RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 SPON1Q9HCB6 807 aa24.98■■□□□ 1.59
MUC1-224ENST00000611577 PPP1R1BQ9UD71 204 aaPredicted RBP24.98■■□□□ 1.59
MUC1-224ENST00000611577 RGPD3A6NKT7 1758 aaPredicted RBP24.96■■□□□ 1.59
MUC1-224ENST00000611577 RGPD4Q7Z3J3 1758 aa24.96■■□□□ 1.59
MUC1-224ENST00000611577 CARD11Q9BXL7 1154 aa24.96■■□□□ 1.59
MUC1-224ENST00000611577 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.59
MUC1-224ENST00000611577 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
MUC1-224ENST00000611577 WDR17Q8IZU2 1322 aa24.95■■□□□ 1.58
MUC1-224ENST00000611577 KCNQ2O43526 872 aa24.95■■□□□ 1.58
MUC1-224ENST00000611577 COL18A1P39060 1754 aa24.95■■□□□ 1.58
MUC1-224ENST00000611577 WNK3Q9BYP7 1800 aa24.94■■□□□ 1.58
MUC1-224ENST00000611577 PLSCR1O15162 318 aa24.93■■□□□ 1.58
MUC1-224ENST00000611577 AXIN2Q9Y2T1 843 aa24.93■■□□□ 1.58
MUC1-224ENST00000611577 SBF2Q86WG5 1849 aa24.93■■□□□ 1.58
MUC1-224ENST00000611577 YY1P25490 414 aa24.92■■□□□ 1.58
MUC1-224ENST00000611577 SOX12O15370 315 aa24.91■■□□□ 1.58
MUC1-224ENST00000611577 PTF1AQ7RTS3 328 aa24.91■■□□□ 1.58
MUC1-224ENST00000611577 BCL11BQ9C0K0 894 aaPredicted RBP24.91■■□□□ 1.58
MUC1-224ENST00000611577 ANO8Q9HCE9 1232 aaPredicted RBP24.91■■□□□ 1.58
MUC1-224ENST00000611577 NINLQ9Y2I6 1382 aa24.91■■□□□ 1.58
MUC1-224ENST00000611577 TTC21BQ7Z4L5 1316 aa24.9■■□□□ 1.58
MUC1-224ENST00000611577 CDCA7Q9BWT1 371 aaPredicted RBP24.9■■□□□ 1.58
MUC1-224ENST00000611577 CSB-PGBD3P0DP91 1061 aa24.89■■□□□ 1.58
MUC1-224ENST00000611577 ARHGEF25Q86VW2 580 aa24.89■■□□□ 1.58
MUC1-224ENST00000611577 MARCH10Q8NA82 808 aaPredicted RBP24.89■■□□□ 1.58
MUC1-224ENST00000611577 KCNH5Q8NCM2 988 aa24.89■■□□□ 1.58
MUC1-224ENST00000611577 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
MUC1-224ENST00000611577 AKAP12Q02952 1782 aa24.87■■□□□ 1.57
MUC1-224ENST00000611577 BCL9O00512 1426 aa24.86■■□□□ 1.57
MUC1-224ENST00000611577 DCAF8L1A6NGE4 600 aa24.86■■□□□ 1.57
MUC1-224ENST00000611577 CARD10Q9BWT7 1032 aa24.86■■□□□ 1.57
MUC1-224ENST00000611577 TTC21AQ8NDW8 1320 aa24.86■■□□□ 1.57
MUC1-224ENST00000611577 CASZ1Q86V15 1759 aa24.85■■□□□ 1.57
MUC1-224ENST00000611577 NFAT5O94916 1531 aa24.84■■□□□ 1.57
MUC1-224ENST00000611577 RGPD5Q99666 1765 aa24.84■■□□□ 1.57
MUC1-224ENST00000611577 PROM2Q8N271 834 aa24.82■■□□□ 1.56
MUC1-224ENST00000611577 PDGFDQ9GZP0 370 aaPredicted RBP24.82■■□□□ 1.56
MUC1-224ENST00000611577 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
MUC1-224ENST00000611577 CCDC7Q96M83 1385 aa24.8■■□□□ 1.56
MUC1-224ENST00000611577 EXOC5O00471 708 aa24.8■■□□□ 1.56
MUC1-224ENST00000611577 ZBTB7AO95365 584 aa24.8■■□□□ 1.56
MUC1-224ENST00000611577 ABCC6O95255 1503 aa24.8■■□□□ 1.56
MUC1-224ENST00000611577 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
MUC1-224ENST00000611577 TXNRD1Q16881 649 aa24.79■■□□□ 1.56
MUC1-224ENST00000611577 STK32BQ9NY57 414 aa24.79■■□□□ 1.56
MUC1-224ENST00000611577 MYOM1P52179 1685 aa24.76■■□□□ 1.55
MUC1-224ENST00000611577 MON2Q7Z3U7 1717 aa24.76■■□□□ 1.55
MUC1-224ENST00000611577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.75■■□□□ 1.55
MUC1-224ENST00000611577 SLC15A2Q16348 729 aa24.74■■□□□ 1.55
MUC1-224ENST00000611577 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
MUC1-224ENST00000611577 USP47Q96K76 1375 aa24.74■■□□□ 1.55
MUC1-224ENST00000611577 PTGER2P43116 358 aa24.73■■□□□ 1.55
MUC1-224ENST00000611577 NHSQ6T4R5 1651 aa24.72■■□□□ 1.55
MUC1-224ENST00000611577 USP31Q70CQ4 1352 aa24.72■■□□□ 1.55
MUC1-224ENST00000611577 ERBB3P21860 1342 aa24.71■■□□□ 1.55
MUC1-224ENST00000611577 ACSBG1Q96GR2 724 aa24.71■■□□□ 1.55
MUC1-224ENST00000611577 NLRP2Q9NX02 1062 aa24.71■■□□□ 1.55
MUC1-224ENST00000611577 ST20-MTHFSA0A0A6YYL1 179 aa24.7■■□□□ 1.54
MUC1-224ENST00000611577 NME9Q86XW9 330 aa24.7■■□□□ 1.54
MUC1-224ENST00000611577 SBNO2Q9Y2G9 1366 aa24.69■■□□□ 1.54
MUC1-224ENST00000611577 USP54Q70EL1 1684 aa24.69■■□□□ 1.54
MUC1-224ENST00000611577 CD163L1Q9NR16 1453 aa24.68■■□□□ 1.54
MUC1-224ENST00000611577 IL2RBP14784 551 aa24.67■■□□□ 1.54
MUC1-224ENST00000611577 TMC1Q8TDI8 760 aa24.67■■□□□ 1.54
MUC1-224ENST00000611577 MTFR1LQ9H019 292 aa24.67■■□□□ 1.54
MUC1-224ENST00000611577 LTN1O94822 1766 aa24.67■■□□□ 1.54
MUC1-224ENST00000611577 SLC24A1O60721 1099 aa24.66■■□□□ 1.54
MUC1-224ENST00000611577 FHDC1Q9C0D6 1143 aaPredicted RBP24.66■■□□□ 1.54
MUC1-224ENST00000611577 UTRNP46939 3433 aa24.66■■□□□ 1.54
MUC1-224ENST00000611577 HDGFL2Q7Z4V5 671 aaPredicted RBP24.65■■□□□ 1.54
MUC1-224ENST00000611577 ANKRD24Q8TF21 1146 aa24.65■■□□□ 1.54
MUC1-224ENST00000611577 PAPPAQ13219 1627 aa24.64■■□□□ 1.53
MUC1-224ENST00000611577 SYT17Q9BSW7 474 aa24.63■■□□□ 1.53
MUC1-224ENST00000611577 EIF4G2P78344 907 aaKnown RBP eCLIP24.62■■□□□ 1.53
MUC1-224ENST00000611577 SGIP1Q9BQI5 828 aa24.62■■□□□ 1.53
MUC1-224ENST00000611577 EDC4Q6P2E9 1401 aaKnown RBP24.61■■□□□ 1.53
MUC1-224ENST00000611577 BTAF1O14981 1849 aa24.61■■□□□ 1.53
MUC1-224ENST00000611577 SLC12A5Q9H2X9 1139 aa24.61■■□□□ 1.53
MUC1-224ENST00000611577 TMF1P82094 1093 aa24.59■■□□□ 1.53
MUC1-224ENST00000611577 TESK2Q96S53 571 aa24.59■■□□□ 1.53
MUC1-224ENST00000611577 A0A1W2PP64 1363 aa24.58■■□□□ 1.53
MUC1-224ENST00000611577 ZNF827Q17R98 1081 aa24.58■■□□□ 1.53
MUC1-224ENST00000611577 ARXQ96QS3 562 aa24.58■■□□□ 1.53
MUC1-224ENST00000611577 TERF2IPQ9NYB0 399 aa24.57■■□□□ 1.52
MUC1-224ENST00000611577 ZNF784Q8NCA9 323 aaPredicted RBP24.56■■□□□ 1.52
MUC1-224ENST00000611577 HSPA5P11021 654 aaKnown RBP24.55■■□□□ 1.52
MUC1-224ENST00000611577 LRRC4BQ9NT99 713 aa24.55■■□□□ 1.52
MUC1-224ENST00000611577 CDCA8Q53HL2 280 aa24.54■■□□□ 1.52
MUC1-224ENST00000611577 LTV1Q96GA3 475 aaPredicted RBP24.54■■□□□ 1.52
MUC1-224ENST00000611577 KAT6BQ8WYB5 2073 aa24.54■■□□□ 1.52
MUC1-224ENST00000611577 DDX54Q8TDD1 881 aaKnown RBP24.53■■□□□ 1.52
MUC1-224ENST00000611577 IP6K1Q92551 441 aa24.53■■□□□ 1.52
MUC1-224ENST00000611577 MAP3K5Q99683 1374 aa24.53■■□□□ 1.52
MUC1-224ENST00000611577 FAM208AQ9UK61 1670 aaKnown RBP24.52■■□□□ 1.52
MUC1-224ENST00000611577 AKT1S1Q96B36 256 aa24.5■■□□□ 1.51
MUC1-224ENST00000611577 PUS7Q96PZ0 661 aaKnown RBP24.5■■□□□ 1.51
MUC1-224ENST00000611577 SLC27A3Q5K4L6 730 aa24.49■■□□□ 1.51
MUC1-224ENST00000611577 SYTL4Q96C24 671 aaPredicted RBP24.48■■□□□ 1.51
MUC1-224ENST00000611577 KLHL34Q8N239 644 aa24.47■■□□□ 1.51
MUC1-224ENST00000611577 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms