RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 LRRC37A3O60309 1634 aa21.29■■□□□ 1
ERCC1-211ENST00000590701 ZNF784Q8NCA9 323 aaPredicted RBP21.29■■□□□ 1
ERCC1-211ENST00000590701 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
ERCC1-211ENST00000590701 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
ERCC1-211ENST00000590701 COL18A1P39060 1754 aa21.28■■□□□ 1
ERCC1-211ENST00000590701 TXNRD1Q16881 649 aa21.27■■□□□ 1
ERCC1-211ENST00000590701 RGPD5Q99666 1765 aa21.27■■□□□ 1
ERCC1-211ENST00000590701 MYOM1P52179 1685 aa21.27■■□□□ 1
ERCC1-211ENST00000590701 SYT17Q9BSW7 474 aa21.26■□□□□ 0.99
ERCC1-211ENST00000590701 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
ERCC1-211ENST00000590701 STK32BQ9NY57 414 aa21.25■□□□□ 0.99
ERCC1-211ENST00000590701 WDR17Q8IZU2 1322 aa21.25■□□□□ 0.99
ERCC1-211ENST00000590701 CENPJQ9HC77 1338 aaPredicted RBP21.25■□□□□ 0.99
ERCC1-211ENST00000590701 SOX12O15370 315 aa21.24■□□□□ 0.99
ERCC1-211ENST00000590701 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
ERCC1-211ENST00000590701 USP6P35125 1406 aa21.23■□□□□ 0.99
ERCC1-211ENST00000590701 KIAA1210Q9ULL0 1709 aa21.23■□□□□ 0.99
ERCC1-211ENST00000590701 AKAP12Q02952 1782 aa21.23■□□□□ 0.99
ERCC1-211ENST00000590701 EXOC5O00471 708 aa21.22■□□□□ 0.99
ERCC1-211ENST00000590701 SLIT3O75094 1523 aa21.22■□□□□ 0.99
ERCC1-211ENST00000590701 BRD4O60885 1362 aaPredicted RBP21.22■□□□□ 0.99
ERCC1-211ENST00000590701 UTRNP46939 3433 aa21.21■□□□□ 0.99
ERCC1-211ENST00000590701 WNK3Q9BYP7 1800 aa21.21■□□□□ 0.99
ERCC1-211ENST00000590701 CSB-PGBD3P0DP91 1061 aa21.21■□□□□ 0.99
ERCC1-211ENST00000590701 ARHGEF25Q86VW2 580 aa21.21■□□□□ 0.99
ERCC1-211ENST00000590701 CDCA7Q9BWT1 371 aaPredicted RBP21.2■□□□□ 0.98
ERCC1-211ENST00000590701 CARD10Q9BWT7 1032 aa21.2■□□□□ 0.98
ERCC1-211ENST00000590701 SGIP1Q9BQI5 828 aa21.19■□□□□ 0.98
ERCC1-211ENST00000590701 CHD4Q14839 1912 aa21.19■□□□□ 0.98
ERCC1-211ENST00000590701 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
ERCC1-211ENST00000590701 ACSBG1Q96GR2 724 aa21.18■□□□□ 0.98
ERCC1-211ENST00000590701 MTFR1LQ9H019 292 aa21.18■□□□□ 0.98
ERCC1-211ENST00000590701 BCL9O00512 1426 aa21.18■□□□□ 0.98
ERCC1-211ENST00000590701 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
ERCC1-211ENST00000590701 QRICH2Q9H0J4 1663 aa21.16■□□□□ 0.98
ERCC1-211ENST00000590701 TTC21BQ7Z4L5 1316 aa21.16■□□□□ 0.98
ERCC1-211ENST00000590701 SENP3-EIF4A1A0A087X0R7 540 aa21.16■□□□□ 0.98
ERCC1-211ENST00000590701 CPSF1Q10570 1443 aaKnown RBP21.15■□□□□ 0.98
ERCC1-211ENST00000590701 C1QTNF8P60827 252 aa21.14■□□□□ 0.97
ERCC1-211ENST00000590701 KCNH5Q8NCM2 988 aa21.14■□□□□ 0.97
ERCC1-211ENST00000590701 ARXQ96QS3 562 aa21.14■□□□□ 0.97
ERCC1-211ENST00000590701 ZNF692Q9BU19 519 aaPredicted RBP21.11■□□□□ 0.97
ERCC1-211ENST00000590701 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
ERCC1-211ENST00000590701 GPR162Q16538 588 aa21.08■□□□□ 0.97
ERCC1-211ENST00000590701 ZNF827Q17R98 1081 aa21.08■□□□□ 0.97
ERCC1-211ENST00000590701 LRRC4BQ9NT99 713 aa21.08■□□□□ 0.97
ERCC1-211ENST00000590701 CCDC7Q96M83 1385 aa21.08■□□□□ 0.96
ERCC1-211ENST00000590701 NLRP2Q9NX02 1062 aa21.07■□□□□ 0.96
ERCC1-211ENST00000590701 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
ERCC1-211ENST00000590701 TTC21AQ8NDW8 1320 aa21.05■□□□□ 0.96
ERCC1-211ENST00000590701 KLHL34Q8N239 644 aa21.05■□□□□ 0.96
ERCC1-211ENST00000590701 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
ERCC1-211ENST00000590701 NFAT5O94916 1531 aa21.04■□□□□ 0.96
ERCC1-211ENST00000590701 BTAF1O14981 1849 aa21.04■□□□□ 0.96
ERCC1-211ENST00000590701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
ERCC1-211ENST00000590701 L3MBTL2Q969R5 705 aa21.04■□□□□ 0.96
ERCC1-211ENST00000590701 TRPM1Q7Z4N2 1603 aa21.04■□□□□ 0.96
ERCC1-211ENST00000590701 KTN1Q86UP2 1357 aaKnown RBP21.03■□□□□ 0.96
ERCC1-211ENST00000590701 PELP1Q8IZL8 1130 aaKnown RBP21.03■□□□□ 0.96
ERCC1-211ENST00000590701 IL2RBP14784 551 aa21.02■□□□□ 0.96
ERCC1-211ENST00000590701 PAPPAQ13219 1627 aa21.02■□□□□ 0.96
ERCC1-211ENST00000590701 KCNQ4P56696 695 aa21.01■□□□□ 0.95
ERCC1-211ENST00000590701 AKT1S1Q96B36 256 aa21.01■□□□□ 0.95
ERCC1-211ENST00000590701 MAP3K5Q99683 1374 aa21■□□□□ 0.95
ERCC1-211ENST00000590701 NME9Q86XW9 330 aa21■□□□□ 0.95
ERCC1-211ENST00000590701 ERBB3P21860 1342 aa21■□□□□ 0.95
ERCC1-211ENST00000590701 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
ERCC1-211ENST00000590701 DDX54Q8TDD1 881 aaKnown RBP20.98■□□□□ 0.95
ERCC1-211ENST00000590701 NLGN2Q8NFZ4 835 aa20.97■□□□□ 0.95
ERCC1-211ENST00000590701 ABCC6O95255 1503 aa20.97■□□□□ 0.95
ERCC1-211ENST00000590701 LTN1O94822 1766 aa20.96■□□□□ 0.95
ERCC1-211ENST00000590701 GIGYF1O75420 1035 aaPredicted RBP20.96■□□□□ 0.95
ERCC1-211ENST00000590701 SIN3AQ96ST3 1273 aa20.96■□□□□ 0.95
ERCC1-211ENST00000590701 PNPLA7Q6ZV29 1317 aa20.96■□□□□ 0.95
ERCC1-211ENST00000590701 POLD1P28340 1107 aa20.95■□□□□ 0.94
ERCC1-211ENST00000590701 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
ERCC1-211ENST00000590701 USP31Q70CQ4 1352 aa20.95■□□□□ 0.94
ERCC1-211ENST00000590701 TFCP2L1Q9NZI6 479 aa20.94■□□□□ 0.94
ERCC1-211ENST00000590701 MON2Q7Z3U7 1717 aa20.93■□□□□ 0.94
ERCC1-211ENST00000590701 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
ERCC1-211ENST00000590701 SLC27A3Q5K4L6 730 aa20.92■□□□□ 0.94
ERCC1-211ENST00000590701 IFFO2Q5TF58 517 aa20.92■□□□□ 0.94
ERCC1-211ENST00000590701 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
ERCC1-211ENST00000590701 SYTL4Q96C24 671 aaPredicted RBP20.92■□□□□ 0.94
ERCC1-211ENST00000590701 ROCK2O75116 1388 aaKnown RBP20.92■□□□□ 0.94
ERCC1-211ENST00000590701 PRIM1P49642 420 aaKnown RBP20.91■□□□□ 0.94
ERCC1-211ENST00000590701 GOLGB1Q14789 3259 aaKnown RBP20.91■□□□□ 0.94
ERCC1-211ENST00000590701 TUBGCP6Q96RT7 1819 aa20.91■□□□□ 0.94
ERCC1-211ENST00000590701 SLC12A5Q9H2X9 1139 aa20.91■□□□□ 0.94
ERCC1-211ENST00000590701 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
ERCC1-211ENST00000590701 YBX3P16989 372 aaKnown RBP eCLIP20.9■□□□□ 0.943e-8■□□□□ 9.1
ERCC1-211ENST00000590701 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
ERCC1-211ENST00000590701 QSER1Q2KHR3 1735 aa20.9■□□□□ 0.94
ERCC1-211ENST00000590701 SBNO2Q9Y2G9 1366 aa20.89■□□□□ 0.93
ERCC1-211ENST00000590701 CD163L1Q9NR16 1453 aa20.88■□□□□ 0.93
ERCC1-211ENST00000590701 SHANK3Q9BYB0 1731 aa20.88■□□□□ 0.93
ERCC1-211ENST00000590701 MSH5O43196 834 aa20.87■□□□□ 0.93
ERCC1-211ENST00000590701 IP6K1Q92551 441 aa20.87■□□□□ 0.93
ERCC1-211ENST00000590701 FBLN1P23142 703 aa20.86■□□□□ 0.93
ERCC1-211ENST00000590701 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms