RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 E9PSI1 815 aa19.54■□□□□ 0.72
GTF2F1-202ENST00000593678 PLEKHG5O94827 1062 aa19.54■□□□□ 0.72
GTF2F1-202ENST00000593678 GCP02774 474 aa19.54■□□□□ 0.72
GTF2F1-202ENST00000593678 HOXC9P31274 260 aa19.54■□□□□ 0.72
GTF2F1-202ENST00000593678 TNS3Q68CZ2 1445 aa19.53■□□□□ 0.72
GTF2F1-202ENST00000593678 ZBTB7CA1YPR0 619 aa19.53■□□□□ 0.72
GTF2F1-202ENST00000593678 DDX17Q92841 729 aaKnown RBP19.53■□□□□ 0.72
GTF2F1-202ENST00000593678 LTN1O94822 1766 aa19.53■□□□□ 0.72
GTF2F1-202ENST00000593678 ARHGEF10O15013 1369 aa19.53■□□□□ 0.72
GTF2F1-202ENST00000593678 ALS2Q96Q42 1657 aa19.52■□□□□ 0.72
GTF2F1-202ENST00000593678 SLIT3O75094 1523 aa19.52■□□□□ 0.72
GTF2F1-202ENST00000593678 NFAT5O94916 1531 aa19.52■□□□□ 0.72
GTF2F1-202ENST00000593678 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
GTF2F1-202ENST00000593678 USP19O94966 1318 aa19.52■□□□□ 0.71
GTF2F1-202ENST00000593678 SULT6B1Q6IMI4 303 aa19.51■□□□□ 0.71
GTF2F1-202ENST00000593678 WDR63Q8IWG1 891 aa19.51■□□□□ 0.71
GTF2F1-202ENST00000593678 PXDNQ92626 1479 aa19.51■□□□□ 0.71
GTF2F1-202ENST00000593678 RIPK4P57078 832 aa19.5■□□□□ 0.71
GTF2F1-202ENST00000593678 SLFN5Q08AF3 891 aa19.5■□□□□ 0.71
GTF2F1-202ENST00000593678 FKBP8Q14318 412 aa19.5■□□□□ 0.71
GTF2F1-202ENST00000593678 IP6K1Q92551 441 aa19.5■□□□□ 0.71
GTF2F1-202ENST00000593678 SPATA31A3Q5VYP0 1347 aa19.49■□□□□ 0.71
GTF2F1-202ENST00000593678 RCAN3Q9UKA8 241 aa19.48■□□□□ 0.71
GTF2F1-202ENST00000593678 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
GTF2F1-202ENST00000593678 LMOD3Q0VAK6 560 aa19.47■□□□□ 0.71
GTF2F1-202ENST00000593678 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
GTF2F1-202ENST00000593678 DUSP27Q5VZP5 1158 aa19.47■□□□□ 0.71
GTF2F1-202ENST00000593678 AEBP2Q6ZN18 517 aaPredicted RBP19.47■□□□□ 0.71
GTF2F1-202ENST00000593678 LTV1Q96GA3 475 aaPredicted RBP19.47■□□□□ 0.71
GTF2F1-202ENST00000593678 RGPD1P0DJD0 1748 aa19.47■□□□□ 0.71
GTF2F1-202ENST00000593678 ARHGEF25Q86VW2 580 aa19.46■□□□□ 0.71
GTF2F1-202ENST00000593678 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
GTF2F1-202ENST00000593678 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
GTF2F1-202ENST00000593678 IGSF1Q8N6C5 1336 aa19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 CALD1Q05682 793 aaKnown RBP19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 AEBP1Q8IUX7 1158 aa19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 PHACTR3Q96KR7 559 aa19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 EYA1Q99502 592 aa19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 SOS2Q07890 1332 aaPredicted RBP19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 LTBP4Q8N2S1 1624 aa19.45■□□□□ 0.7
GTF2F1-202ENST00000593678 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
GTF2F1-202ENST00000593678 TRMT2AQ8IZ69 625 aaKnown RBP19.43■□□□□ 0.7
GTF2F1-202ENST00000593678 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
GTF2F1-202ENST00000593678 ZC3H6P61129 1189 aaKnown RBP19.42■□□□□ 0.7
GTF2F1-202ENST00000593678 TRIM35Q9UPQ4 493 aa19.42■□□□□ 0.7
GTF2F1-202ENST00000593678 KDRP35968 1356 aa19.42■□□□□ 0.7
GTF2F1-202ENST00000593678 NHSL1Q5SYE7 1610 aa19.41■□□□□ 0.7
GTF2F1-202ENST00000593678 IL16Q14005 1332 aa19.41■□□□□ 0.7
GTF2F1-202ENST00000593678 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
GTF2F1-202ENST00000593678 CABLES1Q8TDN4 633 aa19.39■□□□□ 0.69
GTF2F1-202ENST00000593678 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
GTF2F1-202ENST00000593678 GAS2L2Q8NHY3 880 aa19.38■□□□□ 0.69
GTF2F1-202ENST00000593678 ANKRD24Q8TF21 1146 aa19.38■□□□□ 0.69
GTF2F1-202ENST00000593678 RNF123Q5XPI4 1314 aa19.37■□□□□ 0.69
GTF2F1-202ENST00000593678 ERICH6BQ5W0A0 696 aa19.37■□□□□ 0.69
GTF2F1-202ENST00000593678 ROBO1Q9Y6N7 1651 aa19.37■□□□□ 0.69
GTF2F1-202ENST00000593678 RRP1P56182 461 aaKnown RBP19.37■□□□□ 0.69
GTF2F1-202ENST00000593678 TOM1O60784 492 aa19.36■□□□□ 0.69
GTF2F1-202ENST00000593678 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
GTF2F1-202ENST00000593678 ABCC6O95255 1503 aa19.35■□□□□ 0.69
GTF2F1-202ENST00000593678 DLG5Q8TDM6 1919 aa19.35■□□□□ 0.69
GTF2F1-202ENST00000593678 RTF1Q92541 710 aaKnown RBP19.35■□□□□ 0.69
GTF2F1-202ENST00000593678 LRRC59Q96AG4 307 aaKnown RBP19.35■□□□□ 0.69
GTF2F1-202ENST00000593678 CPDO75976 1380 aa19.35■□□□□ 0.69
GTF2F1-202ENST00000593678 CRYBG1Q9Y4K1 1723 aa19.35■□□□□ 0.69
GTF2F1-202ENST00000593678 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
GTF2F1-202ENST00000593678 USHBP1Q8N6Y0 703 aa19.34■□□□□ 0.69
GTF2F1-202ENST00000593678 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
GTF2F1-202ENST00000593678 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
GTF2F1-202ENST00000593678 FANCIQ9NVI1 1328 aa19.33■□□□□ 0.69
GTF2F1-202ENST00000593678 CSB-PGBD3P0DP91 1061 aa19.33■□□□□ 0.68
GTF2F1-202ENST00000593678 GNAI1P63096 354 aa19.33■□□□□ 0.68
GTF2F1-202ENST00000593678 PRDM11Q9NQV5 511 aa19.33■□□□□ 0.68
GTF2F1-202ENST00000593678 AXIN2Q9Y2T1 843 aa19.33■□□□□ 0.68
GTF2F1-202ENST00000593678 KIAA0232Q92628 1395 aa19.33■□□□□ 0.68
GTF2F1-202ENST00000593678 ERBB3P21860 1342 aa19.32■□□□□ 0.68
GTF2F1-202ENST00000593678 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
GTF2F1-202ENST00000593678 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
GTF2F1-202ENST00000593678 TSR2Q969E8 191 aaKnown RBP19.31■□□□□ 0.68
GTF2F1-202ENST00000593678 IFT57Q9NWB7 429 aa19.31■□□□□ 0.68
GTF2F1-202ENST00000593678 AHDC1Q5TGY3 1603 aaPredicted RBP19.31■□□□□ 0.68
GTF2F1-202ENST00000593678 CHRNA2Q15822 529 aa19.31■□□□□ 0.68
GTF2F1-202ENST00000593678 RGPD5Q99666 1765 aa19.3■□□□□ 0.68
GTF2F1-202ENST00000593678 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
GTF2F1-202ENST00000593678 NLRP2Q9NX02 1062 aa19.3■□□□□ 0.68
GTF2F1-202ENST00000593678 FAM83GA6ND36 823 aa19.29■□□□□ 0.68
GTF2F1-202ENST00000593678 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 RGPD2P0DJD1 1756 aa19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 FAM208AQ9UK61 1670 aaKnown RBP19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 GNAT3A8MTJ3 354 aa19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 PLEKHO1Q53GL0 409 aaPredicted RBP19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
GTF2F1-202ENST00000593678 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
GTF2F1-202ENST00000593678 PIP4K2BP78356 416 aa19.27■□□□□ 0.68
GTF2F1-202ENST00000593678 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
GTF2F1-202ENST00000593678 MCM10Q7L590 875 aa19.27■□□□□ 0.68
GTF2F1-202ENST00000593678 ABCA3Q99758 1704 aa19.27■□□□□ 0.68
GTF2F1-202ENST00000593678 COL18A1P39060 1754 aa19.27■□□□□ 0.67
GTF2F1-202ENST00000593678 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms