RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 MYO6Q9UM54 1294 aa10.27□□□□□ -0.77
CSMD1-216ENST00000602557 LRRFIP2Q9Y608 721 aaKnown RBP10.27□□□□□ -0.77
CSMD1-216ENST00000602557 KIF21BO75037 1637 aa10.27□□□□□ -0.77
CSMD1-216ENST00000602557 SERPINC1P01008 464 aa10.27□□□□□ -0.77
CSMD1-216ENST00000602557 XBP1P17861 261 aa10.27□□□□□ -0.77
CSMD1-216ENST00000602557 FILIP1Q7Z7B0 1213 aa10.27□□□□□ -0.77
CSMD1-216ENST00000602557 TDO2P48775 406 aa10.27□□□□□ -0.77
CSMD1-216ENST00000602557 SART3Q15020 963 aaKnown RBP10.26□□□□□ -0.77
CSMD1-216ENST00000602557 FAM177BA6PVY3 158 aa10.26□□□□□ -0.77
CSMD1-216ENST00000602557 GBP2P32456 591 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-216ENST00000602557 PDCP20941 246 aa10.26□□□□□ -0.77
CSMD1-216ENST00000602557 ZBTB9Q96C00 473 aa10.26□□□□□ -0.77
CSMD1-216ENST00000602557 CCDC94Q9BW85 323 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-216ENST00000602557 RABEP1Q15276 862 aa10.26□□□□□ -0.77
CSMD1-216ENST00000602557 IKQ13123 557 aaPredicted RBP10.26□□□□□ -0.77
CSMD1-216ENST00000602557 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 RRBP1Q9P2E9 1410 aaKnown RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 K7ELQ4 463 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 SMARCE1Q969G3 411 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 WASHC2AQ641Q2 1341 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 RAPGEF4Q8WZA2 1011 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 GTPBP4Q9BZE4 634 aaKnown RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 GAPVD1Q14C86 1478 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 GOLGA6L10A0A0M3HER8 536 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 TRMT1Q9NXH9 659 aaKnown RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 CDK5RAP3Q96JB5 506 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 SURF6O75683 361 aaKnown RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 ANKRD62A6NC57 917 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 TTC31Q49AM3 519 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 PPFIBP1Q86W92 1011 aa10.25□□□□□ -0.77
CSMD1-216ENST00000602557 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
CSMD1-216ENST00000602557 PTPN14Q15678 1187 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 FGD5Q6ZNL6 1462 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 LRRC9Q6ZRR7 1453 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 PANK2Q9BZ23 570 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 FAM107BQ9H098 131 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 FYCO1Q9BQS8 1478 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 NF2P35240 595 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 KRT222Q8N1A0 295 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 TXLNBQ8N3L3 684 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 ERLIN2O94905 339 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 STK38Q15208 465 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 ZNF396Q96N95 335 aaPredicted RBP10.24□□□□□ -0.77
CSMD1-216ENST00000602557 CAMK4Q16566 473 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 TBC1D2BQ9UPU7 963 aa10.24□□□□□ -0.77
CSMD1-216ENST00000602557 MTHFSP49914 203 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 TMEM132EQ6IEE7 984 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
CSMD1-216ENST00000602557 CCDC181Q5TID7 509 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 KRI1Q8N9T8 703 aaKnown RBP10.23□□□□□ -0.77
CSMD1-216ENST00000602557 NOB1Q9ULX3 412 aaKnown RBP10.23□□□□□ -0.77
CSMD1-216ENST00000602557 ATP2C2O75185 946 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 TCP11L2Q8N4U5 519 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 RSPH14Q9UHP6 348 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 TXLNAP40222 546 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 STK3Q13188 491 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 TMEM132AQ24JP5 1023 aa10.23□□□□□ -0.77
CSMD1-216ENST00000602557 ZNF830Q96NB3 372 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-216ENST00000602557 CRACR2AQ9BSW2 395 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 NCOA2Q15596 1464 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 ME1P48163 572 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 KRT18P05783 430 aaKnown RBP10.22□□□□□ -0.77
CSMD1-216ENST00000602557 SEPT7Q16181 437 aaKnown RBP10.22□□□□□ -0.77
CSMD1-216ENST00000602557 MAP4K4O95819 1239 aaPredicted RBP10.22□□□□□ -0.77
CSMD1-216ENST00000602557 CCDC30Q5VVM6 783 aa10.22□□□□□ -0.77
CSMD1-216ENST00000602557 GNAI3P08754 354 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
CSMD1-216ENST00000602557 PRKAR2BP31323 418 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 CASQ1P31415 396 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 C10orf67Q8IYJ2 551 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 LIG1P18858 919 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 FILIP1LQ4L180 1135 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 USP25Q9UHP3 1055 aa10.21□□□□□ -0.77
CSMD1-216ENST00000602557 SMAP1Q8IYB5 467 aaPredicted RBP10.21□□□□□ -0.78
CSMD1-216ENST00000602557 WDR97A6NE52 1622 aa10.21□□□□□ -0.78
CSMD1-216ENST00000602557 HIP1O00291 1037 aa10.21□□□□□ -0.78
CSMD1-216ENST00000602557 SLC3A2P08195 630 aaKnown RBP10.21□□□□□ -0.78
CSMD1-216ENST00000602557 CLCN1P35523 988 aa10.21□□□□□ -0.78
CSMD1-216ENST00000602557 ATF3P18847 181 aa10.21□□□□□ -0.78
CSMD1-216ENST00000602557 SLC26A8Q96RN1 970 aa10.21□□□□□ -0.78
CSMD1-216ENST00000602557 KIF6Q6ZMV9 814 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 SMG6Q86US8 1419 aaKnown RBP10.2□□□□□ -0.78
CSMD1-216ENST00000602557 SSFA2P28290 1259 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 SIL1Q9H173 461 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 GNAI2P04899 355 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 MCM2P49736 904 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 CERS3Q8IU89 383 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 PPP2R1AP30153 589 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 MICALCLQ6ZW33 695 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 ZNHIT6Q9NWK9 470 aaKnown RBP10.2□□□□□ -0.78
CSMD1-216ENST00000602557 RAD54L2Q9Y4B4 1467 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 NLRP6P59044 892 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms