RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 HIC1Q14526 733 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 TRIM47Q96LD4 638 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-220ENST00000589351 ARHGAP5Q13017 1502 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 TROQ12816 1431 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-220ENST00000589351 UHRF1BP1Q6BDS2 1440 aa9.03□□□□□ -0.96
DNMT1-220ENST00000589351 ARHGEF12Q9NZN5 1544 aa9.02□□□□□ -0.97
DNMT1-220ENST00000589351 PREX1Q8TCU6 1659 aa9.02□□□□□ -0.97
DNMT1-220ENST00000589351 GCGRP47871 477 aa9.02□□□□□ -0.97
DNMT1-220ENST00000589351 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
DNMT1-220ENST00000589351 MSS51Q4VC12 460 aa9.01□□□□□ -0.97
DNMT1-220ENST00000589351 TRIM32Q13049 653 aa9□□□□□ -0.97
DNMT1-220ENST00000589351 MRGPRX2Q96LB1 330 aa9□□□□□ -0.97
DNMT1-220ENST00000589351 SENP2Q9HC62 589 aa9□□□□□ -0.97
DNMT1-220ENST00000589351 ARHGAP35Q9NRY4 1499 aa9□□□□□ -0.97
DNMT1-220ENST00000589351 HPS1Q92902 700 aa8.99□□□□□ -0.97
DNMT1-220ENST00000589351 MLH3Q9UHC1 1453 aa8.99□□□□□ -0.97
DNMT1-220ENST00000589351 SIGLEC1Q9BZZ2 1709 aa8.99□□□□□ -0.97
DNMT1-220ENST00000589351 CCDC18Q5T9S5 1454 aa8.98□□□□□ -0.97
DNMT1-220ENST00000589351 KDM5CP41229 1560 aa8.98□□□□□ -0.97
DNMT1-220ENST00000589351 PTPRTO14522 1441 aa8.97□□□□□ -0.97
DNMT1-220ENST00000589351 CNTLNQ9NXG0 1405 aa8.97□□□□□ -0.97
DNMT1-220ENST00000589351 TRAPPC8Q9Y2L5 1435 aa8.97□□□□□ -0.97
DNMT1-220ENST00000589351 RBM26Q5T8P6 1007 aaKnown RBP8.97□□□□□ -0.97
DNMT1-220ENST00000589351 ZNF777Q9ULD5 760 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-220ENST00000589351 REREQ9P2R6 1566 aa8.97□□□□□ -0.97
DNMT1-220ENST00000589351 DISP3Q9P2K9 1392 aa8.97□□□□□ -0.97
DNMT1-220ENST00000589351 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
DNMT1-220ENST00000589351 CASKIN1Q8WXD9 1431 aa8.96□□□□□ -0.98
DNMT1-220ENST00000589351 AGLP35573 1532 aa8.95□□□□□ -0.98
DNMT1-220ENST00000589351 DIP2CQ9Y2E4 1556 aa8.95□□□□□ -0.98
DNMT1-220ENST00000589351 CDC42BPBQ9Y5S2 1711 aa8.95□□□□□ -0.98
DNMT1-220ENST00000589351 GNPATO15228 680 aa8.95□□□□□ -0.98
DNMT1-220ENST00000589351 SULF1Q8IWU6 871 aa8.95□□□□□ -0.98
DNMT1-220ENST00000589351 SPAG9O60271 1321 aaKnown RBP8.95□□□□□ -0.98
DNMT1-220ENST00000589351 MMP16P51512 607 aa8.94□□□□□ -0.98
DNMT1-220ENST00000589351 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
DNMT1-220ENST00000589351 STRCQ7RTU9 1775 aa8.94□□□□□ -0.98
DNMT1-220ENST00000589351 GPR37O15354 613 aa8.93□□□□□ -0.98
DNMT1-220ENST00000589351 HNRNPMP52272 730 aaKnown RBP eCLIP8.93□□□□□ -0.98
DNMT1-220ENST00000589351 CFDP1Q9UEE9 299 aaPredicted RBP8.93□□□□□ -0.98
DNMT1-220ENST00000589351 PREX2Q70Z35 1606 aa8.93□□□□□ -0.98
DNMT1-220ENST00000589351 C3P01024 1663 aa8.93□□□□□ -0.98
DNMT1-220ENST00000589351 ABCA6Q8N139 1617 aa8.92□□□□□ -0.98
DNMT1-220ENST00000589351 ABCC1P33527 1531 aa8.92□□□□□ -0.98
DNMT1-220ENST00000589351 ZMYM3Q14202 1370 aa8.92□□□□□ -0.98
DNMT1-220ENST00000589351 SOCS7O14512 581 aa8.92□□□□□ -0.98
DNMT1-220ENST00000589351 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
DNMT1-220ENST00000589351 ITSN2Q9NZM3 1697 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 IQSEC2Q5JU85 1478 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 PLEKHH2Q8IVE3 1493 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 NPATQ14207 1427 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 SKOR1P84550 965 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 Q3C1V9 767 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 GRIPAP1Q4V328 841 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 GGT6Q6P531 493 aa8.91□□□□□ -0.98
DNMT1-220ENST00000589351 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
DNMT1-220ENST00000589351 CCNB3Q8WWL7 1395 aa8.9□□□□□ -0.98
DNMT1-220ENST00000589351 DXOO77932 396 aaKnown RBP8.9□□□□□ -0.98
DNMT1-220ENST00000589351 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
DNMT1-220ENST00000589351 KIDINS220Q9ULH0 1771 aa8.9□□□□□ -0.98
DNMT1-220ENST00000589351 LRRIQ1Q96JM4 1722 aa8.9□□□□□ -0.98
DNMT1-220ENST00000589351 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
DNMT1-220ENST00000589351 KIAA1107Q9UPP5 1409 aa8.89□□□□□ -0.99
DNMT1-220ENST00000589351 CDC42BPAQ5VT25 1732 aa8.89□□□□□ -0.99
DNMT1-220ENST00000589351 GMPRP36959 345 aa8.89□□□□□ -0.99
DNMT1-220ENST00000589351 SLC16A10Q8TF71 515 aa8.89□□□□□ -0.99
DNMT1-220ENST00000589351 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
DNMT1-220ENST00000589351 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 MTUS2Q5JR59 1369 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 MROH2AA6NES4 1674 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 SAMD9LQ8IVG5 1584 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 TESPA1A2RU30 521 aaPredicted RBP8.88□□□□□ -0.99
DNMT1-220ENST00000589351 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 ILDR2Q71H61 639 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 CCDC24Q8N4L8 307 aa8.88□□□□□ -0.99
DNMT1-220ENST00000589351 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
DNMT1-220ENST00000589351 CAMSAP1Q5T5Y3 1602 aa8.87□□□□□ -0.99
DNMT1-220ENST00000589351 GPATCH8Q9UKJ3 1502 aaKnown RBP8.87□□□□□ -0.99
DNMT1-220ENST00000589351 FAM181BA6NEQ2 426 aa8.87□□□□□ -0.99
DNMT1-220ENST00000589351 SUPT6HQ7KZ85 1726 aaKnown RBP8.87□□□□□ -0.99
DNMT1-220ENST00000589351 A2MP01023 1474 aa8.87□□□□□ -0.99
DNMT1-220ENST00000589351 SYCP2Q9BX26 1530 aa8.86□□□□□ -0.99
DNMT1-220ENST00000589351 ALDH1A1P00352 501 aa8.86□□□□□ -0.99
DNMT1-220ENST00000589351 WNT7BP56706 349 aa8.86□□□□□ -0.99
DNMT1-220ENST00000589351 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
DNMT1-220ENST00000589351 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
DNMT1-220ENST00000589351 LTBP4Q8N2S1 1624 aa8.86□□□□□ -0.99
DNMT1-220ENST00000589351 ATP7AQ04656 1500 aa8.85□□□□□ -0.99
DNMT1-220ENST00000589351 LOC100996750A0A140TA64 210 aa8.85□□□□□ -0.99
DNMT1-220ENST00000589351 BCANQ96GW7 911 aa8.85□□□□□ -0.99
DNMT1-220ENST00000589351 KRTAP4-6Q9BYQ5 205 aa8.85□□□□□ -0.99
DNMT1-220ENST00000589351 ZNF335Q9H4Z2 1342 aaPredicted RBP8.84□□□□□ -0.99
DNMT1-220ENST00000589351 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
DNMT1-220ENST00000589351 TOM1O60784 492 aa8.84□□□□□ -0.99
DNMT1-220ENST00000589351 BMP1P13497 986 aa8.84□□□□□ -0.99
DNMT1-220ENST00000589351 CD46P15529 392 aa8.84□□□□□ -0.99
DNMT1-220ENST00000589351 VEGFBP49765 207 aa8.84□□□□□ -0.99
DNMT1-220ENST00000589351 PLCB2Q00722 1185 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms