RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 KIF3CO14782 793 aa17.76■□□□□ 0.43
HCG18-241ENST00000602290 ZNF827Q17R98 1081 aa17.75■□□□□ 0.43
HCG18-241ENST00000602290 TNS4Q8IZW8 715 aa17.75■□□□□ 0.43
HCG18-241ENST00000602290 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
HCG18-241ENST00000602290 USP19O94966 1318 aa17.74■□□□□ 0.43
HCG18-241ENST00000602290 NHSQ6T4R5 1651 aa17.74■□□□□ 0.43
HCG18-241ENST00000602290 PAK3O75914 559 aaPredicted RBP17.74■□□□□ 0.43
HCG18-241ENST00000602290 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■□□ 15.2
HCG18-241ENST00000602290 DDB1Q16531 1140 aa17.74■□□□□ 0.43
HCG18-241ENST00000602290 KLHL34Q8N239 644 aa17.72■□□□□ 0.43
HCG18-241ENST00000602290 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
HCG18-241ENST00000602290 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
HCG18-241ENST00000602290 C14orf93Q9H972 538 aaKnown RBP17.71■□□□□ 0.43
HCG18-241ENST00000602290 PCDH10Q9P2E7 1040 aa17.71■□□□□ 0.43
HCG18-241ENST00000602290 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
HCG18-241ENST00000602290 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
HCG18-241ENST00000602290 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
HCG18-241ENST00000602290 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
HCG18-241ENST00000602290 ADGRB1O14514 1584 aa17.68■□□□□ 0.42
HCG18-241ENST00000602290 POLD1P28340 1107 aa17.68■□□□□ 0.42
HCG18-241ENST00000602290 NUTM2GQ5VZR2 741 aa17.68■□□□□ 0.42
HCG18-241ENST00000602290 TUBGCP6Q96RT7 1819 aa17.66■□□□□ 0.42
HCG18-241ENST00000602290 HIRIP3Q9BW71 556 aaPredicted RBP17.66■□□□□ 0.42
HCG18-241ENST00000602290 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
HCG18-241ENST00000602290 ARHGEF28Q8N1W1 1705 aaKnown RBP17.65■□□□□ 0.42
HCG18-241ENST00000602290 AKT1S1Q96B36 256 aa17.65■□□□□ 0.42
HCG18-241ENST00000602290 KLRG1Q96E93 195 aa17.65■□□□□ 0.42
HCG18-241ENST00000602290 PNPLA7Q6ZV29 1317 aa17.65■□□□□ 0.42
HCG18-241ENST00000602290 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
HCG18-241ENST00000602290 TRPM1Q7Z4N2 1603 aa17.64■□□□□ 0.41
HCG18-241ENST00000602290 LRRC4BQ9NT99 713 aa17.63■□□□□ 0.41
HCG18-241ENST00000602290 TNS2Q63HR2 1409 aa17.63■□□□□ 0.41
HCG18-241ENST00000602290 COL18A1P39060 1754 aa17.62■□□□□ 0.41
HCG18-241ENST00000602290 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
HCG18-241ENST00000602290 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
HCG18-241ENST00000602290 POGKQ9P215 609 aa17.62■□□□□ 0.41
HCG18-241ENST00000602290 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
HCG18-241ENST00000602290 BTAF1O14981 1849 aa17.61■□□□□ 0.41
HCG18-241ENST00000602290 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
HCG18-241ENST00000602290 ABCC6O95255 1503 aa17.61■□□□□ 0.41
HCG18-241ENST00000602290 CICQ96RK0 1608 aaPredicted RBP17.61■□□□□ 0.41
HCG18-241ENST00000602290 MINK1Q8N4C8 1332 aaPredicted RBP17.6■□□□□ 0.41
HCG18-241ENST00000602290 SLIT3O75094 1523 aa17.6■□□□□ 0.41
HCG18-241ENST00000602290 LOC105371045A0A1W2PR82 267 aa17.59■□□□□ 0.41
HCG18-241ENST00000602290 GCP02774 474 aa17.59■□□□□ 0.41
HCG18-241ENST00000602290 ITGAEP38570 1179 aa17.59■□□□□ 0.41
HCG18-241ENST00000602290 WDR17Q8IZU2 1322 aa17.58■□□□□ 0.4
HCG18-241ENST00000602290 TOMM70O94826 608 aa17.58■□□□□ 0.4
HCG18-241ENST00000602290 TOM1L2Q6ZVM7 507 aa17.56■□□□□ 0.4
HCG18-241ENST00000602290 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
HCG18-241ENST00000602290 WWC3Q9ULE0 1092 aa17.56■□□□□ 0.4
HCG18-241ENST00000602290 USP6P35125 1406 aa17.55■□□□□ 0.4
HCG18-241ENST00000602290 HTRA3P83110 453 aa17.55■□□□□ 0.4
HCG18-241ENST00000602290 ABTB2Q8N961 1025 aa17.54■□□□□ 0.4
HCG18-241ENST00000602290 NUDT16Q96DE0 195 aaKnown RBP17.54■□□□□ 0.4
HCG18-241ENST00000602290 ACEP12821 1306 aa17.53■□□□□ 0.4
HCG18-241ENST00000602290 ACSBG1Q96GR2 724 aa17.51■□□□□ 0.39
HCG18-241ENST00000602290 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
HCG18-241ENST00000602290 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
HCG18-241ENST00000602290 AXIN2Q9Y2T1 843 aa17.5■□□□□ 0.39
HCG18-241ENST00000602290 CD2APQ9Y5K6 639 aa17.5■□□□□ 0.39
HCG18-241ENST00000602290 SLC27A3Q5K4L6 730 aa17.49■□□□□ 0.39
HCG18-241ENST00000602290 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
HCG18-241ENST00000602290 TRAK1Q9UPV9 953 aa17.49■□□□□ 0.39
HCG18-241ENST00000602290 PPIP5K1Q6PFW1 1433 aa17.48■□□□□ 0.39
HCG18-241ENST00000602290 PLEKHG3A1L390 1219 aa17.48■□□□□ 0.39
HCG18-241ENST00000602290 EXOC5O00471 708 aa17.48■□□□□ 0.39
HCG18-241ENST00000602290 RBM46Q8TBY0 533 aaKnown RBP17.48■□□□□ 0.39
HCG18-241ENST00000602290 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
HCG18-241ENST00000602290 CCDC7Q96M83 1385 aa17.46■□□□□ 0.39
HCG18-241ENST00000602290 TFCP2L1Q9NZI6 479 aa17.46■□□□□ 0.39
HCG18-241ENST00000602290 HSPA1AP0DMV8 641 aaKnown RBP17.45■□□□□ 0.38
HCG18-241ENST00000602290 HSPA1BP0DMV9 641 aaKnown RBP17.45■□□□□ 0.38
HCG18-241ENST00000602290 LY75O60449 1722 aa17.44■□□□□ 0.38
HCG18-241ENST00000602290 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
HCG18-241ENST00000602290 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
HCG18-241ENST00000602290 IGSF1Q8N6C5 1336 aa17.43■□□□□ 0.38
HCG18-241ENST00000602290 ZBTB7CA1YPR0 619 aa17.42■□□□□ 0.38
HCG18-241ENST00000602290 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
HCG18-241ENST00000602290 RGPD5Q99666 1765 aa17.42■□□□□ 0.38
HCG18-241ENST00000602290 FSTL1Q12841 308 aa17.41■□□□□ 0.38
HCG18-241ENST00000602290 MSL1Q68DK7 614 aa17.41■□□□□ 0.38
HCG18-241ENST00000602290 COL23A1Q86Y22 540 aaPredicted RBP17.41■□□□□ 0.38
HCG18-241ENST00000602290 C10orf71Q711Q0 1435 aa17.4■□□□□ 0.38
HCG18-241ENST00000602290 KCNQ4P56696 695 aa17.39■□□□□ 0.37
HCG18-241ENST00000602290 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
HCG18-241ENST00000602290 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
HCG18-241ENST00000602290 NSD2O96028 1365 aa17.38■□□□□ 0.37
HCG18-241ENST00000602290 NFAT5O94916 1531 aa17.37■□□□□ 0.37
HCG18-241ENST00000602290 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
HCG18-241ENST00000602290 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
HCG18-241ENST00000602290 NLRP6P59044 892 aa17.34■□□□□ 0.37
HCG18-241ENST00000602290 KIAA1551Q9HCM1 1747 aa17.34■□□□□ 0.37
HCG18-241ENST00000602290 FAM161AQ3B820 660 aa17.33■□□□□ 0.36
HCG18-241ENST00000602290 DOT1LQ8TEK3 1739 aa17.32■□□□□ 0.36
HCG18-241ENST00000602290 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
HCG18-241ENST00000602290 TOGARAM1Q9Y4F4 1720 aa17.31■□□□□ 0.36
HCG18-241ENST00000602290 C5P01031 1676 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 ANKRD36BQ8N2N9 1353 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 PLEKHG2Q9H7P9 1386 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms