RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 ARHGEF25Q86VW2 580 aa22.54■■□□□ 1.2
TMEM259-206ENST00000589055 USP54Q70EL1 1684 aa22.53■■□□□ 1.2
TMEM259-206ENST00000589055 HDGFL2Q7Z4V5 671 aaPredicted RBP22.53■■□□□ 1.2
TMEM259-206ENST00000589055 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
TMEM259-206ENST00000589055 EDC4Q6P2E9 1401 aaKnown RBP22.51■■□□□ 1.19
TMEM259-206ENST00000589055 EN1Q05925 392 aaPredicted RBP22.51■■□□□ 1.19
TMEM259-206ENST00000589055 IFFO2Q5TF58 517 aa22.51■■□□□ 1.19
TMEM259-206ENST00000589055 KCNH5Q8NCM2 988 aa22.51■■□□□ 1.19
TMEM259-206ENST00000589055 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
TMEM259-206ENST00000589055 DISP2A7MBM2 1401 aa22.5■■□□□ 1.19
TMEM259-206ENST00000589055 WNK3Q9BYP7 1800 aa22.5■■□□□ 1.19
TMEM259-206ENST00000589055 LRRC37A3O60309 1634 aa22.49■■□□□ 1.19
TMEM259-206ENST00000589055 TOM1L2Q6ZVM7 507 aa22.49■■□□□ 1.19
TMEM259-206ENST00000589055 TRIM37O94972 964 aa22.48■■□□□ 1.19
TMEM259-206ENST00000589055 PDE3BQ13370 1112 aa22.48■■□□□ 1.19
TMEM259-206ENST00000589055 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
TMEM259-206ENST00000589055 TERF2IPQ9NYB0 399 aa22.48■■□□□ 1.19
TMEM259-206ENST00000589055 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
TMEM259-206ENST00000589055 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
TMEM259-206ENST00000589055 LTN1O94822 1766 aa22.47■■□□□ 1.19
TMEM259-206ENST00000589055 OVOS2A0A0J9YW53 1432 aa22.47■■□□□ 1.19
TMEM259-206ENST00000589055 OVOS2Q6IE36 1432 aa22.47■■□□□ 1.19
TMEM259-206ENST00000589055 CSB-PGBD3P0DP91 1061 aa22.45■■□□□ 1.18
TMEM259-206ENST00000589055 FAM196AQ6ZSG2 479 aa22.45■■□□□ 1.18
TMEM259-206ENST00000589055 DCAF8L1A6NGE4 600 aa22.44■■□□□ 1.18
TMEM259-206ENST00000589055 NINLQ9Y2I6 1382 aa22.44■■□□□ 1.18
TMEM259-206ENST00000589055 ABCC6O95255 1503 aa22.43■■□□□ 1.18
TMEM259-206ENST00000589055 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
TMEM259-206ENST00000589055 PEAK1Q9H792 1746 aa22.43■■□□□ 1.18
TMEM259-206ENST00000589055 TMF1P82094 1093 aa22.42■■□□□ 1.18
TMEM259-206ENST00000589055 EZH2Q15910 746 aaKnown RBP22.41■■□□□ 1.18
TMEM259-206ENST00000589055 ANKRD36BQ8N2N9 1353 aa22.4■■□□□ 1.18
TMEM259-206ENST00000589055 DDB1Q16531 1140 aa22.39■■□□□ 1.17
TMEM259-206ENST00000589055 CARD10Q9BWT7 1032 aa22.39■■□□□ 1.17
TMEM259-206ENST00000589055 SENP3-EIF4A1A0A087X0R7 540 aa22.38■■□□□ 1.17
TMEM259-206ENST00000589055 APBA3O96018 575 aa22.38■■□□□ 1.17
TMEM259-206ENST00000589055 FBLN1P23142 703 aa22.38■■□□□ 1.17
TMEM259-206ENST00000589055 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
TMEM259-206ENST00000589055 MYOM1P52179 1685 aa22.38■■□□□ 1.17
TMEM259-206ENST00000589055 OVOS2A0A0G2JMS6 1433 aa22.38■■□□□ 1.17
TMEM259-206ENST00000589055 ERBB3P21860 1342 aa22.37■■□□□ 1.17
TMEM259-206ENST00000589055 CCER1Q8TC90 406 aaPredicted RBP22.37■■□□□ 1.17
TMEM259-206ENST00000589055 CAMKK2Q96RR4 588 aa22.37■■□□□ 1.17
TMEM259-206ENST00000589055 SLC24A1O60721 1099 aa22.36■■□□□ 1.17
TMEM259-206ENST00000589055 RREB1Q92766 1687 aa22.36■■□□□ 1.17
TMEM259-206ENST00000589055 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
TMEM259-206ENST00000589055 PPP1R1BQ9UD71 204 aaPredicted RBP22.35■■□□□ 1.17
TMEM259-206ENST00000589055 SBF2Q86WG5 1849 aa22.35■■□□□ 1.17
TMEM259-206ENST00000589055 PARD3Q8TEW0 1356 aa22.35■■□□□ 1.17
TMEM259-206ENST00000589055 MARCH10Q8NA82 808 aaPredicted RBP22.34■■□□□ 1.17
TMEM259-206ENST00000589055 ANKRD24Q8TF21 1146 aa22.34■■□□□ 1.17
TMEM259-206ENST00000589055 COG3Q96JB2 828 aa22.34■■□□□ 1.17
TMEM259-206ENST00000589055 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
TMEM259-206ENST00000589055 PTF1AQ7RTS3 328 aa22.33■■□□□ 1.17
TMEM259-206ENST00000589055 NUP188Q5SRE5 1749 aa22.32■■□□□ 1.16
TMEM259-206ENST00000589055 GGNBP2Q9H3C7 697 aa22.32■■□□□ 1.16
TMEM259-206ENST00000589055 LTV1Q96GA3 475 aaPredicted RBP22.31■■□□□ 1.16
TMEM259-206ENST00000589055 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
TMEM259-206ENST00000589055 KIF20BQ96Q89 1820 aa22.31■■□□□ 1.16
TMEM259-206ENST00000589055 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
TMEM259-206ENST00000589055 MAP3K19Q56UN5 1328 aa22.31■■□□□ 1.16
TMEM259-206ENST00000589055 FYB1O15117 783 aa22.29■■□□□ 1.16
TMEM259-206ENST00000589055 ZNF784Q8NCA9 323 aaPredicted RBP22.29■■□□□ 1.16
TMEM259-206ENST00000589055 IP6K1Q92551 441 aa22.29■■□□□ 1.16
TMEM259-206ENST00000589055 RRS1Q15050 365 aaKnown RBP22.28■■□□□ 1.16
TMEM259-206ENST00000589055 CDCA8Q53HL2 280 aa22.28■■□□□ 1.16
TMEM259-206ENST00000589055 SPON1Q9HCB6 807 aa22.28■■□□□ 1.16
TMEM259-206ENST00000589055 EXOC5O00471 708 aa22.27■■□□□ 1.16
TMEM259-206ENST00000589055 NSD3Q9BZ95 1437 aa22.26■■□□□ 1.15
TMEM259-206ENST00000589055 RGPD2P0DJD1 1756 aa22.26■■□□□ 1.15
TMEM259-206ENST00000589055 HOXC9P31274 260 aa22.26■■□□□ 1.15
TMEM259-206ENST00000589055 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
TMEM259-206ENST00000589055 IL2RBP14784 551 aa22.25■■□□□ 1.15
TMEM259-206ENST00000589055 AMPHP49418 695 aa22.25■■□□□ 1.15
TMEM259-206ENST00000589055 POLR3GLQ9BT43 218 aa22.25■■□□□ 1.15
TMEM259-206ENST00000589055 FAM208AQ9UK61 1670 aaKnown RBP22.25■■□□□ 1.15
TMEM259-206ENST00000589055 NBPF14Q5TI25 921 aa22.24■■□□□ 1.15
TMEM259-206ENST00000589055 BCL9O00512 1426 aa22.23■■□□□ 1.15
TMEM259-206ENST00000589055 C11orf95C9JLR9 678 aaPredicted RBP22.23■■□□□ 1.15
TMEM259-206ENST00000589055 HSPA5P11021 654 aaKnown RBP22.23■■□□□ 1.15
TMEM259-206ENST00000589055 KCNQ2O43526 872 aa22.22■■□□□ 1.15
TMEM259-206ENST00000589055 C1QTNF8P60827 252 aa22.22■■□□□ 1.15
TMEM259-206ENST00000589055 BCL11BQ9C0K0 894 aaPredicted RBP22.22■■□□□ 1.15
TMEM259-206ENST00000589055 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
TMEM259-206ENST00000589055 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
TMEM259-206ENST00000589055 ACSBG1Q96GR2 724 aa22.21■■□□□ 1.15
TMEM259-206ENST00000589055 RTL1A6NKG5 1358 aa22.21■■□□□ 1.15
TMEM259-206ENST00000589055 NHSQ6T4R5 1651 aa22.2■■□□□ 1.14
TMEM259-206ENST00000589055 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
TMEM259-206ENST00000589055 MEGF6O75095 1541 aa22.17■■□□□ 1.14
TMEM259-206ENST00000589055 USHBP1Q8N6Y0 703 aa22.17■■□□□ 1.14
TMEM259-206ENST00000589055 PLSCR1O15162 318 aa22.16■■□□□ 1.14
TMEM259-206ENST00000589055 PROM2Q8N271 834 aa22.16■■□□□ 1.14
TMEM259-206ENST00000589055 ANO8Q9HCE9 1232 aaPredicted RBP22.16■■□□□ 1.14
TMEM259-206ENST00000589055 SHANK3Q9BYB0 1731 aa22.16■■□□□ 1.14
TMEM259-206ENST00000589055 UTRNP46939 3433 aa22.15■■□□□ 1.14
TMEM259-206ENST00000589055 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
TMEM259-206ENST00000589055 NBPF6Q5VWK0 638 aa22.15■■□□□ 1.14
TMEM259-206ENST00000589055 NBPF4Q96M43 638 aa22.15■■□□□ 1.14
TMEM259-206ENST00000589055 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms