RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LIAT1Q6ZQX7 453 aa8.67□□□□□ -1.02
LINC00397-202ENST00000606785 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
LINC00397-202ENST00000606785 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
LINC00397-202ENST00000606785 FOXD4L4Q8WXT5 416 aaPredicted RBP8.67□□□□□ -1.02
LINC00397-202ENST00000606785 TNFRSF10AO00220 468 aa8.66□□□□□ -1.02
LINC00397-202ENST00000606785 TLL1O43897 1013 aa8.66□□□□□ -1.02
LINC00397-202ENST00000606785 SKIP12755 728 aa8.66□□□□□ -1.02
LINC00397-202ENST00000606785 SND1Q7KZF4 910 aaKnown RBP eCLIP8.66□□□□□ -1.02
LINC00397-202ENST00000606785 ZMIZ1Q9ULJ6 1067 aa8.66□□□□□ -1.02
LINC00397-202ENST00000606785 USP17L5A8MUK1 530 aa8.65□□□□□ -1.02
LINC00397-202ENST00000606785 ST8SIA5O15466 376 aa8.65□□□□□ -1.02
LINC00397-202ENST00000606785 CTHP32929 405 aa8.65□□□□□ -1.02
LINC00397-202ENST00000606785 ZNF592Q92610 1267 aa8.65□□□□□ -1.02
LINC00397-202ENST00000606785 STK17AQ9UEE5 414 aa8.65□□□□□ -1.02
LINC00397-202ENST00000606785 GNEQ9Y223 722 aaKnown RBP8.65□□□□□ -1.02
LINC00397-202ENST00000606785 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
LINC00397-202ENST00000606785 S1PR4O95977 384 aa8.64□□□□□ -1.03
LINC00397-202ENST00000606785 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
LINC00397-202ENST00000606785 TMEM164Q5U3C3 297 aa8.64□□□□□ -1.03
LINC00397-202ENST00000606785 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
LINC00397-202ENST00000606785 NOVA2Q9UNW9 492 aaKnown RBP8.64□□□□□ -1.03
LINC00397-202ENST00000606785 PPEF1O14829 653 aaPredicted RBP8.63□□□□□ -1.03
LINC00397-202ENST00000606785 CCNYL3P0C7X3 344 aa8.63□□□□□ -1.03
LINC00397-202ENST00000606785 MSS51Q4VC12 460 aa8.63□□□□□ -1.03
LINC00397-202ENST00000606785 PDXDC2PQ6P474 469 aa8.63□□□□□ -1.03
LINC00397-202ENST00000606785 ARMC2Q8NEN0 867 aa8.63□□□□□ -1.03
LINC00397-202ENST00000606785 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
LINC00397-202ENST00000606785 STK32AQ8WU08 396 aa8.63□□□□□ -1.03
LINC00397-202ENST00000606785 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
LINC00397-202ENST00000606785 FAM196BA6NMK8 535 aa8.62□□□□□ -1.03
LINC00397-202ENST00000606785 WFS1O76024 890 aa8.62□□□□□ -1.03
LINC00397-202ENST00000606785 MCCD1P59942 119 aaPredicted RBP8.62□□□□□ -1.03
LINC00397-202ENST00000606785 PTK2Q05397 1052 aa8.62□□□□□ -1.03
LINC00397-202ENST00000606785 EVA1BQ9NVM1 165 aa8.62□□□□□ -1.03
LINC00397-202ENST00000606785 CEP126Q9P2H0 1117 aa8.62□□□□□ -1.03
LINC00397-202ENST00000606785 DXOO77932 396 aaKnown RBP8.61□□□□□ -1.03
LINC00397-202ENST00000606785 ADH1BP00325 375 aa8.61□□□□□ -1.03
LINC00397-202ENST00000606785 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
LINC00397-202ENST00000606785 DEPDC4Q8N2C3 294 aa8.61□□□□□ -1.03
LINC00397-202ENST00000606785 MKRN1Q9UHC7 482 aaKnown RBP8.61□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L10C9JJH3 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L12C9JPN9 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L21D6R901 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 RBM25P49756 843 aaKnown RBP8.6□□□□□ -1.03
LINC00397-202ENST00000606785 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 KCNH2Q12809 1159 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 NBPF14Q5TI25 921 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 NUDT12Q9BQG2 462 aa8.6□□□□□ -1.03
LINC00397-202ENST00000606785 ATP5J2-PTCD1G3V325 749 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 WIPF1O43516 503 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 LZTS3O60299 673 aaPredicted RBP8.59□□□□□ -1.03
LINC00397-202ENST00000606785 MMP16P51512 607 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
LINC00397-202ENST00000606785 LARP1Q6PKG0 1096 aaKnown RBP8.59□□□□□ -1.03
LINC00397-202ENST00000606785 RNF135Q8IUD6 432 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 PHTF2Q8N3S3 785 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
LINC00397-202ENST00000606785 CCER1Q8TC90 406 aaPredicted RBP8.59□□□□□ -1.03
LINC00397-202ENST00000606785 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 OCSTAMPQ9BR26 566 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 PCDHB9Q9Y5E1 797 aa8.59□□□□□ -1.03
LINC00397-202ENST00000606785 INSM1Q01101 510 aaPredicted RBP8.58□□□□□ -1.04
LINC00397-202ENST00000606785 PTK7Q13308 1070 aa8.58□□□□□ -1.04
LINC00397-202ENST00000606785 NCOA4Q13772 614 aa8.58□□□□□ -1.04
LINC00397-202ENST00000606785 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
LINC00397-202ENST00000606785 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
LINC00397-202ENST00000606785 SPSB2Q99619 263 aa8.58□□□□□ -1.04
LINC00397-202ENST00000606785 AMOTL2Q9Y2J4 779 aa8.58□□□□□ -1.04
LINC00397-202ENST00000606785 AVPP01185 164 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 RASA1P20936 1047 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 PLA2G2CQ5R387 149 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 PKD2L1Q9P0L9 805 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 CHIC2Q9UKJ5 165 aa8.57□□□□□ -1.04
LINC00397-202ENST00000606785 NFX1Q12986 1120 aaKnown RBP8.56□□□□□ -1.04
LINC00397-202ENST00000606785 MAP7D1Q3KQU3 841 aa8.56□□□□□ -1.04
LINC00397-202ENST00000606785 FAM200AQ8TCP9 573 aa8.56□□□□□ -1.04
LINC00397-202ENST00000606785 CDCA7Q9BWT1 371 aaPredicted RBP8.56□□□□□ -1.04
LINC00397-202ENST00000606785 SSFA2P28290 1259 aa8.55□□□□□ -1.04
LINC00397-202ENST00000606785 CTC1Q2NKJ3 1217 aa8.55□□□□□ -1.04
LINC00397-202ENST00000606785 ADAM32Q8TC27 787 aa8.55□□□□□ -1.04
LINC00397-202ENST00000606785 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
LINC00397-202ENST00000606785 ARHGAP9Q9BRR9 750 aa8.55□□□□□ -1.04
LINC00397-202ENST00000606785 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
LINC00397-202ENST00000606785 C11orf95C9JLR9 678 aaPredicted RBP8.54□□□□□ -1.04
LINC00397-202ENST00000606785 ARID4AP29374 1257 aaPredicted RBP8.54□□□□□ -1.04
LINC00397-202ENST00000606785 FAM69CQ0P6D2 419 aa8.54□□□□□ -1.04
LINC00397-202ENST00000606785 EML3Q32P44 896 aa8.54□□□□□ -1.04
LINC00397-202ENST00000606785 ANKMY2Q8IV38 441 aa8.54□□□□□ -1.04
LINC00397-202ENST00000606785 SLAIN2Q9P270 581 aa8.54□□□□□ -1.04
LINC00397-202ENST00000606785 GMPR2Q9P2T1 348 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms