RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 AKAP12Q02952 1782 aa21.65■■□□□ 1.06
XRCC1-209ENST00000599693 TOM1L2Q6ZVM7 507 aa21.64■■□□□ 1.05
XRCC1-209ENST00000599693 WDR17Q8IZU2 1322 aa21.63■■□□□ 1.05
XRCC1-209ENST00000599693 BCL11BQ9C0K0 894 aaPredicted RBP21.63■■□□□ 1.05
XRCC1-209ENST00000599693 ANO8Q9HCE9 1232 aaPredicted RBP21.63■■□□□ 1.05
XRCC1-209ENST00000599693 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
XRCC1-209ENST00000599693 BCL9O00512 1426 aa21.62■■□□□ 1.05
XRCC1-209ENST00000599693 DCAF8L1A6NGE4 600 aa21.61■■□□□ 1.05
XRCC1-209ENST00000599693 TRPM1Q7Z4N2 1603 aa21.61■■□□□ 1.05
XRCC1-209ENST00000599693 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
XRCC1-209ENST00000599693 AXIN2Q9Y2T1 843 aa21.6■■□□□ 1.05
XRCC1-209ENST00000599693 RGPD5Q99666 1765 aa21.59■■□□□ 1.05
XRCC1-209ENST00000599693 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
XRCC1-209ENST00000599693 CDCA7Q9BWT1 371 aaPredicted RBP21.59■■□□□ 1.05
XRCC1-209ENST00000599693 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
XRCC1-209ENST00000599693 MYOM1P52179 1685 aa21.56■■□□□ 1.04
XRCC1-209ENST00000599693 ARHGEF25Q86VW2 580 aa21.56■■□□□ 1.04
XRCC1-209ENST00000599693 PROM2Q8N271 834 aa21.56■■□□□ 1.04
XRCC1-209ENST00000599693 NFAT5O94916 1531 aa21.55■■□□□ 1.04
XRCC1-209ENST00000599693 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
XRCC1-209ENST00000599693 CARD10Q9BWT7 1032 aa21.55■■□□□ 1.04
XRCC1-209ENST00000599693 TTC21BQ7Z4L5 1316 aa21.55■■□□□ 1.04
XRCC1-209ENST00000599693 PDGFDQ9GZP0 370 aaPredicted RBP21.54■■□□□ 1.04
XRCC1-209ENST00000599693 ABCC6O95255 1503 aa21.54■■□□□ 1.04
XRCC1-209ENST00000599693 ZNF692Q9BU19 519 aaPredicted RBP21.53■■□□□ 1.04
XRCC1-209ENST00000599693 TTC21AQ8NDW8 1320 aa21.53■■□□□ 1.04
XRCC1-209ENST00000599693 ZBTB7AO95365 584 aa21.52■■□□□ 1.04
XRCC1-209ENST00000599693 CSB-PGBD3P0DP91 1061 aa21.52■■□□□ 1.04
XRCC1-209ENST00000599693 TNS2Q63HR2 1409 aa21.52■■□□□ 1.04
XRCC1-209ENST00000599693 CCDC7Q96M83 1385 aa21.51■■□□□ 1.03
XRCC1-209ENST00000599693 SOX12O15370 315 aa21.51■■□□□ 1.03
XRCC1-209ENST00000599693 NHSQ6T4R5 1651 aa21.5■■□□□ 1.03
XRCC1-209ENST00000599693 PTGER2P43116 358 aa21.5■■□□□ 1.03
XRCC1-209ENST00000599693 TXNRD1Q16881 649 aa21.5■■□□□ 1.03
XRCC1-209ENST00000599693 STK32BQ9NY57 414 aa21.5■■□□□ 1.03
XRCC1-209ENST00000599693 EXOC5O00471 708 aa21.49■■□□□ 1.03
XRCC1-209ENST00000599693 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
XRCC1-209ENST00000599693 MON2Q7Z3U7 1717 aa21.49■■□□□ 1.03
XRCC1-209ENST00000599693 SLC15A2Q16348 729 aa21.47■■□□□ 1.03
XRCC1-209ENST00000599693 ATF5Q9Y2D1 282 aaPredicted RBP21.47■■□□□ 1.03
XRCC1-209ENST00000599693 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
XRCC1-209ENST00000599693 USP54Q70EL1 1684 aa21.47■■□□□ 1.03
XRCC1-209ENST00000599693 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
XRCC1-209ENST00000599693 UTRNP46939 3433 aa21.45■■□□□ 1.02
XRCC1-209ENST00000599693 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
XRCC1-209ENST00000599693 MTFR1LQ9H019 292 aa21.43■■□□□ 1.02
XRCC1-209ENST00000599693 LTN1O94822 1766 aa21.42■■□□□ 1.02
XRCC1-209ENST00000599693 ERBB3P21860 1342 aa21.42■■□□□ 1.02
XRCC1-209ENST00000599693 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
XRCC1-209ENST00000599693 FHDC1Q9C0D6 1143 aaPredicted RBP21.42■■□□□ 1.02
XRCC1-209ENST00000599693 BTAF1O14981 1849 aa21.41■■□□□ 1.02
XRCC1-209ENST00000599693 SGIP1Q9BQI5 828 aa21.41■■□□□ 1.02
XRCC1-209ENST00000599693 SYT17Q9BSW7 474 aa21.41■■□□□ 1.02
XRCC1-209ENST00000599693 ACSBG1Q96GR2 724 aa21.39■■□□□ 1.01
XRCC1-209ENST00000599693 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
XRCC1-209ENST00000599693 CHD4Q14839 1912 aa21.38■■□□□ 1.01
XRCC1-209ENST00000599693 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.38■■□□□ 1.01
XRCC1-209ENST00000599693 ZNF784Q8NCA9 323 aaPredicted RBP21.38■■□□□ 1.01
XRCC1-209ENST00000599693 NLRP2Q9NX02 1062 aa21.38■■□□□ 1.01
XRCC1-209ENST00000599693 CD163L1Q9NR16 1453 aa21.38■■□□□ 1.01
XRCC1-209ENST00000599693 IL2RBP14784 551 aa21.37■■□□□ 1.01
XRCC1-209ENST00000599693 SIN3AQ96ST3 1273 aa21.36■■□□□ 1.01
XRCC1-209ENST00000599693 MAP3K5Q99683 1374 aa21.36■■□□□ 1.01
XRCC1-209ENST00000599693 NME9Q86XW9 330 aa21.35■■□□□ 1.01
XRCC1-209ENST00000599693 ARXQ96QS3 562 aa21.34■■□□□ 1.01
XRCC1-209ENST00000599693 QSER1Q2KHR3 1735 aa21.33■■□□□ 1.01
XRCC1-209ENST00000599693 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
XRCC1-209ENST00000599693 EDC4Q6P2E9 1401 aaKnown RBP21.32■■□□□ 1
XRCC1-209ENST00000599693 ZNF827Q17R98 1081 aa21.32■■□□□ 1
XRCC1-209ENST00000599693 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
XRCC1-209ENST00000599693 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
XRCC1-209ENST00000599693 NEUROD1Q13562 356 aa21.31■■□□□ 1
XRCC1-209ENST00000599693 HDGFL2Q7Z4V5 671 aaPredicted RBP21.3■■□□□ 1
XRCC1-209ENST00000599693 LRRC4BQ9NT99 713 aa21.3■■□□□ 1
XRCC1-209ENST00000599693 TMC1Q8TDI8 760 aa21.29■■□□□ 1
XRCC1-209ENST00000599693 COL24A1Q17RW2 1714 aa21.28■■□□□ 1
XRCC1-209ENST00000599693 A0A1W2PP64 1363 aa21.26■□□□□ 0.99
XRCC1-209ENST00000599693 SLC27A3Q5K4L6 730 aa21.26■□□□□ 0.99
XRCC1-209ENST00000599693 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
XRCC1-209ENST00000599693 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
XRCC1-209ENST00000599693 TUBGCP6Q96RT7 1819 aa21.26■□□□□ 0.99
XRCC1-209ENST00000599693 SLC16A10Q8TF71 515 aa21.25■□□□□ 0.99
XRCC1-209ENST00000599693 CARD11Q9BXL7 1154 aa21.25■□□□□ 0.99
XRCC1-209ENST00000599693 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
XRCC1-209ENST00000599693 DOT1LQ8TEK3 1739 aa21.24■□□□□ 0.99
XRCC1-209ENST00000599693 IP6K1Q92551 441 aa21.24■□□□□ 0.99
XRCC1-209ENST00000599693 TERF2IPQ9NYB0 399 aa21.24■□□□□ 0.99
XRCC1-209ENST00000599693 DDX54Q8TDD1 881 aaKnown RBP21.23■□□□□ 0.99
XRCC1-209ENST00000599693 LY75O60449 1722 aa21.23■□□□□ 0.99
XRCC1-209ENST00000599693 GPR162Q16538 588 aa21.22■□□□□ 0.99
XRCC1-209ENST00000599693 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
XRCC1-209ENST00000599693 SHANK3Q9BYB0 1731 aa21.21■□□□□ 0.99
XRCC1-209ENST00000599693 POLD1P28340 1107 aa21.21■□□□□ 0.99
XRCC1-209ENST00000599693 C1QTNF8P60827 252 aa21.21■□□□□ 0.99
XRCC1-209ENST00000599693 ANKRD36BQ8N2N9 1353 aa21.21■□□□□ 0.99
XRCC1-209ENST00000599693 SENP3-EIF4A1A0A087X0R7 540 aa21.2■□□□□ 0.98
XRCC1-209ENST00000599693 KLHL34Q8N239 644 aa21.2■□□□□ 0.98
XRCC1-209ENST00000599693 LTV1Q96GA3 475 aaPredicted RBP21.2■□□□□ 0.98
XRCC1-209ENST00000599693 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
XRCC1-209ENST00000599693 NSD2O96028 1365 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms