RNA–Protein interactions for RNA: ENST00000616170.4

SH3GLB1-205, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-205ENST00000616170 CENPHQ9H3R5 247 aa11.05□□□□□ -0.64
SH3GLB1-205ENST00000616170 TNPO1Q92973 898 aaKnown RBP11.05□□□□□ -0.64
SH3GLB1-205ENST00000616170 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 ZMYND15Q9H091 742 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 PDRG1Q9NUG6 133 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 SMARCA5O60264 1052 aaPredicted RBP11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 MAGEC2Q9UBF1 373 aaPredicted RBP11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 PPFIBP1Q86W92 1011 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
SH3GLB1-205ENST00000616170 KIAA0754O94854 1291 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 PSME1Q06323 249 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 TMX1Q9H3N1 280 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 IL1RAPL2Q9NP60 686 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 CGNQ9P2M7 1197 aaKnown RBP11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 XBP1P17861 261 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 IBSPP21815 317 aaPredicted RBP11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 FERMT3Q86UX7 667 aa11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
SH3GLB1-205ENST00000616170 PPP4R3BQ5MIZ7 849 aa11.02□□□□□ -0.64
SH3GLB1-205ENST00000616170 WDR63Q8IWG1 891 aa11.02□□□□□ -0.64
SH3GLB1-205ENST00000616170 PDCL3Q9H2J4 239 aa11.02□□□□□ -0.64
SH3GLB1-205ENST00000616170 ODF2Q5BJF6 829 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 ERBINQ96RT1 1412 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 FANCD2Q9BXW9 1451 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 CASTP20810 708 aaKnown RBP11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 USP25Q9UHP3 1055 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 HIP1O00291 1037 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 DDX54Q8TDD1 881 aaKnown RBP11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 CASKIN1Q8WXD9 1431 aa11.02□□□□□ -0.65
SH3GLB1-205ENST00000616170 POLR3GO15318 223 aaPredicted RBP11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 MAP3K11Q16584 847 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 UPF3BQ9BZI7 483 aaKnown RBP11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 PTPRGP23470 1445 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 EIF3JO75822 258 aaKnown RBP11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 NUTM1Q86Y26 1132 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 FAM177BA6PVY3 158 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 GDPD2Q9HCC8 539 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 ERLIN1O75477 346 aa11.01□□□□□ -0.65
SH3GLB1-205ENST00000616170 C16orf45Q96MC5 204 aaPredicted RBP11□□□□□ -0.65
SH3GLB1-205ENST00000616170 TRMT1Q9NXH9 659 aaKnown RBP11□□□□□ -0.65
SH3GLB1-205ENST00000616170 UBXN4Q92575 508 aa11□□□□□ -0.65
SH3GLB1-205ENST00000616170 GOLGA6L10A6NI86 522 aa11□□□□□ -0.65
SH3GLB1-205ENST00000616170 ANKRD1Q15327 319 aa11□□□□□ -0.65
SH3GLB1-205ENST00000616170 PTPN14Q15678 1187 aa11□□□□□ -0.65
SH3GLB1-205ENST00000616170 DEF6Q9H4E7 631 aa11□□□□□ -0.65
SH3GLB1-205ENST00000616170 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
SH3GLB1-205ENST00000616170 ZFP91Q96JP5 570 aaPredicted RBP10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 SULT6B1Q6IMI4 303 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 BLOC1S2Q6QNY1 142 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 AACSQ86V21 672 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 CEP57L1Q8IYX8 460 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 CBFA2T2O43439 604 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 TMCO3Q6UWJ1 677 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 ZNHIT6Q9NWK9 470 aaKnown RBP10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 EXOC6BQ9Y2D4 811 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 CCT4P50991 539 aaKnown RBP10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 PANK2Q9BZ23 570 aa10.99□□□□□ -0.65
SH3GLB1-205ENST00000616170 CCDC183Q5T5S1 534 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 CDK5RAP3Q96JB5 506 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 KIAA1107Q9UPP5 1409 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 ERC1Q8IUD2 1116 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 HDGFL1Q5TGJ6 251 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 ZNF830Q96NB3 372 aaPredicted RBP10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 TNNT1P13805 278 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 CFAP100Q494V2 611 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 CKAP2LQ8IYA6 745 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 NLRP6P59044 892 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 TAF3Q5VWG9 929 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 TAX1BP1Q86VP1 789 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 TANGO6Q9C0B7 1094 aa10.98□□□□□ -0.65
SH3GLB1-205ENST00000616170 RAPGEF4Q8WZA2 1011 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 TXLNAP40222 546 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 JMYQ8N9B5 988 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 TBC1D2BQ9UPU7 963 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 GAPVD1Q14C86 1478 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 NUP133Q8WUM0 1156 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 SRGAP3O43295 1099 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 IGHDP01880 384 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 MIS18AQ9NYP9 233 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 URI1O94763 535 aaPredicted RBP10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 NLRP2Q9NX02 1062 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 DACH1Q9UI36 760 aa10.97□□□□□ -0.65
SH3GLB1-205ENST00000616170 CFAP45Q9UL16 551 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms