RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TOM1L2Q6ZVM7 507 aa19.34■□□□□ 0.69
SCAF1-203ENST00000598359 PUS7Q96PZ0 661 aaKnown RBP19.34■□□□□ 0.69
SCAF1-203ENST00000598359 USP31Q70CQ4 1352 aa19.33■□□□□ 0.69
SCAF1-203ENST00000598359 PDE3BQ13370 1112 aa19.33■□□□□ 0.68
SCAF1-203ENST00000598359 RGPD5Q99666 1765 aa19.33■□□□□ 0.68
SCAF1-203ENST00000598359 RGPD1P0DJD0 1748 aa19.32■□□□□ 0.68
SCAF1-203ENST00000598359 THRAP3Q9Y2W1 955 aaKnown RBP19.32■□□□□ 0.68
SCAF1-203ENST00000598359 WDR17Q8IZU2 1322 aa19.31■□□□□ 0.68
SCAF1-203ENST00000598359 CLSPNQ9HAW4 1339 aa19.31■□□□□ 0.68
SCAF1-203ENST00000598359 TRIM37O94972 964 aa19.31■□□□□ 0.68
SCAF1-203ENST00000598359 CSB-PGBD3P0DP91 1061 aa19.31■□□□□ 0.68
SCAF1-203ENST00000598359 EN1Q05925 392 aaPredicted RBP19.31■□□□□ 0.68
SCAF1-203ENST00000598359 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
SCAF1-203ENST00000598359 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
SCAF1-203ENST00000598359 TNS1Q9HBL0 1735 aaKnown RBP19.29■□□□□ 0.68
SCAF1-203ENST00000598359 TMF1P82094 1093 aa19.29■□□□□ 0.68
SCAF1-203ENST00000598359 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
SCAF1-203ENST00000598359 TIMELESSQ9UNS1 1208 aa19.29■□□□□ 0.68
SCAF1-203ENST00000598359 PARP4Q9UKK3 1724 aaKnown RBP19.28■□□□□ 0.68
SCAF1-203ENST00000598359 OVOS2A0A0J9YW53 1432 aa19.28■□□□□ 0.68
SCAF1-203ENST00000598359 OVOS2Q6IE36 1432 aa19.28■□□□□ 0.68
SCAF1-203ENST00000598359 R3HDM1Q15032 1099 aaKnown RBP19.28■□□□□ 0.68
SCAF1-203ENST00000598359 NINLQ9Y2I6 1382 aa19.28■□□□□ 0.68
SCAF1-203ENST00000598359 LRRC37A3O60309 1634 aa19.26■□□□□ 0.67
SCAF1-203ENST00000598359 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
SCAF1-203ENST00000598359 YY1P25490 414 aa19.26■□□□□ 0.67
SCAF1-203ENST00000598359 LTN1O94822 1766 aa19.26■□□□□ 0.67
SCAF1-203ENST00000598359 ANKRD36BQ8N2N9 1353 aa19.25■□□□□ 0.67
SCAF1-203ENST00000598359 FBLN1P23142 703 aa19.25■□□□□ 0.67
SCAF1-203ENST00000598359 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
SCAF1-203ENST00000598359 CARD10Q9BWT7 1032 aa19.25■□□□□ 0.67
SCAF1-203ENST00000598359 WNK3Q9BYP7 1800 aa19.24■□□□□ 0.67
SCAF1-203ENST00000598359 APBA3O96018 575 aa19.24■□□□□ 0.67
SCAF1-203ENST00000598359 DDB1Q16531 1140 aa19.24■□□□□ 0.67
SCAF1-203ENST00000598359 ABCC6O95255 1503 aa19.23■□□□□ 0.67
SCAF1-203ENST00000598359 ANKRD24Q8TF21 1146 aa19.22■□□□□ 0.67
SCAF1-203ENST00000598359 COG3Q96JB2 828 aa19.22■□□□□ 0.67
SCAF1-203ENST00000598359 NLRP2Q9NX02 1062 aa19.22■□□□□ 0.67
SCAF1-203ENST00000598359 DISP2A7MBM2 1401 aa19.22■□□□□ 0.67
SCAF1-203ENST00000598359 ERBB3P21860 1342 aa19.22■□□□□ 0.67
SCAF1-203ENST00000598359 MARCH10Q8NA82 808 aaPredicted RBP19.21■□□□□ 0.67
SCAF1-203ENST00000598359 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
SCAF1-203ENST00000598359 PEAK1Q9H792 1746 aa19.21■□□□□ 0.67
SCAF1-203ENST00000598359 OVOS2A0A0G2JMS6 1433 aa19.2■□□□□ 0.66
SCAF1-203ENST00000598359 GGNBP2Q9H3C7 697 aa19.2■□□□□ 0.66
SCAF1-203ENST00000598359 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
SCAF1-203ENST00000598359 LTV1Q96GA3 475 aaPredicted RBP19.19■□□□□ 0.66
SCAF1-203ENST00000598359 MYOM1P52179 1685 aa19.19■□□□□ 0.66
SCAF1-203ENST00000598359 CCDC7Q96M83 1385 aa19.19■□□□□ 0.66
SCAF1-203ENST00000598359 FYB1O15117 783 aa19.18■□□□□ 0.66
SCAF1-203ENST00000598359 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
SCAF1-203ENST00000598359 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
SCAF1-203ENST00000598359 IP6K1Q92551 441 aa19.17■□□□□ 0.66
SCAF1-203ENST00000598359 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
SCAF1-203ENST00000598359 CDCA7Q9BWT1 371 aaPredicted RBP19.17■□□□□ 0.66
SCAF1-203ENST00000598359 CARD14Q9BXL6 1004 aa19.17■□□□□ 0.66
SCAF1-203ENST00000598359 RRS1Q15050 365 aaKnown RBP19.16■□□□□ 0.66
SCAF1-203ENST00000598359 EXOC5O00471 708 aa19.15■□□□□ 0.66
SCAF1-203ENST00000598359 HSPA5P11021 654 aaKnown RBP19.14■□□□□ 0.65
SCAF1-203ENST00000598359 HOXC9P31274 260 aa19.14■□□□□ 0.65
SCAF1-203ENST00000598359 AMPHP49418 695 aa19.14■□□□□ 0.65
SCAF1-203ENST00000598359 TNS2Q63HR2 1409 aa19.14■□□□□ 0.65
SCAF1-203ENST00000598359 NSD3Q9BZ95 1437 aa19.14■□□□□ 0.65
SCAF1-203ENST00000598359 SBF2Q86WG5 1849 aa19.13■□□□□ 0.65
SCAF1-203ENST00000598359 KIF20BQ96Q89 1820 aa19.12■□□□□ 0.65
SCAF1-203ENST00000598359 RREB1Q92766 1687 aa19.12■□□□□ 0.65
SCAF1-203ENST00000598359 IL2RBP14784 551 aa19.12■□□□□ 0.65
SCAF1-203ENST00000598359 PARD3Q8TEW0 1356 aa19.11■□□□□ 0.65
SCAF1-203ENST00000598359 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.65
SCAF1-203ENST00000598359 NUP188Q5SRE5 1749 aa19.11■□□□□ 0.65
SCAF1-203ENST00000598359 C11orf95C9JLR9 678 aaPredicted RBP19.1■□□□□ 0.65
SCAF1-203ENST00000598359 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
SCAF1-203ENST00000598359 KCNQ2O43526 872 aa19.09■□□□□ 0.65
SCAF1-203ENST00000598359 ACSBG1Q96GR2 724 aa19.09■□□□□ 0.65
SCAF1-203ENST00000598359 RGPD2P0DJD1 1756 aa19.08■□□□□ 0.64
SCAF1-203ENST00000598359 BCL9O00512 1426 aa19.08■□□□□ 0.64
SCAF1-203ENST00000598359 DCAF8L1A6NGE4 600 aa19.07■□□□□ 0.64
SCAF1-203ENST00000598359 RTL1A6NKG5 1358 aa19.06■□□□□ 0.64
SCAF1-203ENST00000598359 FAM208AQ9UK61 1670 aaKnown RBP19.06■□□□□ 0.64
SCAF1-203ENST00000598359 USHBP1Q8N6Y0 703 aa19.06■□□□□ 0.64
SCAF1-203ENST00000598359 HSP90AB2PQ58FF8 381 aa19.05■□□□□ 0.64
SCAF1-203ENST00000598359 DDX54Q8TDD1 881 aaKnown RBP19.05■□□□□ 0.64
SCAF1-203ENST00000598359 EMILIN1Q9Y6C2 1016 aa19.05■□□□□ 0.64
SCAF1-203ENST00000598359 PLSCR1O15162 318 aa19.04■□□□□ 0.64
SCAF1-203ENST00000598359 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
SCAF1-203ENST00000598359 PROM2Q8N271 834 aa19.04■□□□□ 0.64
SCAF1-203ENST00000598359 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
SCAF1-203ENST00000598359 PPP1R1BQ9UD71 204 aaPredicted RBP19.04■□□□□ 0.64
SCAF1-203ENST00000598359 NBPF14Q5TI25 921 aa19.03■□□□□ 0.64
SCAF1-203ENST00000598359 MEGF6O75095 1541 aa19.03■□□□□ 0.64
SCAF1-203ENST00000598359 ANO8Q9HCE9 1232 aaPredicted RBP19.02■□□□□ 0.64
SCAF1-203ENST00000598359 NHSQ6T4R5 1651 aa19.01■□□□□ 0.63
SCAF1-203ENST00000598359 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
SCAF1-203ENST00000598359 RGPD3A6NKT7 1758 aaPredicted RBP19.01■□□□□ 0.63
SCAF1-203ENST00000598359 RGPD4Q7Z3J3 1758 aa19.01■□□□□ 0.63
SCAF1-203ENST00000598359 PPM1GO15355 546 aaPredicted RBP19.01■□□□□ 0.63
SCAF1-203ENST00000598359 SPON1Q9HCB6 807 aa19.01■□□□□ 0.63
SCAF1-203ENST00000598359 INSRP06213 1382 aa19.01■□□□□ 0.63
SCAF1-203ENST00000598359 FLT4P35916 1363 aa19.01■□□□□ 0.63
SCAF1-203ENST00000598359 UTRNP46939 3433 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms