RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-223ENST00000611614 NEFMP07197 916 aa17.92■□□□□ 0.46
COPS7B-223ENST00000611614 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
COPS7B-223ENST00000611614 CDK12Q9NYV4 1490 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-223ENST00000611614 MAP2P11137 1827 aaKnown RBP17.91■□□□□ 0.46
COPS7B-223ENST00000611614 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-223ENST00000611614 COL3A1P02461 1466 aaPredicted RBP17.91■□□□□ 0.46
COPS7B-223ENST00000611614 TCP11L2Q8N4U5 519 aa17.91■□□□□ 0.46
COPS7B-223ENST00000611614 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
COPS7B-223ENST00000611614 BCAR3O75815 825 aa17.9■□□□□ 0.46
COPS7B-223ENST00000611614 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
COPS7B-223ENST00000611614 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
COPS7B-223ENST00000611614 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
COPS7B-223ENST00000611614 USP35Q9P2H5 1018 aa17.9■□□□□ 0.46
COPS7B-223ENST00000611614 MST1RQ04912 1400 aa17.89■□□□□ 0.45
COPS7B-223ENST00000611614 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
COPS7B-223ENST00000611614 XPCQ01831 940 aaPredicted RBP17.89■□□□□ 0.45
COPS7B-223ENST00000611614 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
COPS7B-223ENST00000611614 WDR63Q8IWG1 891 aa17.89■□□□□ 0.45
COPS7B-223ENST00000611614 FCHSD2O94868 740 aa17.88■□□□□ 0.45
COPS7B-223ENST00000611614 AMPHP49418 695 aa17.88■□□□□ 0.45
COPS7B-223ENST00000611614 CCDC27Q2M243 656 aa17.88■□□□□ 0.45
COPS7B-223ENST00000611614 LRRC7Q96NW7 1537 aa17.88■□□□□ 0.45
COPS7B-223ENST00000611614 NEUROD2Q15784 382 aa17.88■□□□□ 0.45
COPS7B-223ENST00000611614 RRP7AQ9Y3A4 280 aaKnown RBP17.88■□□□□ 0.45
COPS7B-223ENST00000611614 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
COPS7B-223ENST00000611614 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
COPS7B-223ENST00000611614 IL13P35225 146 aa17.87■□□□□ 0.45
COPS7B-223ENST00000611614 MAP3K19Q56UN5 1328 aa17.86■□□□□ 0.45
COPS7B-223ENST00000611614 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
COPS7B-223ENST00000611614 PDE3AQ14432 1141 aa17.86■□□□□ 0.45
COPS7B-223ENST00000611614 KCNH5Q8NCM2 988 aa17.86■□□□□ 0.45
COPS7B-223ENST00000611614 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
COPS7B-223ENST00000611614 FLT4P35916 1363 aa17.84■□□□□ 0.45
COPS7B-223ENST00000611614 DDRGK1Q96HY6 314 aa17.83■□□□□ 0.45
COPS7B-223ENST00000611614 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
COPS7B-223ENST00000611614 SKAP1Q86WV1 359 aa17.83■□□□□ 0.44
COPS7B-223ENST00000611614 HMOX1P09601 288 aa17.82■□□□□ 0.44
COPS7B-223ENST00000611614 PLEKHF1Q96S99 279 aa17.82■□□□□ 0.44
COPS7B-223ENST00000611614 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
COPS7B-223ENST00000611614 KIF24Q5T7B8 1368 aa17.82■□□□□ 0.44
COPS7B-223ENST00000611614 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
COPS7B-223ENST00000611614 EIF4A2Q14240 407 aaKnown RBP17.82■□□□□ 0.44
COPS7B-223ENST00000611614 RSPH6AQ9H0K4 717 aa17.81■□□□□ 0.44
COPS7B-223ENST00000611614 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
COPS7B-223ENST00000611614 RARSP54136 660 aaKnown RBP17.8■□□□□ 0.44
COPS7B-223ENST00000611614 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
COPS7B-223ENST00000611614 PLEKHG5O94827 1062 aa17.79■□□□□ 0.44
COPS7B-223ENST00000611614 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
COPS7B-223ENST00000611614 MYH16Q9H6N6 1097 aa17.79■□□□□ 0.44
COPS7B-223ENST00000611614 USP54Q70EL1 1684 aa17.78■□□□□ 0.44
COPS7B-223ENST00000611614 BRINP3Q76B58 766 aa17.78■□□□□ 0.44
COPS7B-223ENST00000611614 XIRP1Q702N8 1843 aaKnown RBP17.78■□□□□ 0.44
COPS7B-223ENST00000611614 ZBTB7CA1YPR0 619 aa17.78■□□□□ 0.44
COPS7B-223ENST00000611614 GCP02774 474 aa17.78■□□□□ 0.44
COPS7B-223ENST00000611614 HOXC9P31274 260 aa17.78■□□□□ 0.44
COPS7B-223ENST00000611614 DDX17Q92841 729 aaKnown RBP17.78■□□□□ 0.44
COPS7B-223ENST00000611614 RIPK4P57078 832 aa17.77■□□□□ 0.44
COPS7B-223ENST00000611614 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.44
COPS7B-223ENST00000611614 RTL1A6NKG5 1358 aa17.77■□□□□ 0.43
COPS7B-223ENST00000611614 PANK1Q8TE04 598 aa17.76■□□□□ 0.43
COPS7B-223ENST00000611614 FRAT1Q92837 279 aaPredicted RBP17.75■□□□□ 0.43
COPS7B-223ENST00000611614 CLUAP1Q96AJ1 413 aa17.75■□□□□ 0.43
COPS7B-223ENST00000611614 IP6K1Q92551 441 aa17.75■□□□□ 0.43
COPS7B-223ENST00000611614 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
COPS7B-223ENST00000611614 PEAK1Q9H792 1746 aa17.74■□□□□ 0.43
COPS7B-223ENST00000611614 AAMPQ13685 434 aa17.74■□□□□ 0.43
COPS7B-223ENST00000611614 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
COPS7B-223ENST00000611614 USP19O94966 1318 aa17.74■□□□□ 0.43
COPS7B-223ENST00000611614 TRPM3Q9HCF6 1732 aaPredicted RBP17.73■□□□□ 0.43
COPS7B-223ENST00000611614 ARHGEF10O15013 1369 aa17.73■□□□□ 0.43
COPS7B-223ENST00000611614 LTV1Q96GA3 475 aaPredicted RBP17.73■□□□□ 0.43
COPS7B-223ENST00000611614 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
COPS7B-223ENST00000611614 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
COPS7B-223ENST00000611614 PHACTR3Q96KR7 559 aa17.73■□□□□ 0.43
COPS7B-223ENST00000611614 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
COPS7B-223ENST00000611614 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
COPS7B-223ENST00000611614 IGHDP01880 384 aa17.72■□□□□ 0.43
COPS7B-223ENST00000611614 LMOD3Q0VAK6 560 aa17.72■□□□□ 0.43
COPS7B-223ENST00000611614 SPATA31A3Q5VYP0 1347 aa17.72■□□□□ 0.43
COPS7B-223ENST00000611614 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
COPS7B-223ENST00000611614 ARHGEF25Q86VW2 580 aa17.71■□□□□ 0.43
COPS7B-223ENST00000611614 EYA1Q99502 592 aa17.71■□□□□ 0.43
COPS7B-223ENST00000611614 NFAT5O94916 1531 aa17.71■□□□□ 0.43
COPS7B-223ENST00000611614 EIF5BO60841 1220 aaKnown RBP17.71■□□□□ 0.42
COPS7B-223ENST00000611614 CALD1Q05682 793 aaKnown RBP17.71■□□□□ 0.42
COPS7B-223ENST00000611614 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.42
COPS7B-223ENST00000611614 SLIT3O75094 1523 aa17.7■□□□□ 0.42
COPS7B-223ENST00000611614 IL16Q14005 1332 aa17.7■□□□□ 0.42
COPS7B-223ENST00000611614 PXDNQ92626 1479 aa17.7■□□□□ 0.42
COPS7B-223ENST00000611614 RGS3P49796 1198 aa17.7■□□□□ 0.42
COPS7B-223ENST00000611614 C8orf34Q49A92 452 aa17.7■□□□□ 0.42
COPS7B-223ENST00000611614 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
COPS7B-223ENST00000611614 BCL2L13Q9BXK5 485 aa17.69■□□□□ 0.42
COPS7B-223ENST00000611614 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
COPS7B-223ENST00000611614 RLBP1P12271 317 aa17.68■□□□□ 0.42
COPS7B-223ENST00000611614 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
COPS7B-223ENST00000611614 ALS2Q96Q42 1657 aa17.68■□□□□ 0.42
COPS7B-223ENST00000611614 SOS2Q07890 1332 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-223ENST00000611614 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
COPS7B-223ENST00000611614 TSR2Q969E8 191 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms