RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 ABCC6O95255 1503 aa12.97□□□□□ -0.33
FARP1-226ENST00000599040 TRIM37O94972 964 aa12.96□□□□□ -0.33
FARP1-226ENST00000599040 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
FARP1-226ENST00000599040 TMC1Q8TDI8 760 aa12.96□□□□□ -0.33
FARP1-226ENST00000599040 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
FARP1-226ENST00000599040 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
FARP1-226ENST00000599040 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
FARP1-226ENST00000599040 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
FARP1-226ENST00000599040 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
FARP1-226ENST00000599040 ARHGEF25Q86VW2 580 aa12.95□□□□□ -0.34
FARP1-226ENST00000599040 SOX12O15370 315 aa12.94□□□□□ -0.34
FARP1-226ENST00000599040 CSB-PGBD3P0DP91 1061 aa12.94□□□□□ -0.34
FARP1-226ENST00000599040 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
FARP1-226ENST00000599040 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
FARP1-226ENST00000599040 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
FARP1-226ENST00000599040 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
FARP1-226ENST00000599040 EDC4Q6P2E9 1401 aaKnown RBP12.94□□□□□ -0.34
FARP1-226ENST00000599040 COL18A1P39060 1754 aa12.94□□□□□ -0.34
FARP1-226ENST00000599040 APBA3O96018 575 aa12.93□□□□□ -0.34
FARP1-226ENST00000599040 DDB1Q16531 1140 aa12.93□□□□□ -0.34
FARP1-226ENST00000599040 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.343e-6■□□□□ 9.4
FARP1-226ENST00000599040 USP31Q70CQ4 1352 aa12.93□□□□□ -0.34
FARP1-226ENST00000599040 USP47Q96K76 1375 aa12.93□□□□□ -0.34
FARP1-226ENST00000599040 NFAT5O94916 1531 aa12.93□□□□□ -0.34
FARP1-226ENST00000599040 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
FARP1-226ENST00000599040 LRP5O75197 1615 aa12.92□□□□□ -0.34
FARP1-226ENST00000599040 CARD10Q9BWT7 1032 aa12.92□□□□□ -0.34
FARP1-226ENST00000599040 WNK3Q9BYP7 1800 aa12.91□□□□□ -0.34
FARP1-226ENST00000599040 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
FARP1-226ENST00000599040 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
FARP1-226ENST00000599040 CCDC7Q96M83 1385 aa12.91□□□□□ -0.34
FARP1-226ENST00000599040 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
FARP1-226ENST00000599040 CD163L1Q9NR16 1453 aa12.91□□□□□ -0.34
FARP1-226ENST00000599040 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-226ENST00000599040 CAMKK2Q96RR4 588 aa12.9□□□□□ -0.34
FARP1-226ENST00000599040 SLC12A5Q9H2X9 1139 aa12.9□□□□□ -0.34
FARP1-226ENST00000599040 A0A1W2PP64 1363 aa12.9□□□□□ -0.34
FARP1-226ENST00000599040 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
FARP1-226ENST00000599040 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
FARP1-226ENST00000599040 NBPF14Q5TI25 921 aa12.89□□□□□ -0.35
FARP1-226ENST00000599040 NME9Q86XW9 330 aa12.89□□□□□ -0.35
FARP1-226ENST00000599040 TMF1P82094 1093 aa12.88□□□□□ -0.35
FARP1-226ENST00000599040 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
FARP1-226ENST00000599040 CDCA8Q53HL2 280 aa12.88□□□□□ -0.35
FARP1-226ENST00000599040 RREB1Q92766 1687 aa12.88□□□□□ -0.35
FARP1-226ENST00000599040 LTN1O94822 1766 aa12.88□□□□□ -0.35
FARP1-226ENST00000599040 RGPD3A6NKT7 1758 aaPredicted RBP12.87□□□□□ -0.35
FARP1-226ENST00000599040 RGPD4Q7Z3J3 1758 aa12.87□□□□□ -0.35
FARP1-226ENST00000599040 EXOC5O00471 708 aa12.87□□□□□ -0.35
FARP1-226ENST00000599040 TESK2Q96S53 571 aa12.87□□□□□ -0.35
FARP1-226ENST00000599040 PEAK1Q9H792 1746 aa12.87□□□□□ -0.35
FARP1-226ENST00000599040 BCL9O00512 1426 aa12.87□□□□□ -0.35
FARP1-226ENST00000599040 ERBB3P21860 1342 aa12.87□□□□□ -0.35
FARP1-226ENST00000599040 COG3Q96JB2 828 aa12.86□□□□□ -0.35
FARP1-226ENST00000599040 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
FARP1-226ENST00000599040 SBF2Q86WG5 1849 aa12.85□□□□□ -0.35
FARP1-226ENST00000599040 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
FARP1-226ENST00000599040 ANKRD36BQ8N2N9 1353 aa12.85□□□□□ -0.35
FARP1-226ENST00000599040 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
FARP1-226ENST00000599040 TNS2Q63HR2 1409 aa12.85□□□□□ -0.35
FARP1-226ENST00000599040 FAM208AQ9UK61 1670 aaKnown RBP12.84□□□□□ -0.35
FARP1-226ENST00000599040 PLSCR1O15162 318 aa12.84□□□□□ -0.35
FARP1-226ENST00000599040 MARCH10Q8NA82 808 aaPredicted RBP12.83□□□□□ -0.36
FARP1-226ENST00000599040 ANKRD24Q8TF21 1146 aa12.83□□□□□ -0.36
FARP1-226ENST00000599040 IL2RBP14784 551 aa12.82□□□□□ -0.36
FARP1-226ENST00000599040 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
FARP1-226ENST00000599040 IP6K1Q92551 441 aa12.82□□□□□ -0.36
FARP1-226ENST00000599040 AMPHP49418 695 aa12.8□□□□□ -0.36
FARP1-226ENST00000599040 RTL1A6NKG5 1358 aa12.8□□□□□ -0.36
FARP1-226ENST00000599040 ANP32CO43423 234 aa12.79□□□□□ -0.36
FARP1-226ENST00000599040 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
FARP1-226ENST00000599040 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
FARP1-226ENST00000599040 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
FARP1-226ENST00000599040 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
FARP1-226ENST00000599040 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
FARP1-226ENST00000599040 HOXC9P31274 260 aa12.77□□□□□ -0.37
FARP1-226ENST00000599040 LTV1Q96GA3 475 aaPredicted RBP12.77□□□□□ -0.37
FARP1-226ENST00000599040 SPON1Q9HCB6 807 aa12.77□□□□□ -0.37
FARP1-226ENST00000599040 KIF7Q2M1P5 1343 aa12.77□□□□□ -0.37
FARP1-226ENST00000599040 MAP3K19Q56UN5 1328 aa12.77□□□□□ -0.37
FARP1-226ENST00000599040 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
FARP1-226ENST00000599040 PPP1R1BQ9UD71 204 aaPredicted RBP12.76□□□□□ -0.37
FARP1-226ENST00000599040 FYB1O15117 783 aa12.75□□□□□ -0.37
FARP1-226ENST00000599040 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
FARP1-226ENST00000599040 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
FARP1-226ENST00000599040 STK32BQ9NY57 414 aa12.75□□□□□ -0.37
FARP1-226ENST00000599040 KCNQ2O43526 872 aa12.74□□□□□ -0.37
FARP1-226ENST00000599040 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
FARP1-226ENST00000599040 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
FARP1-226ENST00000599040 CGNL1Q0VF96 1302 aa12.73□□□□□ -0.37
FARP1-226ENST00000599040 PTF1AQ7RTS3 328 aa12.73□□□□□ -0.37
FARP1-226ENST00000599040 FLT4P35916 1363 aa12.72□□□□□ -0.37
FARP1-226ENST00000599040 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
FARP1-226ENST00000599040 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
FARP1-226ENST00000599040 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
FARP1-226ENST00000599040 ANO8Q9HCE9 1232 aaPredicted RBP12.72□□□□□ -0.37
FARP1-226ENST00000599040 MYOM1P52179 1685 aa12.72□□□□□ -0.37
FARP1-226ENST00000599040 BTAF1O14981 1849 aa12.72□□□□□ -0.37
FARP1-226ENST00000599040 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.37
FARP1-226ENST00000599040 SLC15A2Q16348 729 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms