP16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 RIPK4P57078 832 aa16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
CLTCL1-210ENST00000617926 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
CLTCL1-210ENST00000617926 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
CLTCL1-210ENST00000617926 FAM43AQ8N2R8 423 aa16.29■□□□□ 0.2
CLTCL1-210ENST00000617926 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
CLTCL1-210ENST00000617926 MED1Q15648 1581 aaPredicted RBP16.29■□□□□ 0.2
CLTCL1-210ENST00000617926 PRR36Q9H6K5 1346 aa16.28■□□□□ 0.2
CLTCL1-210ENST00000617926 FCHSD2O94868 740 aa16.28■□□□□ 0.2
CLTCL1-210ENST00000617926 L1TD1Q5T7N2 865 aaKnown RBP16.28■□□□□ 0.2
CLTCL1-210ENST00000617926 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
CLTCL1-210ENST00000617926 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
CLTCL1-210ENST00000617926 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
CLTCL1-210ENST00000617926 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.2
CLTCL1-210ENST00000617926 NUCB1Q02818 461 aa16.27■□□□□ 0.2
CLTCL1-210ENST00000617926 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.19
CLTCL1-210ENST00000617926 CHMP5Q9NZZ3 219 aa16.27■□□□□ 0.19
CLTCL1-210ENST00000617926 PXDNQ92626 1479 aa16.27■□□□□ 0.19
CLTCL1-210ENST00000617926 CDK12Q9NYV4 1490 aaPredicted RBP16.27■□□□□ 0.19
CLTCL1-210ENST00000617926 MON2Q7Z3U7 1717 aa16.26■□□□□ 0.19
CLTCL1-210ENST00000617926 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
CLTCL1-210ENST00000617926 MCM4P33991 863 aa16.25■□□□□ 0.19
CLTCL1-210ENST00000617926 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-210ENST00000617926 MFAP1P55081 439 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-210ENST00000617926 ANO8Q9HCE9 1232 aaPredicted RBP16.25■□□□□ 0.19
CLTCL1-210ENST00000617926 FOXO3O43524 673 aa16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 CDK19Q9BWU1 502 aa16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 JCADQ9P266 1359 aa16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 SOS2Q07890 1332 aaPredicted RBP16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 SNX21Q969T3 373 aa16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
CLTCL1-210ENST00000617926 FSD2A1L4K1 749 aa16.23■□□□□ 0.19
CLTCL1-210ENST00000617926 DDIT3P35638 169 aa16.23■□□□□ 0.19
CLTCL1-210ENST00000617926 XPCQ01831 940 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-210ENST00000617926 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
CLTCL1-210ENST00000617926 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
CLTCL1-210ENST00000617926 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
CLTCL1-210ENST00000617926 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
CLTCL1-210ENST00000617926 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
CLTCL1-210ENST00000617926 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
CLTCL1-210ENST00000617926 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms