RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 UVSSAQ2YD98 709 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 SLC52A1Q9NWF4 448 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 PLCD4Q9BRC7 762 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 SDF4Q9BRK5 362 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 PAXBP1Q9Y5B6 917 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 PRXQ9BXM0 1461 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 MAP3K1Q13233 1512 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 MCM3P25205 808 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 CCDC30Q5VVM6 783 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 LRRCC1Q9C099 1032 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 TSPYL4Q9UJ04 414 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 PANK1Q8TE04 598 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 BCL11BQ9C0K0 894 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-211ENST00000613795 BRMS1Q9HCU9 246 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 ANKRD30BQ9BXX2 1392 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 POTEB2H3BUK9 544 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 XBP1P17861 261 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 GTF2F1P35269 517 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLCN3-211ENST00000613795 SAFBQ15424 915 aaKnown RBP eCLIP8.13□□□□□ -1.11
CLCN3-211ENST00000613795 PLEKHO1Q53GL0 409 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-211ENST00000613795 CCDC102AQ96A19 550 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 FEZ1Q99689 392 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 TNMDQ9H2S6 317 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 FILIP1LQ4L180 1135 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 CPLX1O14810 134 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-211ENST00000613795 RRP7AQ9Y3A4 280 aaKnown RBP8.13□□□□□ -1.11
CLCN3-211ENST00000613795 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 NEFHP12036 1026 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 PIP4K2AP48426 406 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-211ENST00000613795 MAP9Q49MG5 647 aa8.13□□□□□ -1.11
CLCN3-211ENST00000613795 CC2D2AQ9P2K1 1620 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 XRCC6P12956 609 aaKnown RBP eCLIP8.12□□□□□ -1.112e-6■■■■■ 34.5
CLCN3-211ENST00000613795 VPS37DQ86XT2 251 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 ZNF428Q96B54 188 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 ZNF396Q96N95 335 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-211ENST00000613795 CNTROBQ8N137 903 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 NEK4P51957 841 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 DNAAF4Q8WXU2 420 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 ATAD2Q6PL18 1390 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 KIAA0586Q9BVV6 1533 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 SYCE3A1L190 88 aa8.12□□□□□ -1.11
CLCN3-211ENST00000613795 FKBP5Q13451 457 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-211ENST00000613795 ERLIN2O94905 339 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 VPS53Q5VIR6 699 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 CYB5RLQ6IPT4 315 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 THEMISQ8N1K5 641 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-211ENST00000613795 ARAP1Q96P48 1450 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 CCDC183Q5T5S1 534 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 MEX3CQ5U5Q3 659 aaKnown RBP8.11□□□□□ -1.11
CLCN3-211ENST00000613795 CENPHQ9H3R5 247 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 ZSCAN12O43309 604 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 FIBPO43427 364 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 TNNT1P13805 278 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 ADRA2BP18089 450 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 KRT85P78386 507 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 SSR1P43307 286 aaKnown RBP8.11□□□□□ -1.11
CLCN3-211ENST00000613795 CCDC91Q7Z6B0 441 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 NUP62CLQ9H1M0 184 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 OGFRQ9NZT2 677 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 DACH1Q9UI36 760 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 SPDYE4A6NLX3 237 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 SLC3A2P08195 630 aaKnown RBP8.11□□□□□ -1.11
CLCN3-211ENST00000613795 KLHL40Q2TBA0 621 aa8.11□□□□□ -1.11
CLCN3-211ENST00000613795 NAP1L1P55209 391 aaKnown RBP8.1□□□□□ -1.11
CLCN3-211ENST00000613795 CT47A1Q5JQC4 288 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-211ENST00000613795 WDR63Q8IWG1 891 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 UBTFL1P0CB47 393 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-211ENST00000613795 CEP57L1Q8IYX8 460 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 CRACR2AQ9BSW2 395 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 PLEKHH1Q9ULM0 1364 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 ABCA10Q8WWZ4 1543 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 NF2P35240 595 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 RIC3Q7Z5B4 369 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 ZKSCAN5Q9Y2L8 839 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 EIF2S2P20042 333 aaKnown RBP8.1□□□□□ -1.11
CLCN3-211ENST00000613795 SNAPC4Q5SXM2 1469 aa8.1□□□□□ -1.11
CLCN3-211ENST00000613795 CLGNO14967 610 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 MNAT1P51948 309 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 SART3Q15020 963 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 KIF6Q6ZMV9 814 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 RBM33Q96EV2 1170 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 SMTNL1A8MU46 457 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 MAP3K11Q16584 847 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 IPO4Q8TEX9 1081 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 IQGAP2Q13576 1575 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 KIF14Q15058 1648 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 SERPINC1P01008 464 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 CCDC27Q2M243 656 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 TNPO1Q92973 898 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 FBXW7Q969H0 707 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 RASSF4Q9H2L5 321 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 RBM28Q9NW13 759 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 DHX16O60231 1041 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 TDO2P48775 406 aa8.09□□□□□ -1.11
CLCN3-211ENST00000613795 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
CLCN3-211ENST00000613795 GABPB1Q06547 395 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms