RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 CD163L1Q9NR16 1453 aa25.66■■□□□ 1.7
CHMP2A-208ENST00000601220 NFAT5O94916 1531 aa25.65■■□□□ 1.7
CHMP2A-208ENST00000601220 DDB1Q16531 1140 aa25.65■■□□□ 1.7
CHMP2A-208ENST00000601220 CARD10Q9BWT7 1032 aa25.64■■□□□ 1.7
CHMP2A-208ENST00000601220 RREB1Q92766 1687 aa25.64■■□□□ 1.69
CHMP2A-208ENST00000601220 OVOS2A0A0G2JMS6 1433 aa25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 OVOS2A0A0J9YW53 1432 aa25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 OVOS2Q6IE36 1432 aa25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 SOX12O15370 315 aa25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 MARCH10Q8NA82 808 aaPredicted RBP25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 USP31Q70CQ4 1352 aa25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 LRRC37A3O60309 1634 aa25.63■■□□□ 1.69
CHMP2A-208ENST00000601220 PTF1AQ7RTS3 328 aa25.62■■□□□ 1.69
CHMP2A-208ENST00000601220 CDCA7Q9BWT1 371 aaPredicted RBP25.61■■□□□ 1.69
CHMP2A-208ENST00000601220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.6■■□□□ 1.69
CHMP2A-208ENST00000601220 BCL9O00512 1426 aa25.6■■□□□ 1.69
CHMP2A-208ENST00000601220 NUP188Q5SRE5 1749 aa25.6■■□□□ 1.69
CHMP2A-208ENST00000601220 PLSCR1O15162 318 aa25.59■■□□□ 1.69
CHMP2A-208ENST00000601220 NME9Q86XW9 330 aa25.59■■□□□ 1.69
CHMP2A-208ENST00000601220 SLC12A5Q9H2X9 1139 aa25.59■■□□□ 1.69
CHMP2A-208ENST00000601220 MON2Q7Z3U7 1717 aa25.58■■□□□ 1.69
CHMP2A-208ENST00000601220 NBPF14Q5TI25 921 aa25.58■■□□□ 1.69
CHMP2A-208ENST00000601220 BCL11BQ9C0K0 894 aaPredicted RBP25.58■■□□□ 1.69
CHMP2A-208ENST00000601220 PUS7Q96PZ0 661 aaKnown RBP25.57■■□□□ 1.68
CHMP2A-208ENST00000601220 CSB-PGBD3P0DP91 1061 aa25.56■■□□□ 1.68
CHMP2A-208ENST00000601220 ABCC6O95255 1503 aa25.56■■□□□ 1.68
CHMP2A-208ENST00000601220 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
CHMP2A-208ENST00000601220 TMC1Q8TDI8 760 aa25.55■■□□□ 1.68
CHMP2A-208ENST00000601220 RGPD5Q99666 1765 aa25.54■■□□□ 1.68
CHMP2A-208ENST00000601220 PROM2Q8N271 834 aa25.54■■□□□ 1.68
CHMP2A-208ENST00000601220 USP54Q70EL1 1684 aa25.54■■□□□ 1.68
CHMP2A-208ENST00000601220 WNK3Q9BYP7 1800 aa25.53■■□□□ 1.68
CHMP2A-208ENST00000601220 TESK2Q96S53 571 aa25.53■■□□□ 1.68
CHMP2A-208ENST00000601220 CCDC7Q96M83 1385 aa25.53■■□□□ 1.68
CHMP2A-208ENST00000601220 EXOC5O00471 708 aa25.52■■□□□ 1.68
CHMP2A-208ENST00000601220 HDGFL2Q7Z4V5 671 aaPredicted RBP25.52■■□□□ 1.68
CHMP2A-208ENST00000601220 SBF2Q86WG5 1849 aa25.51■■□□□ 1.67
CHMP2A-208ENST00000601220 ERBB3P21860 1342 aa25.51■■□□□ 1.67
CHMP2A-208ENST00000601220 A0A1W2PP64 1363 aa25.51■■□□□ 1.67
CHMP2A-208ENST00000601220 EDC4Q6P2E9 1401 aaKnown RBP25.51■■□□□ 1.67
CHMP2A-208ENST00000601220 ANO8Q9HCE9 1232 aaPredicted RBP25.49■■□□□ 1.67
CHMP2A-208ENST00000601220 RGPD3A6NKT7 1758 aaPredicted RBP25.49■■□□□ 1.67
CHMP2A-208ENST00000601220 RGPD4Q7Z3J3 1758 aa25.49■■□□□ 1.67
CHMP2A-208ENST00000601220 TERF2IPQ9NYB0 399 aa25.48■■□□□ 1.67
CHMP2A-208ENST00000601220 ST20-MTHFSA0A0A6YYL1 179 aa25.47■■□□□ 1.67
CHMP2A-208ENST00000601220 TNS2Q63HR2 1409 aa25.46■■□□□ 1.67
CHMP2A-208ENST00000601220 ANKRD24Q8TF21 1146 aa25.45■■□□□ 1.66
CHMP2A-208ENST00000601220 NLRP2Q9NX02 1062 aa25.45■■□□□ 1.66
CHMP2A-208ENST00000601220 KCNQ2O43526 872 aa25.44■■□□□ 1.66
CHMP2A-208ENST00000601220 SPON1Q9HCB6 807 aa25.44■■□□□ 1.66
CHMP2A-208ENST00000601220 IL2RBP14784 551 aa25.41■■□□□ 1.66
CHMP2A-208ENST00000601220 TXNRD1Q16881 649 aa25.41■■□□□ 1.66
CHMP2A-208ENST00000601220 PDGFDQ9GZP0 370 aaPredicted RBP25.41■■□□□ 1.66
CHMP2A-208ENST00000601220 NINLQ9Y2I6 1382 aa25.41■■□□□ 1.66
CHMP2A-208ENST00000601220 IP6K1Q92551 441 aa25.4■■□□□ 1.66
CHMP2A-208ENST00000601220 LTN1O94822 1766 aa25.38■■□□□ 1.65
CHMP2A-208ENST00000601220 SLC24A1O60721 1099 aa25.37■■□□□ 1.65
CHMP2A-208ENST00000601220 ACSBG1Q96GR2 724 aa25.36■■□□□ 1.65
CHMP2A-208ENST00000601220 FBLN1P23142 703 aa25.35■■□□□ 1.65
CHMP2A-208ENST00000601220 TRIM26Q12899 539 aaPredicted RBP25.35■■□□□ 1.65
CHMP2A-208ENST00000601220 CASZ1Q86V15 1759 aa25.35■■□□□ 1.65
CHMP2A-208ENST00000601220 SLC15A2Q16348 729 aa25.34■■□□□ 1.65
CHMP2A-208ENST00000601220 MAP3K19Q56UN5 1328 aa25.34■■□□□ 1.65
CHMP2A-208ENST00000601220 NHSQ6T4R5 1651 aa25.32■■□□□ 1.64
CHMP2A-208ENST00000601220 COG3Q96JB2 828 aa25.32■■□□□ 1.64
CHMP2A-208ENST00000601220 ANKRD36BQ8N2N9 1353 aa25.31■■□□□ 1.64
CHMP2A-208ENST00000601220 HOXC9P31274 260 aa25.31■■□□□ 1.64
CHMP2A-208ENST00000601220 PTGER2P43116 358 aa25.31■■□□□ 1.64
CHMP2A-208ENST00000601220 STK32BQ9NY57 414 aa25.31■■□□□ 1.64
CHMP2A-208ENST00000601220 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
CHMP2A-208ENST00000601220 ZBTB7AO95365 584 aa25.3■■□□□ 1.64
CHMP2A-208ENST00000601220 LTV1Q96GA3 475 aaPredicted RBP25.3■■□□□ 1.64
CHMP2A-208ENST00000601220 FYB1O15117 783 aa25.29■■□□□ 1.64
CHMP2A-208ENST00000601220 USP47Q96K76 1375 aa25.28■■□□□ 1.64
CHMP2A-208ENST00000601220 TMF1P82094 1093 aa25.26■■□□□ 1.63
CHMP2A-208ENST00000601220 LRRC4BQ9NT99 713 aa25.26■■□□□ 1.63
CHMP2A-208ENST00000601220 AMPHP49418 695 aa25.25■■□□□ 1.63
CHMP2A-208ENST00000601220 DDX54Q8TDD1 881 aaKnown RBP25.25■■□□□ 1.63
CHMP2A-208ENST00000601220 ATF5Q9Y2D1 282 aaPredicted RBP25.25■■□□□ 1.63
CHMP2A-208ENST00000601220 SGIP1Q9BQI5 828 aa25.24■■□□□ 1.63
CHMP2A-208ENST00000601220 PAPPAQ13219 1627 aa25.23■■□□□ 1.63
CHMP2A-208ENST00000601220 RRS1Q15050 365 aaKnown RBP25.23■■□□□ 1.63
CHMP2A-208ENST00000601220 GGNBP2Q9H3C7 697 aa25.23■■□□□ 1.63
CHMP2A-208ENST00000601220 FAM208AQ9UK61 1670 aaKnown RBP25.22■■□□□ 1.63
CHMP2A-208ENST00000601220 RTL1A6NKG5 1358 aa25.21■■□□□ 1.63
CHMP2A-208ENST00000601220 ZNF827Q17R98 1081 aa25.21■■□□□ 1.63
CHMP2A-208ENST00000601220 MTFR1LQ9H019 292 aa25.21■■□□□ 1.63
CHMP2A-208ENST00000601220 BTAF1O14981 1849 aa25.21■■□□□ 1.63
CHMP2A-208ENST00000601220 NBPF6Q5VWK0 638 aa25.2■■□□□ 1.62
CHMP2A-208ENST00000601220 NBPF4Q96M43 638 aa25.2■■□□□ 1.62
CHMP2A-208ENST00000601220 MEGF6O75095 1541 aa25.19■■□□□ 1.62
CHMP2A-208ENST00000601220 ZCRB1Q8TBF4 217 aaKnown RBP25.18■■□□□ 1.62
CHMP2A-208ENST00000601220 AKT1S1Q96B36 256 aa25.18■■□□□ 1.62
CHMP2A-208ENST00000601220 CARD14Q9BXL6 1004 aa25.18■■□□□ 1.62
CHMP2A-208ENST00000601220 NSD2O96028 1365 aa25.18■■□□□ 1.62
CHMP2A-208ENST00000601220 MYOM1P52179 1685 aa25.17■■□□□ 1.62
CHMP2A-208ENST00000601220 YY1P25490 414 aa25.17■■□□□ 1.62
CHMP2A-208ENST00000601220 PRIM1P49642 420 aaKnown RBP25.17■■□□□ 1.62
CHMP2A-208ENST00000601220 SLC27A3Q5K4L6 730 aa25.16■■□□□ 1.62
CHMP2A-208ENST00000601220 CDCA8Q53HL2 280 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms