RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 HSPA5P11021 654 aaKnown RBP21.6■■□□□ 1.05
GCDH-208ENST00000588905 NME9Q86XW9 330 aa21.6■■□□□ 1.05
GCDH-208ENST00000588905 AATKQ6ZMQ8 1374 aa21.6■■□□□ 1.05
GCDH-208ENST00000588905 USP31Q70CQ4 1352 aa21.6■■□□□ 1.05
GCDH-208ENST00000588905 ARHGEF25Q86VW2 580 aa21.59■■□□□ 1.05
GCDH-208ENST00000588905 COL5A2P05997 1499 aaPredicted RBP21.58■■□□□ 1.05
GCDH-208ENST00000588905 SOX12O15370 315 aa21.58■■□□□ 1.05
GCDH-208ENST00000588905 LARP1Q6PKG0 1096 aaKnown RBP21.58■■□□□ 1.05
GCDH-208ENST00000588905 NUP188Q5SRE5 1749 aa21.58■■□□□ 1.04
GCDH-208ENST00000588905 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.04
GCDH-208ENST00000588905 PEAK1Q9H792 1746 aa21.58■■□□□ 1.04
GCDH-208ENST00000588905 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
GCDH-208ENST00000588905 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
GCDH-208ENST00000588905 LRRC37A3O60309 1634 aa21.56■■□□□ 1.04
GCDH-208ENST00000588905 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
GCDH-208ENST00000588905 ANKRD36BQ8N2N9 1353 aa21.55■■□□□ 1.04
GCDH-208ENST00000588905 BAG6P46379 1132 aa21.54■■□□□ 1.04
GCDH-208ENST00000588905 EN1Q05925 392 aaPredicted RBP21.54■■□□□ 1.04
GCDH-208ENST00000588905 BARGINQ6ZT62 677 aa21.54■■□□□ 1.04
GCDH-208ENST00000588905 TCP11L2Q8N4U5 519 aa21.54■■□□□ 1.04
GCDH-208ENST00000588905 AXIN2Q9Y2T1 843 aa21.54■■□□□ 1.04
GCDH-208ENST00000588905 PSDA5PKW4 1024 aaPredicted RBP21.52■■□□□ 1.04
GCDH-208ENST00000588905 THRAP3Q9Y2W1 955 aaKnown RBP21.52■■□□□ 1.04
GCDH-208ENST00000588905 USP54Q70EL1 1684 aa21.52■■□□□ 1.04
GCDH-208ENST00000588905 NFAT5O94916 1531 aa21.5■■□□□ 1.03
GCDH-208ENST00000588905 CRB1P82279 1406 aa21.49■■□□□ 1.03
GCDH-208ENST00000588905 TOM1L2Q6ZVM7 507 aa21.49■■□□□ 1.03
GCDH-208ENST00000588905 COG3Q96JB2 828 aa21.49■■□□□ 1.03
GCDH-208ENST00000588905 WDR17Q8IZU2 1322 aa21.49■■□□□ 1.03
GCDH-208ENST00000588905 OVOS2A0A0J9YW53 1432 aa21.48■■□□□ 1.03
GCDH-208ENST00000588905 OVOS2Q6IE36 1432 aa21.48■■□□□ 1.03
GCDH-208ENST00000588905 C11orf95C9JLR9 678 aaPredicted RBP21.47■■□□□ 1.03
GCDH-208ENST00000588905 TRIM37O94972 964 aa21.47■■□□□ 1.03
GCDH-208ENST00000588905 EZH2Q15910 746 aaKnown RBP21.47■■□□□ 1.03
GCDH-208ENST00000588905 CSB-PGBD3P0DP91 1061 aa21.46■■□□□ 1.03
GCDH-208ENST00000588905 CAMKK2Q96RR4 588 aa21.46■■□□□ 1.03
GCDH-208ENST00000588905 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
GCDH-208ENST00000588905 CARD14Q9BXL6 1004 aa21.46■■□□□ 1.03
GCDH-208ENST00000588905 RGPD3A6NKT7 1758 aaPredicted RBP21.46■■□□□ 1.03
GCDH-208ENST00000588905 RGPD4Q7Z3J3 1758 aa21.46■■□□□ 1.03
GCDH-208ENST00000588905 FYB1O15117 783 aa21.45■■□□□ 1.02
GCDH-208ENST00000588905 PDE3BQ13370 1112 aa21.45■■□□□ 1.02
GCDH-208ENST00000588905 LTN1O94822 1766 aa21.44■■□□□ 1.02
GCDH-208ENST00000588905 FAM196AQ6ZSG2 479 aa21.44■■□□□ 1.02
GCDH-208ENST00000588905 CARD10Q9BWT7 1032 aa21.44■■□□□ 1.02
GCDH-208ENST00000588905 ABCC6O95255 1503 aa21.43■■□□□ 1.02
GCDH-208ENST00000588905 GGNBP2Q9H3C7 697 aa21.42■■□□□ 1.02
GCDH-208ENST00000588905 R3HDM1Q15032 1099 aaKnown RBP21.41■■□□□ 1.02
GCDH-208ENST00000588905 IP6K1Q92551 441 aa21.4■■□□□ 1.02
GCDH-208ENST00000588905 CDCA7Q9BWT1 371 aaPredicted RBP21.4■■□□□ 1.02
GCDH-208ENST00000588905 PARD3Q8TEW0 1356 aa21.39■■□□□ 1.02
GCDH-208ENST00000588905 ERBB3P21860 1342 aa21.39■■□□□ 1.01
GCDH-208ENST00000588905 MAP3K19Q56UN5 1328 aa21.38■■□□□ 1.01
GCDH-208ENST00000588905 FBLN1P23142 703 aa21.38■■□□□ 1.01
GCDH-208ENST00000588905 ANKRD24Q8TF21 1146 aa21.38■■□□□ 1.01
GCDH-208ENST00000588905 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
GCDH-208ENST00000588905 CCDC7Q96M83 1385 aa21.37■■□□□ 1.01
GCDH-208ENST00000588905 APBA3O96018 575 aa21.37■■□□□ 1.01
GCDH-208ENST00000588905 DDB1Q16531 1140 aa21.37■■□□□ 1.01
GCDH-208ENST00000588905 NLRP2Q9NX02 1062 aa21.37■■□□□ 1.01
GCDH-208ENST00000588905 OVOS2A0A0G2JMS6 1433 aa21.37■■□□□ 1.01
GCDH-208ENST00000588905 AMPHP49418 695 aa21.36■■□□□ 1.01
GCDH-208ENST00000588905 PANK3Q9H999 370 aa21.35■■□□□ 1.01
GCDH-208ENST00000588905 HOXC9P31274 260 aa21.34■■□□□ 1.01
GCDH-208ENST00000588905 PTF1AQ7RTS3 328 aa21.34■■□□□ 1.01
GCDH-208ENST00000588905 MYOM1P52179 1685 aa21.34■■□□□ 1.01
GCDH-208ENST00000588905 CASZ1Q86V15 1759 aa21.33■■□□□ 1.01
GCDH-208ENST00000588905 CGNL1Q0VF96 1302 aa21.33■■□□□ 1.01
GCDH-208ENST00000588905 KIF7Q2M1P5 1343 aa21.33■■□□□ 1.01
GCDH-208ENST00000588905 RRS1Q15050 365 aaKnown RBP21.33■■□□□ 1.01
GCDH-208ENST00000588905 EXOC5O00471 708 aa21.32■■□□□ 1
GCDH-208ENST00000588905 LTV1Q96GA3 475 aaPredicted RBP21.32■■□□□ 1
GCDH-208ENST00000588905 RTL1A6NKG5 1358 aa21.3■■□□□ 1
GCDH-208ENST00000588905 NHSQ6T4R5 1651 aa21.3■■□□□ 1
GCDH-208ENST00000588905 BCL9O00512 1426 aa21.29■■□□□ 1
GCDH-208ENST00000588905 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
GCDH-208ENST00000588905 IL2RBP14784 551 aa21.28■■□□□ 1
GCDH-208ENST00000588905 RGPD2P0DJD1 1756 aa21.27■■□□□ 1
GCDH-208ENST00000588905 TNS2Q63HR2 1409 aa21.27■■□□□ 1
GCDH-208ENST00000588905 KIF24Q5T7B8 1368 aa21.25■□□□□ 0.99
GCDH-208ENST00000588905 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
GCDH-208ENST00000588905 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
GCDH-208ENST00000588905 HSP90AB2PQ58FF8 381 aa21.24■□□□□ 0.99
GCDH-208ENST00000588905 ANO8Q9HCE9 1232 aaPredicted RBP21.24■□□□□ 0.99
GCDH-208ENST00000588905 BTAF1O14981 1849 aa21.24■□□□□ 0.99
GCDH-208ENST00000588905 KIF20BQ96Q89 1820 aa21.24■□□□□ 0.99
GCDH-208ENST00000588905 INSRP06213 1382 aa21.23■□□□□ 0.99
GCDH-208ENST00000588905 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
GCDH-208ENST00000588905 SHANK3Q9BYB0 1731 aa21.23■□□□□ 0.99
GCDH-208ENST00000588905 FLT4P35916 1363 aa21.23■□□□□ 0.99
GCDH-208ENST00000588905 PAPPAQ13219 1627 aa21.22■□□□□ 0.99
GCDH-208ENST00000588905 NBPF6Q5VWK0 638 aa21.21■□□□□ 0.99
GCDH-208ENST00000588905 PROM2Q8N271 834 aa21.21■□□□□ 0.99
GCDH-208ENST00000588905 NBPF4Q96M43 638 aa21.21■□□□□ 0.99
GCDH-208ENST00000588905 BCL11BQ9C0K0 894 aaPredicted RBP21.21■□□□□ 0.99
GCDH-208ENST00000588905 KNSTRNQ9Y448 316 aa21.21■□□□□ 0.99
GCDH-208ENST00000588905 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
GCDH-208ENST00000588905 PLSCR1O15162 318 aa21.2■□□□□ 0.98
GCDH-208ENST00000588905 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
GCDH-208ENST00000588905 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms