RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 DCAF8Q5TAQ9 597 aa22.33■■□□□ 1.16
SPAST-203ENST00000615843 TMCO3Q6UWJ1 677 aa22.33■■□□□ 1.16
SPAST-203ENST00000615843 PDRG1Q9NUG6 133 aa22.33■■□□□ 1.16
SPAST-203ENST00000615843 KIF2AO00139 706 aaPredicted RBP22.32■■□□□ 1.16
SPAST-203ENST00000615843 PIP4K2AP48426 406 aaPredicted RBP22.32■■□□□ 1.16
SPAST-203ENST00000615843 PTPN14Q15678 1187 aa22.32■■□□□ 1.16
SPAST-203ENST00000615843 CCDC183Q5T5S1 534 aa22.32■■□□□ 1.16
SPAST-203ENST00000615843 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
SPAST-203ENST00000615843 PRM3Q9NNZ6 103 aa22.32■■□□□ 1.16
SPAST-203ENST00000615843 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
SPAST-203ENST00000615843 PLEKHH2Q8IVE3 1493 aa22.32■■□□□ 1.16
SPAST-203ENST00000615843 UPF3BQ9BZI7 483 aaKnown RBP22.32■■□□□ 1.16
SPAST-203ENST00000615843 ZHX1Q9UKY1 873 aaPredicted RBP22.32■■□□□ 1.16
SPAST-203ENST00000615843 USP8P40818 1118 aa22.31■■□□□ 1.16
SPAST-203ENST00000615843 DEF6Q9H4E7 631 aa22.31■■□□□ 1.16
SPAST-203ENST00000615843 CFAP45Q9UL16 551 aa22.31■■□□□ 1.16
SPAST-203ENST00000615843 MAP4K4O95819 1239 aaPredicted RBP22.31■■□□□ 1.16
SPAST-203ENST00000615843 TIAM1Q13009 1591 aa22.31■■□□□ 1.16
SPAST-203ENST00000615843 DYNC1I1O14576 645 aa22.31■■□□□ 1.16
SPAST-203ENST00000615843 NOL10Q9BSC4 688 aaKnown RBP22.31■■□□□ 1.16
SPAST-203ENST00000615843 MYO6Q9UM54 1294 aa22.3■■□□□ 1.16
SPAST-203ENST00000615843 RPAP2Q8IXW5 612 aaPredicted RBP22.3■■□□□ 1.16
SPAST-203ENST00000615843 DACH1Q9UI36 760 aa22.3■■□□□ 1.16
SPAST-203ENST00000615843 BLOC1S2Q6QNY1 142 aa22.3■■□□□ 1.16
SPAST-203ENST00000615843 JAKMIP1Q96N16 626 aaKnown RBP22.3■■□□□ 1.16
SPAST-203ENST00000615843 CGNQ9P2M7 1197 aaKnown RBP22.3■■□□□ 1.16
SPAST-203ENST00000615843 MAGEC2Q9UBF1 373 aaPredicted RBP22.29■■□□□ 1.16
SPAST-203ENST00000615843 ZNF428Q96B54 188 aa22.29■■□□□ 1.16
SPAST-203ENST00000615843 EPS15P42566 896 aa22.29■■□□□ 1.16
SPAST-203ENST00000615843 RARSP54136 660 aaKnown RBP22.29■■□□□ 1.16
SPAST-203ENST00000615843 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
SPAST-203ENST00000615843 USP25Q9UHP3 1055 aa22.29■■□□□ 1.16
SPAST-203ENST00000615843 PDIA4P13667 645 aaKnown RBP22.29■■□□□ 1.16
SPAST-203ENST00000615843 CCDC102AQ96A19 550 aa22.29■■□□□ 1.16
SPAST-203ENST00000615843 ZNHIT6Q9NWK9 470 aaKnown RBP22.29■■□□□ 1.16
SPAST-203ENST00000615843 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
SPAST-203ENST00000615843 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
SPAST-203ENST00000615843 CAMK4Q16566 473 aa22.28■■□□□ 1.16
SPAST-203ENST00000615843 CALCOCO1Q9P1Z2 691 aa22.28■■□□□ 1.16
SPAST-203ENST00000615843 PPP4R3BQ5MIZ7 849 aa22.27■■□□□ 1.16
SPAST-203ENST00000615843 SART3Q15020 963 aaKnown RBP22.27■■□□□ 1.16
SPAST-203ENST00000615843 CT47A1Q5JQC4 288 aaPredicted RBP22.27■■□□□ 1.16
SPAST-203ENST00000615843 KIF18AQ8NI77 898 aa22.27■■□□□ 1.16
SPAST-203ENST00000615843 LRPPRCP42704 1394 aaKnown RBP22.27■■□□□ 1.16
SPAST-203ENST00000615843 XRCC6P12956 609 aaKnown RBP eCLIP22.27■■□□□ 1.16
SPAST-203ENST00000615843 GOLGA6L10A6NI86 522 aa22.26■■□□□ 1.15
SPAST-203ENST00000615843 VPS37DQ86XT2 251 aa22.26■■□□□ 1.15
SPAST-203ENST00000615843 TBC1D32Q96NH3 1257 aa22.26■■□□□ 1.15
SPAST-203ENST00000615843 RAD21O60216 631 aa22.25■■□□□ 1.15
SPAST-203ENST00000615843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.15
SPAST-203ENST00000615843 EHBP1L1Q8N3D4 1523 aa22.25■■□□□ 1.15
SPAST-203ENST00000615843 SMTNL1A8MU46 457 aa22.24■■□□□ 1.15
SPAST-203ENST00000615843 TNNT1P13805 278 aa22.24■■□□□ 1.15
SPAST-203ENST00000615843 KLHL40Q2TBA0 621 aa22.24■■□□□ 1.15
SPAST-203ENST00000615843 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
SPAST-203ENST00000615843 SFPQP23246 707 aaKnown RBP eCLIP22.24■■□□□ 1.15
SPAST-203ENST00000615843 NAIPQ13075 1403 aa22.24■■□□□ 1.15
SPAST-203ENST00000615843 TXLNAP40222 546 aa22.23■■□□□ 1.15
SPAST-203ENST00000615843 HSP90AB2PQ58FF8 381 aa22.23■■□□□ 1.15
SPAST-203ENST00000615843 BAG4O95429 457 aaKnown RBP22.23■■□□□ 1.15
SPAST-203ENST00000615843 FAM193AP78312 1265 aa22.23■■□□□ 1.15
SPAST-203ENST00000615843 CCDC181Q5TID7 509 aa22.23■■□□□ 1.15
SPAST-203ENST00000615843 SYNJ1O43426 1573 aa22.23■■□□□ 1.15
SPAST-203ENST00000615843 FERMT3Q86UX7 667 aa22.22■■□□□ 1.15
SPAST-203ENST00000615843 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
SPAST-203ENST00000615843 PRIMPOLQ96LW4 560 aa22.22■■□□□ 1.15
SPAST-203ENST00000615843 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
SPAST-203ENST00000615843 CASTP20810 708 aaKnown RBP22.22■■□□□ 1.15
SPAST-203ENST00000615843 HDGFL1Q5TGJ6 251 aa22.21■■□□□ 1.15
SPAST-203ENST00000615843 C16orf45Q96MC5 204 aaPredicted RBP22.21■■□□□ 1.15
SPAST-203ENST00000615843 DUSP27Q5VZP5 1158 aa22.21■■□□□ 1.15
SPAST-203ENST00000615843 IL1RAPL2Q9NP60 686 aa22.21■■□□□ 1.15
SPAST-203ENST00000615843 NCOA1Q15788 1441 aa22.21■■□□□ 1.15
SPAST-203ENST00000615843 PLCD4Q9BRC7 762 aa22.21■■□□□ 1.15
SPAST-203ENST00000615843 PANK2Q9BZ23 570 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 CLIP2Q9UDT6 1046 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 TCEAL9Q9UHQ7 104 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
SPAST-203ENST00000615843 CCDC83Q8IWF9 413 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 TBC1D2BQ9UPU7 963 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 CFAP100Q494V2 611 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 GBP3Q9H0R5 595 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 PLEKHH1Q9ULM0 1364 aa22.2■■□□□ 1.14
SPAST-203ENST00000615843 SPDYE4A6NLX3 237 aa22.19■■□□□ 1.14
SPAST-203ENST00000615843 ADCY5O95622 1261 aa22.19■■□□□ 1.14
SPAST-203ENST00000615843 SULT6B1Q6IMI4 303 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 IQCEQ6IPM2 695 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 SCAND2PQ9GZW5 306 aaPredicted RBP22.18■■□□□ 1.14
SPAST-203ENST00000615843 GOLGA6L7A0A1B0GV03 622 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 ERLIN2O94905 339 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 ARHGAP29Q52LW3 1261 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 TRERF1Q96PN7 1200 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 ZSCAN12O43309 604 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 C9orf84Q5VXU9 1444 aa22.18■■□□□ 1.14
SPAST-203ENST00000615843 EFCAB5A4FU69 1503 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 FYB1O15117 783 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 URI1O94763 535 aaPredicted RBP22.17■■□□□ 1.14
SPAST-203ENST00000615843 IGHDP01880 384 aa22.17■■□□□ 1.14
SPAST-203ENST00000615843 KRT32Q14532 448 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms