RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 MON2Q7Z3U7 1717 aa25.43■■□□□ 1.66
PRKCSH-211ENST00000590098 WDR17Q8IZU2 1322 aa25.43■■□□□ 1.66
PRKCSH-211ENST00000590098 TMC1Q8TDI8 760 aa25.43■■□□□ 1.66
PRKCSH-211ENST00000590098 RGPD5Q99666 1765 aa25.42■■□□□ 1.66
PRKCSH-211ENST00000590098 CSB-PGBD3P0DP91 1061 aa25.41■■□□□ 1.66
PRKCSH-211ENST00000590098 DDB1Q16531 1140 aa25.41■■□□□ 1.66
PRKCSH-211ENST00000590098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.41■■□□□ 1.66
PRKCSH-211ENST00000590098 OVOS2A0A0G2JMS6 1433 aa25.39■■□□□ 1.66
PRKCSH-211ENST00000590098 OVOS2A0A0J9YW53 1432 aa25.39■■□□□ 1.66
PRKCSH-211ENST00000590098 OVOS2Q6IE36 1432 aa25.39■■□□□ 1.66
PRKCSH-211ENST00000590098 HDGFL2Q7Z4V5 671 aaPredicted RBP25.39■■□□□ 1.66
PRKCSH-211ENST00000590098 CDCA7Q9BWT1 371 aaPredicted RBP25.38■■□□□ 1.65
PRKCSH-211ENST00000590098 NFAT5O94916 1531 aa25.37■■□□□ 1.65
PRKCSH-211ENST00000590098 LRRC37A3O60309 1634 aa25.37■■□□□ 1.65
PRKCSH-211ENST00000590098 WNK3Q9BYP7 1800 aa25.37■■□□□ 1.65
PRKCSH-211ENST00000590098 PTF1AQ7RTS3 328 aa25.36■■□□□ 1.65
PRKCSH-211ENST00000590098 CARD10Q9BWT7 1032 aa25.36■■□□□ 1.65
PRKCSH-211ENST00000590098 SLC12A5Q9H2X9 1139 aa25.36■■□□□ 1.65
PRKCSH-211ENST00000590098 RREB1Q92766 1687 aa25.36■■□□□ 1.65
PRKCSH-211ENST00000590098 USP31Q70CQ4 1352 aa25.35■■□□□ 1.65
PRKCSH-211ENST00000590098 NBPF14Q5TI25 921 aa25.35■■□□□ 1.65
PRKCSH-211ENST00000590098 TERF2IPQ9NYB0 399 aa25.35■■□□□ 1.65
PRKCSH-211ENST00000590098 PEAK1Q9H792 1746 aa25.34■■□□□ 1.65
PRKCSH-211ENST00000590098 CD163L1Q9NR16 1453 aa25.34■■□□□ 1.65
PRKCSH-211ENST00000590098 TRIM26Q12899 539 aaPredicted RBP25.34■■□□□ 1.65
PRKCSH-211ENST00000590098 NME9Q86XW9 330 aa25.34■■□□□ 1.65
PRKCSH-211ENST00000590098 PUS7Q96PZ0 661 aaKnown RBP25.34■■□□□ 1.65
PRKCSH-211ENST00000590098 SBF2Q86WG5 1849 aa25.33■■□□□ 1.65
PRKCSH-211ENST00000590098 ABCC6O95255 1503 aa25.32■■□□□ 1.64
PRKCSH-211ENST00000590098 NUP188Q5SRE5 1749 aa25.32■■□□□ 1.64
PRKCSH-211ENST00000590098 MARCH10Q8NA82 808 aaPredicted RBP25.32■■□□□ 1.64
PRKCSH-211ENST00000590098 USP54Q70EL1 1684 aa25.32■■□□□ 1.64
PRKCSH-211ENST00000590098 EDC4Q6P2E9 1401 aaKnown RBP25.31■■□□□ 1.64
PRKCSH-211ENST00000590098 SLC24A1O60721 1099 aa25.3■■□□□ 1.64
PRKCSH-211ENST00000590098 CCDC7Q96M83 1385 aa25.3■■□□□ 1.64
PRKCSH-211ENST00000590098 LTN1O94822 1766 aa25.29■■□□□ 1.64
PRKCSH-211ENST00000590098 EXOC5O00471 708 aa25.29■■□□□ 1.64
PRKCSH-211ENST00000590098 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
PRKCSH-211ENST00000590098 BCL11BQ9C0K0 894 aaPredicted RBP25.28■■□□□ 1.64
PRKCSH-211ENST00000590098 A0A1W2PP64 1363 aa25.28■■□□□ 1.64
PRKCSH-211ENST00000590098 PLSCR1O15162 318 aa25.26■■□□□ 1.63
PRKCSH-211ENST00000590098 TESK2Q96S53 571 aa25.26■■□□□ 1.63
PRKCSH-211ENST00000590098 RGPD3A6NKT7 1758 aaPredicted RBP25.26■■□□□ 1.63
PRKCSH-211ENST00000590098 RGPD4Q7Z3J3 1758 aa25.26■■□□□ 1.63
PRKCSH-211ENST00000590098 NLRP2Q9NX02 1062 aa25.25■■□□□ 1.63
PRKCSH-211ENST00000590098 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
PRKCSH-211ENST00000590098 BCL9O00512 1426 aa25.24■■□□□ 1.63
PRKCSH-211ENST00000590098 ERBB3P21860 1342 aa25.24■■□□□ 1.63
PRKCSH-211ENST00000590098 PROM2Q8N271 834 aa25.24■■□□□ 1.63
PRKCSH-211ENST00000590098 ANKRD24Q8TF21 1146 aa25.21■■□□□ 1.63
PRKCSH-211ENST00000590098 TNS2Q63HR2 1409 aa25.2■■□□□ 1.62
PRKCSH-211ENST00000590098 ANO8Q9HCE9 1232 aaPredicted RBP25.19■■□□□ 1.62
PRKCSH-211ENST00000590098 IL2RBP14784 551 aa25.18■■□□□ 1.62
PRKCSH-211ENST00000590098 KCNQ2O43526 872 aa25.17■■□□□ 1.62
PRKCSH-211ENST00000590098 COG3Q96JB2 828 aa25.17■■□□□ 1.62
PRKCSH-211ENST00000590098 TMF1P82094 1093 aa25.16■■□□□ 1.62
PRKCSH-211ENST00000590098 IP6K1Q92551 441 aa25.16■■□□□ 1.62
PRKCSH-211ENST00000590098 PDGFDQ9GZP0 370 aaPredicted RBP25.15■■□□□ 1.62
PRKCSH-211ENST00000590098 KAT6BQ8WYB5 2073 aa25.15■■□□□ 1.62
PRKCSH-211ENST00000590098 SPON1Q9HCB6 807 aa25.14■■□□□ 1.62
PRKCSH-211ENST00000590098 USP47Q96K76 1375 aa25.14■■□□□ 1.61
PRKCSH-211ENST00000590098 FBLN1P23142 703 aa25.13■■□□□ 1.61
PRKCSH-211ENST00000590098 ANKRD36BQ8N2N9 1353 aa25.13■■□□□ 1.61
PRKCSH-211ENST00000590098 TXNRD1Q16881 649 aa25.12■■□□□ 1.61
PRKCSH-211ENST00000590098 LTV1Q96GA3 475 aaPredicted RBP25.12■■□□□ 1.61
PRKCSH-211ENST00000590098 FAM208AQ9UK61 1670 aaKnown RBP25.11■■□□□ 1.61
PRKCSH-211ENST00000590098 ACSBG1Q96GR2 724 aa25.11■■□□□ 1.61
PRKCSH-211ENST00000590098 PPP1R1BQ9UD71 204 aaPredicted RBP25.11■■□□□ 1.61
PRKCSH-211ENST00000590098 NHSQ6T4R5 1651 aa25.1■■□□□ 1.61
PRKCSH-211ENST00000590098 AMPHP49418 695 aa25.1■■□□□ 1.61
PRKCSH-211ENST00000590098 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
PRKCSH-211ENST00000590098 MAP3K19Q56UN5 1328 aa25.09■■□□□ 1.61
PRKCSH-211ENST00000590098 STK32BQ9NY57 414 aa25.08■■□□□ 1.61
PRKCSH-211ENST00000590098 HOXC9P31274 260 aa25.07■■□□□ 1.6
PRKCSH-211ENST00000590098 CASZ1Q86V15 1759 aa25.04■■□□□ 1.6
PRKCSH-211ENST00000590098 DDX54Q8TDD1 881 aaKnown RBP25.04■■□□□ 1.6
PRKCSH-211ENST00000590098 TIMELESSQ9UNS1 1208 aa25.04■■□□□ 1.6
PRKCSH-211ENST00000590098 BTAF1O14981 1849 aa25.03■■□□□ 1.6
PRKCSH-211ENST00000590098 FYB1O15117 783 aa25.03■■□□□ 1.6
PRKCSH-211ENST00000590098 ZBTB7AO95365 584 aa25.03■■□□□ 1.6
PRKCSH-211ENST00000590098 SLC15A2Q16348 729 aa25.03■■□□□ 1.6
PRKCSH-211ENST00000590098 GGNBP2Q9H3C7 697 aa25.03■■□□□ 1.6
PRKCSH-211ENST00000590098 RTL1A6NKG5 1358 aa25.01■■□□□ 1.59
PRKCSH-211ENST00000590098 RGPD2P0DJD1 1756 aa25■■□□□ 1.59
PRKCSH-211ENST00000590098 RRS1Q15050 365 aaKnown RBP25■■□□□ 1.59
PRKCSH-211ENST00000590098 ATF5Q9Y2D1 282 aaPredicted RBP25■■□□□ 1.59
PRKCSH-211ENST00000590098 PTGER2P43116 358 aa24.99■■□□□ 1.59
PRKCSH-211ENST00000590098 KIF20BQ96Q89 1820 aa24.99■■□□□ 1.59
PRKCSH-211ENST00000590098 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
PRKCSH-211ENST00000590098 CLSPNQ9HAW4 1339 aa24.97■■□□□ 1.59
PRKCSH-211ENST00000590098 DCAF8L1A6NGE4 600 aa24.97■■□□□ 1.59
PRKCSH-211ENST00000590098 SMG6Q86US8 1419 aaKnown RBP24.96■■□□□ 1.59
PRKCSH-211ENST00000590098 ZCRB1Q8TBF4 217 aaKnown RBP24.96■■□□□ 1.59
PRKCSH-211ENST00000590098 LRRC4BQ9NT99 713 aa24.96■■□□□ 1.59
PRKCSH-211ENST00000590098 SYTL4Q96C24 671 aaPredicted RBP24.94■■□□□ 1.58
PRKCSH-211ENST00000590098 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
PRKCSH-211ENST00000590098 NBPF4Q96M43 638 aa24.93■■□□□ 1.58
PRKCSH-211ENST00000590098 ZNF827Q17R98 1081 aa24.92■■□□□ 1.58
PRKCSH-211ENST00000590098 RAPGEF4Q8WZA2 1011 aa24.92■■□□□ 1.58
PRKCSH-211ENST00000590098 MEGF6O75095 1541 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms