RNA–Protein interactions for RNA: ENST00000596580.2

FARP1-219, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 13,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-219ENST00000596580 CAMSAP2Q08AD1 1489 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 FAM13BQ9NYF5 915 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 PHAXQ9H814 394 aaKnown RBP9.49□□□□□ -0.89
FARP1-219ENST00000596580 CYP46A1Q9Y6A2 500 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 RALGAPBQ86X10 1494 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 NOL7Q9UMY1 257 aaKnown RBP9.49□□□□□ -0.89
FARP1-219ENST00000596580 SPG7Q9UQ90 795 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 CFAP43Q8NDM7 1665 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 KRT85P78386 507 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 TRIM5Q9C035 493 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 LEKR1Q6ZMV7 388 aa9.49□□□□□ -0.89
FARP1-219ENST00000596580 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
FARP1-219ENST00000596580 SMC2O95347 1197 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 ALDH1L2Q3SY69 923 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 LRRCC1Q9C099 1032 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 WASHC4Q2M389 1173 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 USP8P40818 1118 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
FARP1-219ENST00000596580 TCP11L2Q8N4U5 519 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 FOXD4L1Q9NU39 408 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 PPP2R1AP30153 589 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
FARP1-219ENST00000596580 ABTB2Q8N961 1025 aa9.48□□□□□ -0.89
FARP1-219ENST00000596580 BMP2KQ9NSY1 1161 aaPredicted RBP9.48□□□□□ -0.89
FARP1-219ENST00000596580 PPP1R12BO60237 982 aaPredicted RBP9.48□□□□□ -0.89
FARP1-219ENST00000596580 MTHFSP49914 203 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 KCNH5Q8NCM2 988 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 CCDC57Q2TAC2 916 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 TWISTNBQ3B726 338 aaPredicted RBP9.47□□□□□ -0.89
FARP1-219ENST00000596580 NLRP6P59044 892 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 PYM1Q9BRP8 204 aaKnown RBP9.47□□□□□ -0.89
FARP1-219ENST00000596580 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
FARP1-219ENST00000596580 HMGB1P09429 215 aaKnown RBP9.47□□□□□ -0.89
FARP1-219ENST00000596580 CEP57L1Q8IYX8 460 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 INCENPQ9NQS7 918 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 HSP90AB2PQ58FF8 381 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 PPFIBP1Q86W92 1011 aa9.47□□□□□ -0.89
FARP1-219ENST00000596580 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.89
FARP1-219ENST00000596580 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.89
FARP1-219ENST00000596580 EZRP15311 586 aaKnown RBP9.46□□□□□ -0.89
FARP1-219ENST00000596580 FAM69CQ0P6D2 419 aa9.46□□□□□ -0.89
FARP1-219ENST00000596580 NLRP2Q9NX02 1062 aa9.46□□□□□ -0.89
FARP1-219ENST00000596580 CCDC196A0A1B0GTZ2 297 aa9.46□□□□□ -0.89
FARP1-219ENST00000596580 H0YHG0 523 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 ATF7IPQ6VMQ6 1270 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 WDR97A6NE52 1622 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 LNPKQ9C0E8 428 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 CTAGE5O15320 804 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 PLIN1O60240 522 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 SURF6O75683 361 aaKnown RBP9.46□□□□□ -0.9
FARP1-219ENST00000596580 NFKBIBQ15653 356 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 CNKSR2Q8WXI2 1034 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 NEUROD6Q96NK8 337 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 HDGFL1Q5TGJ6 251 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 U3KPZ7 1027 aaPredicted RBP9.46□□□□□ -0.9
FARP1-219ENST00000596580 RAPGEF6Q8TEU7 1601 aa9.46□□□□□ -0.9
FARP1-219ENST00000596580 ELL2O00472 640 aaPredicted RBP9.45□□□□□ -0.9
FARP1-219ENST00000596580 STK38Q15208 465 aa9.45□□□□□ -0.9
FARP1-219ENST00000596580 ADAMTS8Q9UP79 889 aa9.45□□□□□ -0.9
FARP1-219ENST00000596580 SMTNL1A8MU46 457 aa9.45□□□□□ -0.9
FARP1-219ENST00000596580 RPAP2Q8IXW5 612 aaPredicted RBP9.45□□□□□ -0.9
FARP1-219ENST00000596580 SYTL4Q96C24 671 aaPredicted RBP9.45□□□□□ -0.9
FARP1-219ENST00000596580 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
FARP1-219ENST00000596580 FOXD4L4Q8WXT5 416 aaPredicted RBP9.45□□□□□ -0.9
FARP1-219ENST00000596580 SCAND2PQ9GZW5 306 aaPredicted RBP9.45□□□□□ -0.9
FARP1-219ENST00000596580 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
FARP1-219ENST00000596580 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
FARP1-219ENST00000596580 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
FARP1-219ENST00000596580 MAP9Q49MG5 647 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
FARP1-219ENST00000596580 NEK4P51957 841 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
FARP1-219ENST00000596580 GBP3Q9H0R5 595 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 TTC21BQ7Z4L5 1316 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 IMMTQ16891 758 aaKnown RBP9.44□□□□□ -0.9
FARP1-219ENST00000596580 TRAK2O60296 914 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 NUP160Q12769 1436 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 KRI1Q8N9T8 703 aaKnown RBP9.44□□□□□ -0.9
FARP1-219ENST00000596580 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.44□□□□□ -0.9
FARP1-219ENST00000596580 RAB34Q9BZG1 259 aa9.44□□□□□ -0.9
FARP1-219ENST00000596580 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 PRKAR2BP31323 418 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 VPS36Q86VN1 386 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 TNMDQ9H2S6 317 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 KIF20AO95235 890 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 NEMFO60524 1076 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 ZNF397Q8NF99 534 aaPredicted RBP9.43□□□□□ -0.9
FARP1-219ENST00000596580 FAM107BQ9H098 131 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 CCDC69A6NI79 296 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 KIAA0754O94854 1291 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 DEF6Q9H4E7 631 aa9.43□□□□□ -0.9
FARP1-219ENST00000596580 NAIPQ13075 1403 aa9.42□□□□□ -0.9
FARP1-219ENST00000596580 TTC39AQ5SRH9 613 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms