RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 EZH2Q15910 746 aaKnown RBP26.75■■□□□ 1.87
CCDC43-205ENST00000592333 MON2Q7Z3U7 1717 aa26.74■■□□□ 1.87
CCDC43-205ENST00000592333 AXIN2Q9Y2T1 843 aa26.74■■□□□ 1.87
CCDC43-205ENST00000592333 ZBTB7CA1YPR0 619 aa26.73■■□□□ 1.87
CCDC43-205ENST00000592333 PSDA5PKW4 1024 aaPredicted RBP26.72■■□□□ 1.87
CCDC43-205ENST00000592333 DDB1Q16531 1140 aa26.72■■□□□ 1.87
CCDC43-205ENST00000592333 OVOS2A0A0G2JMS6 1433 aa26.72■■□□□ 1.87
CCDC43-205ENST00000592333 OVOS2A0A0J9YW53 1432 aa26.72■■□□□ 1.87
CCDC43-205ENST00000592333 OVOS2Q6IE36 1432 aa26.72■■□□□ 1.87
CCDC43-205ENST00000592333 NFAT5O94916 1531 aa26.71■■□□□ 1.87
CCDC43-205ENST00000592333 USP54Q70EL1 1684 aa26.71■■□□□ 1.87
CCDC43-205ENST00000592333 HDGFL2Q7Z4V5 671 aaPredicted RBP26.71■■□□□ 1.87
CCDC43-205ENST00000592333 CARD10Q9BWT7 1032 aa26.71■■□□□ 1.87
CCDC43-205ENST00000592333 BCL9O00512 1426 aa26.7■■□□□ 1.86
CCDC43-205ENST00000592333 CD163L1Q9NR16 1453 aa26.69■■□□□ 1.86
CCDC43-205ENST00000592333 TERF2IPQ9NYB0 399 aa26.69■■□□□ 1.86
CCDC43-205ENST00000592333 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
CCDC43-205ENST00000592333 NINLQ9Y2I6 1382 aa26.68■■□□□ 1.86
CCDC43-205ENST00000592333 PEAK1Q9H792 1746 aa26.68■■□□□ 1.86
CCDC43-205ENST00000592333 R3HDM1Q15032 1099 aaKnown RBP26.67■■□□□ 1.86
CCDC43-205ENST00000592333 LRRC37A3O60309 1634 aa26.67■■□□□ 1.86
CCDC43-205ENST00000592333 CCDC7Q96M83 1385 aa26.67■■□□□ 1.86
CCDC43-205ENST00000592333 RREB1Q92766 1687 aa26.66■■□□□ 1.86
CCDC43-205ENST00000592333 EDC4Q6P2E9 1401 aaKnown RBP26.66■■□□□ 1.86
CCDC43-205ENST00000592333 NBPF14Q5TI25 921 aa26.66■■□□□ 1.86
CCDC43-205ENST00000592333 PLSCR1O15162 318 aa26.65■■□□□ 1.86
CCDC43-205ENST00000592333 TMC1Q8TDI8 760 aa26.65■■□□□ 1.86
CCDC43-205ENST00000592333 WNK3Q9BYP7 1800 aa26.65■■□□□ 1.86
CCDC43-205ENST00000592333 CSB-PGBD3P0DP91 1061 aa26.64■■□□□ 1.86
CCDC43-205ENST00000592333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.63■■□□□ 1.85
CCDC43-205ENST00000592333 SLC12A5Q9H2X9 1139 aa26.63■■□□□ 1.85
CCDC43-205ENST00000592333 RGPD3A6NKT7 1758 aaPredicted RBP26.63■■□□□ 1.85
CCDC43-205ENST00000592333 RGPD4Q7Z3J3 1758 aa26.63■■□□□ 1.85
CCDC43-205ENST00000592333 SOX12O15370 315 aa26.62■■□□□ 1.85
CCDC43-205ENST00000592333 BCL11BQ9C0K0 894 aaPredicted RBP26.62■■□□□ 1.85
CCDC43-205ENST00000592333 TESK2Q96S53 571 aa26.61■■□□□ 1.85
CCDC43-205ENST00000592333 RGPD5Q99666 1765 aa26.61■■□□□ 1.85
CCDC43-205ENST00000592333 EXOC5O00471 708 aa26.6■■□□□ 1.85
CCDC43-205ENST00000592333 NME9Q86XW9 330 aa26.6■■□□□ 1.85
CCDC43-205ENST00000592333 A0A1W2PP64 1363 aa26.59■■□□□ 1.85
CCDC43-205ENST00000592333 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
CCDC43-205ENST00000592333 SBF2Q86WG5 1849 aa26.59■■□□□ 1.85
CCDC43-205ENST00000592333 MARCH10Q8NA82 808 aaPredicted RBP26.58■■□□□ 1.85
CCDC43-205ENST00000592333 ERBB3P21860 1342 aa26.58■■□□□ 1.85
CCDC43-205ENST00000592333 ST20-MTHFSA0A0A6YYL1 179 aa26.57■■□□□ 1.84
CCDC43-205ENST00000592333 TNS2Q63HR2 1409 aa26.53■■□□□ 1.84
CCDC43-205ENST00000592333 LTN1O94822 1766 aa26.52■■□□□ 1.84
CCDC43-205ENST00000592333 TIMELESSQ9UNS1 1208 aa26.51■■□□□ 1.83
CCDC43-205ENST00000592333 NLRP2Q9NX02 1062 aa26.5■■□□□ 1.83
CCDC43-205ENST00000592333 IL2RBP14784 551 aa26.49■■□□□ 1.83
CCDC43-205ENST00000592333 ANKRD24Q8TF21 1146 aa26.49■■□□□ 1.83
CCDC43-205ENST00000592333 IP6K1Q92551 441 aa26.49■■□□□ 1.83
CCDC43-205ENST00000592333 ANKRD36BQ8N2N9 1353 aa26.48■■□□□ 1.83
CCDC43-205ENST00000592333 TMF1P82094 1093 aa26.48■■□□□ 1.83
CCDC43-205ENST00000592333 COG3Q96JB2 828 aa26.47■■□□□ 1.83
CCDC43-205ENST00000592333 CDCA8Q53HL2 280 aa26.46■■□□□ 1.83
CCDC43-205ENST00000592333 SPON1Q9HCB6 807 aa26.45■■□□□ 1.82
CCDC43-205ENST00000592333 FAM208AQ9UK61 1670 aaKnown RBP26.44■■□□□ 1.82
CCDC43-205ENST00000592333 USP47Q96K76 1375 aa26.44■■□□□ 1.82
CCDC43-205ENST00000592333 CLSPNQ9HAW4 1339 aa26.43■■□□□ 1.82
CCDC43-205ENST00000592333 PTF1AQ7RTS3 328 aa26.43■■□□□ 1.82
CCDC43-205ENST00000592333 KCNQ2O43526 872 aa26.42■■□□□ 1.82
CCDC43-205ENST00000592333 PROM2Q8N271 834 aa26.42■■□□□ 1.82
CCDC43-205ENST00000592333 TXNRD1Q16881 649 aa26.4■■□□□ 1.82
CCDC43-205ENST00000592333 NHSQ6T4R5 1651 aa26.4■■□□□ 1.82
CCDC43-205ENST00000592333 RTL1A6NKG5 1358 aa26.38■■□□□ 1.81
CCDC43-205ENST00000592333 MAP3K19Q56UN5 1328 aa26.38■■□□□ 1.81
CCDC43-205ENST00000592333 HOXC9P31274 260 aa26.37■■□□□ 1.81
CCDC43-205ENST00000592333 ANO8Q9HCE9 1232 aaPredicted RBP26.36■■□□□ 1.81
CCDC43-205ENST00000592333 FYB1O15117 783 aa26.35■■□□□ 1.81
CCDC43-205ENST00000592333 AMPHP49418 695 aa26.35■■□□□ 1.81
CCDC43-205ENST00000592333 STK32BQ9NY57 414 aa26.34■■□□□ 1.81
CCDC43-205ENST00000592333 SLC15A2Q16348 729 aa26.33■■□□□ 1.81
CCDC43-205ENST00000592333 CASZ1Q86V15 1759 aa26.33■■□□□ 1.8
CCDC43-205ENST00000592333 KIF24Q5T7B8 1368 aa26.33■■□□□ 1.8
CCDC43-205ENST00000592333 PPP1R1BQ9UD71 204 aaPredicted RBP26.32■■□□□ 1.8
CCDC43-205ENST00000592333 LTV1Q96GA3 475 aaPredicted RBP26.3■■□□□ 1.8
CCDC43-205ENST00000592333 ACSBG1Q96GR2 724 aa26.3■■□□□ 1.8
CCDC43-205ENST00000592333 CGNL1Q0VF96 1302 aa26.3■■□□□ 1.8
CCDC43-205ENST00000592333 GGNBP2Q9H3C7 697 aa26.27■■□□□ 1.8
CCDC43-205ENST00000592333 SMG6Q86US8 1419 aaKnown RBP26.27■■□□□ 1.8
CCDC43-205ENST00000592333 BTAF1O14981 1849 aa26.25■■□□□ 1.79
CCDC43-205ENST00000592333 SLC27A3Q5K4L6 730 aa26.25■■□□□ 1.79
CCDC43-205ENST00000592333 ZCRB1Q8TBF4 217 aaKnown RBP26.25■■□□□ 1.79
CCDC43-205ENST00000592333 DDX54Q8TDD1 881 aaKnown RBP26.25■■□□□ 1.79
CCDC43-205ENST00000592333 INSRP06213 1382 aa26.24■■□□□ 1.79
CCDC43-205ENST00000592333 FBLN1P23142 703 aa26.24■■□□□ 1.79
CCDC43-205ENST00000592333 DCAF8L1A6NGE4 600 aa26.23■■□□□ 1.79
CCDC43-205ENST00000592333 RRS1Q15050 365 aaKnown RBP26.23■■□□□ 1.79
CCDC43-205ENST00000592333 FLT4P35916 1363 aa26.22■■□□□ 1.79
CCDC43-205ENST00000592333 PAPPAQ13219 1627 aa26.22■■□□□ 1.79
CCDC43-205ENST00000592333 MTFR1LQ9H019 292 aa26.22■■□□□ 1.79
CCDC43-205ENST00000592333 KIF20BQ96Q89 1820 aa26.22■■□□□ 1.79
CCDC43-205ENST00000592333 NBPF6Q5VWK0 638 aa26.21■■□□□ 1.79
CCDC43-205ENST00000592333 NBPF4Q96M43 638 aa26.21■■□□□ 1.79
CCDC43-205ENST00000592333 PTGER2P43116 358 aa26.2■■□□□ 1.78
CCDC43-205ENST00000592333 PDGFDQ9GZP0 370 aaPredicted RBP26.2■■□□□ 1.78
CCDC43-205ENST00000592333 ZBTB7AO95365 584 aa26.19■■□□□ 1.78
CCDC43-205ENST00000592333 RAPGEF4Q8WZA2 1011 aa26.19■■□□□ 1.78
CCDC43-205ENST00000592333 CARD14Q9BXL6 1004 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms